RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 CASP7P55210 303 aa20.02■□□□□ 0.8
CHMP4A-207ENST00000533523 SREBF2Q12772 1141 aa20.02■□□□□ 0.8
CHMP4A-207ENST00000533523 FBXO46Q6PJ61 603 aaPredicted RBP20.02■□□□□ 0.8
CHMP4A-207ENST00000533523 FAM9BQ8IZU0 186 aa20.02■□□□□ 0.8
CHMP4A-207ENST00000533523 CHMP3Q9Y3E7 222 aa20.02■□□□□ 0.8
CHMP4A-207ENST00000533523 IL16Q14005 1332 aa20.02■□□□□ 0.79
CHMP4A-207ENST00000533523 FANCIQ9NVI1 1328 aa20.02■□□□□ 0.79
CHMP4A-207ENST00000533523 SSC5DA1L4H1 1573 aa20.01■□□□□ 0.79
CHMP4A-207ENST00000533523 ANKRD18BA2A2Z9 1011 aa20.01■□□□□ 0.79
CHMP4A-207ENST00000533523 MMP14P50281 582 aa20.01■□□□□ 0.79
CHMP4A-207ENST00000533523 PTPN12Q05209 780 aaKnown RBP20.01■□□□□ 0.79
CHMP4A-207ENST00000533523 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.01■□□□□ 0.79
CHMP4A-207ENST00000533523 FXR1P51114 621 aaKnown RBP eCLIP20■□□□□ 0.79
CHMP4A-207ENST00000533523 PKN2Q16513 984 aaKnown RBP20■□□□□ 0.79
CHMP4A-207ENST00000533523 LINS1Q8NG48 757 aa20■□□□□ 0.79
CHMP4A-207ENST00000533523 ANGEL1Q9UNK9 670 aaKnown RBP20■□□□□ 0.79
CHMP4A-207ENST00000533523 FZD1Q9UP38 647 aa20■□□□□ 0.79
CHMP4A-207ENST00000533523 SNAP23O00161 211 aa19.99■□□□□ 0.79
CHMP4A-207ENST00000533523 CSF1RP07333 972 aa19.99■□□□□ 0.79
CHMP4A-207ENST00000533523 DLGAP5Q15398 846 aa19.99■□□□□ 0.79
CHMP4A-207ENST00000533523 NOM1Q5C9Z4 860 aaKnown RBP19.99■□□□□ 0.79
CHMP4A-207ENST00000533523 HELBQ8NG08 1087 aaPredicted RBP19.99■□□□□ 0.79
CHMP4A-207ENST00000533523 CD209Q9NNX6 404 aa19.99■□□□□ 0.79
CHMP4A-207ENST00000533523 ZSWIM8A7E2V4 1837 aa19.99■□□□□ 0.79
CHMP4A-207ENST00000533523 TAF5LO75529 589 aa19.98■□□□□ 0.79
CHMP4A-207ENST00000533523 IFIT5Q13325 482 aaKnown RBP19.98■□□□□ 0.79
CHMP4A-207ENST00000533523 ZNF804AQ7Z570 1209 aa19.98■□□□□ 0.79
CHMP4A-207ENST00000533523 ZBED3Q96IU2 234 aaPredicted RBP19.98■□□□□ 0.79
CHMP4A-207ENST00000533523 CFHR5Q9BXR6 569 aa19.98■□□□□ 0.79
CHMP4A-207ENST00000533523 F8W031 263 aaPredicted RBP19.97■□□□□ 0.79
CHMP4A-207ENST00000533523 SPRYD7Q5W111 196 aa19.97■□□□□ 0.79
CHMP4A-207ENST00000533523 CERS5Q8N5B7 392 aa19.97■□□□□ 0.79
CHMP4A-207ENST00000533523 DEFB129Q9H1M3 183 aa19.97■□□□□ 0.79
CHMP4A-207ENST00000533523 WDR63Q8IWG1 891 aa19.96■□□□□ 0.79
CHMP4A-207ENST00000533523 JAG2Q9Y219 1238 aa19.96■□□□□ 0.79
CHMP4A-207ENST00000533523 SALL2Q9Y467 1007 aaPredicted RBP19.96■□□□□ 0.79
CHMP4A-207ENST00000533523 PCDHAC2Q9Y5I4 1007 aa19.96■□□□□ 0.79
CHMP4A-207ENST00000533523 IRS2Q9Y4H2 1338 aa19.96■□□□□ 0.79
CHMP4A-207ENST00000533523 CLRN2A0PK11 232 aa19.95■□□□□ 0.78
CHMP4A-207ENST00000533523 F6X3S4 739 aa19.95■□□□□ 0.78
CHMP4A-207ENST00000533523 FKTNO75072 461 aa19.95■□□□□ 0.78
CHMP4A-207ENST00000533523 VEZTQ9HBM0 779 aa19.95■□□□□ 0.78
CHMP4A-207ENST00000533523 MYO1BO43795 1136 aa19.94■□□□□ 0.78
CHMP4A-207ENST00000533523 FOXO4P98177 505 aa19.94■□□□□ 0.78
CHMP4A-207ENST00000533523 CFAP100Q494V2 611 aa19.94■□□□□ 0.78
CHMP4A-207ENST00000533523 TAF7LQ5H9L4 462 aa19.94■□□□□ 0.78
CHMP4A-207ENST00000533523 LDLRAD1Q5T700 205 aa19.94■□□□□ 0.78
CHMP4A-207ENST00000533523 PPP2R3BQ9Y5P8 575 aa19.94■□□□□ 0.78
CHMP4A-207ENST00000533523 PLIN1O60240 522 aa19.93■□□□□ 0.78
CHMP4A-207ENST00000533523 EXOSC9Q06265 439 aaKnown RBP19.93■□□□□ 0.78
CHMP4A-207ENST00000533523 C15orf52Q6ZUT6 534 aaKnown RBP19.93■□□□□ 0.78
CHMP4A-207ENST00000533523 MTMR14Q8NCE2 650 aa19.93■□□□□ 0.78
CHMP4A-207ENST00000533523 SLC10A4Q96EP9 437 aa19.93■□□□□ 0.78
CHMP4A-207ENST00000533523 CLMNQ96JQ2 1002 aa19.93■□□□□ 0.78
CHMP4A-207ENST00000533523 SPDYE2BA6NHP3 402 aa19.92■□□□□ 0.78
CHMP4A-207ENST00000533523 MANSC4A6NHS7 340 aaPredicted RBP19.92■□□□□ 0.78
CHMP4A-207ENST00000533523 IGF2BP3O00425 579 aaKnown RBP eCLIP19.92■□□□□ 0.78
CHMP4A-207ENST00000533523 PPP1R12BO60237 982 aaPredicted RBP19.92■□□□□ 0.78
CHMP4A-207ENST00000533523 VAMP4O75379 141 aa19.92■□□□□ 0.78
CHMP4A-207ENST00000533523 ALDH1A1P00352 501 aa19.92■□□□□ 0.78
CHMP4A-207ENST00000533523 SPDYE6P0CI01 402 aa19.92■□□□□ 0.78
CHMP4A-207ENST00000533523 IL1R1P14778 569 aa19.92■□□□□ 0.78
CHMP4A-207ENST00000533523 RBM5P52756 815 aaKnown RBP eCLIP19.92■□□□□ 0.78
CHMP4A-207ENST00000533523 LMBR1LQ6UX01 489 aa19.92■□□□□ 0.78
CHMP4A-207ENST00000533523 OTOP1Q7RTM1 612 aa19.92■□□□□ 0.78
CHMP4A-207ENST00000533523 WNK4Q96J92 1243 aa19.92■□□□□ 0.78
CHMP4A-207ENST00000533523 ZNF594Q96JF6 807 aaPredicted RBP19.92■□□□□ 0.78
CHMP4A-207ENST00000533523 CCDC57Q2TAC2 916 aa19.91■□□□□ 0.78
CHMP4A-207ENST00000533523 BEND3Q5T5X7 828 aa19.91■□□□□ 0.78
CHMP4A-207ENST00000533523 YTHDC1Q96MU7 727 aaKnown RBP19.91■□□□□ 0.78
CHMP4A-207ENST00000533523 CNNM1Q9NRU3 951 aa19.91■□□□□ 0.78
CHMP4A-207ENST00000533523 MYH13Q9UKX3 1938 aa19.91■□□□□ 0.78
CHMP4A-207ENST00000533523 AOX1Q06278 1338 aa19.91■□□□□ 0.78
CHMP4A-207ENST00000533523 ZBTB48P10074 688 aaPredicted RBP19.9■□□□□ 0.78
CHMP4A-207ENST00000533523 EN2P19622 333 aaPredicted RBP19.9■□□□□ 0.78
CHMP4A-207ENST00000533523 MAP3K11Q16584 847 aa19.9■□□□□ 0.78
CHMP4A-207ENST00000533523 EPHA10Q5JZY3 1008 aa19.9■□□□□ 0.78
CHMP4A-207ENST00000533523 LDHAL6AQ6ZMR3 332 aa19.9■□□□□ 0.78
CHMP4A-207ENST00000533523 IFNL1Q8IU54 200 aa19.9■□□□□ 0.78
CHMP4A-207ENST00000533523 GCC1Q96CN9 775 aa19.9■□□□□ 0.78
CHMP4A-207ENST00000533523 GRM8O00222 908 aa19.89■□□□□ 0.77
CHMP4A-207ENST00000533523 IREB2P48200 963 aaKnown RBP19.89■□□□□ 0.77
CHMP4A-207ENST00000533523 FKBP1AP62942 108 aaKnown RBP19.89■□□□□ 0.77
CHMP4A-207ENST00000533523 SUPT20HL1Q3ZLR7 823 aa19.89■□□□□ 0.77
CHMP4A-207ENST00000533523 GJA5P36382 358 aa19.88■□□□□ 0.77
CHMP4A-207ENST00000533523 NBPF12Q5TAG4 269 aaPredicted RBP19.88■□□□□ 0.77
CHMP4A-207ENST00000533523 PRMT6Q96LA8 375 aaPredicted RBP19.88■□□□□ 0.77
CHMP4A-207ENST00000533523 C9orf78Q9NZ63 289 aaPredicted RBP19.88■□□□□ 0.77
CHMP4A-207ENST00000533523 TRIM17Q9Y577 477 aa19.88■□□□□ 0.77
CHMP4A-207ENST00000533523 INHBEP58166 350 aa19.86■□□□□ 0.77
CHMP4A-207ENST00000533523 RASA3Q14644 834 aa19.86■□□□□ 0.77
CHMP4A-207ENST00000533523 MFSD14BQ5SR56 506 aa19.86■□□□□ 0.77
CHMP4A-207ENST00000533523 SLC4A10Q6U841 1118 aa19.86■□□□□ 0.77
CHMP4A-207ENST00000533523 COLQQ9Y215 455 aaPredicted RBP19.86■□□□□ 0.77
CHMP4A-207ENST00000533523 CUL9Q8IWT3 2517 aa19.86■□□□□ 0.77
CHMP4A-207ENST00000533523 FAM205AQ6ZU69 1335 aa19.85■□□□□ 0.77
CHMP4A-207ENST00000533523 TNFAIP1Q13829 316 aa19.85■□□□□ 0.77
CHMP4A-207ENST00000533523 ARMC5Q96C12 935 aa19.85■□□□□ 0.77
CHMP4A-207ENST00000533523 TTF2Q9UNY4 1162 aaKnown RBP19.85■□□□□ 0.77
CHMP4A-207ENST00000533523 UNC80Q8N2C7 3258 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms