RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 A0A087WWV3 80 aa19.37■□□□□ 0.69
CTSB-228ENST00000533455 ZNF397Q8NF99 534 aaPredicted RBP19.37■□□□□ 0.69
CTSB-228ENST00000533455 KCNG4Q8TDN1 519 aa19.37■□□□□ 0.69
CTSB-228ENST00000533455 ERO1AQ96HE7 468 aa19.37■□□□□ 0.69
CTSB-228ENST00000533455 POLR3EQ9NVU0 708 aa19.37■□□□□ 0.69
CTSB-228ENST00000533455 MORC2Q9Y6X9 1032 aaPredicted RBP19.37■□□□□ 0.69
CTSB-228ENST00000533455 C4AP0C0L4 1744 aa19.36■□□□□ 0.69
CTSB-228ENST00000533455 C4BP0C0L5 1744 aa19.36■□□□□ 0.69
CTSB-228ENST00000533455 UBR2Q8IWV8 1755 aa19.36■□□□□ 0.69
CTSB-228ENST00000533455 IFIT1P09914 478 aaKnown RBP19.36■□□□□ 0.69
CTSB-228ENST00000533455 KCNJ6P48051 423 aa19.36■□□□□ 0.69
CTSB-228ENST00000533455 DHX8Q14562 1220 aaKnown RBP19.36■□□□□ 0.69
CTSB-228ENST00000533455 KIAA1468Q9P260 1216 aa19.36■□□□□ 0.69
CTSB-228ENST00000533455 C1orf167Q5SNV9 1468 aa19.36■□□□□ 0.69
CTSB-228ENST00000533455 M0R2C6 588 aa19.35■□□□□ 0.69
CTSB-228ENST00000533455 EYA2O00167 538 aa19.35■□□□□ 0.69
CTSB-228ENST00000533455 CIAO1O76071 339 aa19.35■□□□□ 0.69
CTSB-228ENST00000533455 ZC3H6P61129 1189 aaKnown RBP19.35■□□□□ 0.69
CTSB-228ENST00000533455 GABPB1Q06547 395 aaPredicted RBP19.35■□□□□ 0.69
CTSB-228ENST00000533455 CCDC150Q8NCX0 1101 aa19.35■□□□□ 0.69
CTSB-228ENST00000533455 RGS22Q8NE09 1264 aa19.35■□□□□ 0.69
CTSB-228ENST00000533455 KIF18AQ8NI77 898 aa19.35■□□□□ 0.69
CTSB-228ENST00000533455 ZNF215Q9UL58 517 aaPredicted RBP19.35■□□□□ 0.69
CTSB-228ENST00000533455 CCDC9Q9Y3X0 531 aaKnown RBP19.35■□□□□ 0.69
CTSB-228ENST00000533455 MYH7P12883 1935 aa19.35■□□□□ 0.69
CTSB-228ENST00000533455 CYP27B1O15528 508 aa19.35■□□□□ 0.69
CTSB-228ENST00000533455 NDUFA8P51970 172 aa19.35■□□□□ 0.69
CTSB-228ENST00000533455 TIMM10P62072 90 aa19.35■□□□□ 0.69
CTSB-228ENST00000533455 BRAPQ7Z569 592 aa19.35■□□□□ 0.69
CTSB-228ENST00000533455 SDF4Q9BRK5 362 aa19.35■□□□□ 0.69
CTSB-228ENST00000533455 CWC25Q9NXE8 425 aaPredicted RBP19.35■□□□□ 0.69
CTSB-228ENST00000533455 NAP1L2Q9ULW6 460 aaPredicted RBP19.35■□□□□ 0.69
CTSB-228ENST00000533455 A0A1B0GVL5 298 aa19.34■□□□□ 0.69
CTSB-228ENST00000533455 STK38Q15208 465 aa19.34■□□□□ 0.69
CTSB-228ENST00000533455 ATG3Q9NT62 314 aa19.34■□□□□ 0.69
CTSB-228ENST00000533455 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.34■□□□□ 0.69
CTSB-228ENST00000533455 CHST3Q7LGC8 479 aa19.34■□□□□ 0.69
CTSB-228ENST00000533455 CLIC4Q9Y696 253 aa19.34■□□□□ 0.69
CTSB-228ENST00000533455 LRRFIP1Q32MZ4 808 aaKnown RBP19.33■□□□□ 0.68
CTSB-228ENST00000533455 DPCR1Q3MIW9 517 aa19.33■□□□□ 0.68
CTSB-228ENST00000533455 TTLL5Q6EMB2 1281 aa19.33■□□□□ 0.68
CTSB-228ENST00000533455 FBXO18Q8NFZ0 1043 aa19.33■□□□□ 0.68
CTSB-228ENST00000533455 ERCC4Q92889 916 aaPredicted RBP19.33■□□□□ 0.68
CTSB-228ENST00000533455 C8orf76Q96K31 380 aa19.33■□□□□ 0.68
CTSB-228ENST00000533455 TRMT1Q9NXH9 659 aaKnown RBP19.33■□□□□ 0.68
CTSB-228ENST00000533455 A0A1B0GUL7 405 aa19.32■□□□□ 0.68
CTSB-228ENST00000533455 PSDA5PKW4 1024 aaPredicted RBP19.32■□□□□ 0.68
CTSB-228ENST00000533455 SPTLC2O15270 562 aa19.32■□□□□ 0.68
CTSB-228ENST00000533455 DHX16O60231 1041 aaKnown RBP19.32■□□□□ 0.68
CTSB-228ENST00000533455 SLU7O95391 586 aaKnown RBP19.32■□□□□ 0.68
CTSB-228ENST00000533455 NLRP12P59046 1061 aa19.32■□□□□ 0.68
CTSB-228ENST00000533455 SF3A1Q15459 793 aaKnown RBP19.32■□□□□ 0.68
CTSB-228ENST00000533455 MYSM1Q5VVJ2 828 aa19.32■□□□□ 0.68
CTSB-228ENST00000533455 MB21D2Q8IYB1 491 aaPredicted RBP19.32■□□□□ 0.68
CTSB-228ENST00000533455 OSBP2Q969R2 916 aa19.32■□□□□ 0.68
CTSB-228ENST00000533455 NBPF26B4DH59 902 aa19.32■□□□□ 0.68
CTSB-228ENST00000533455 LRRC24Q50LG9 513 aa19.32■□□□□ 0.68
CTSB-228ENST00000533455 NBPF14Q5TI25 921 aa19.32■□□□□ 0.68
CTSB-228ENST00000533455 NBPF10Q6P3W6 841 aaKnown RBP19.32■□□□□ 0.68
CTSB-228ENST00000533455 NBPF15Q8N660 670 aa19.32■□□□□ 0.68
CTSB-228ENST00000533455 FAM53CQ9NYF3 392 aa19.32■□□□□ 0.68
CTSB-228ENST00000533455 WDR19Q8NEZ3 1342 aa19.32■□□□□ 0.68
CTSB-228ENST00000533455 PAPPAQ13219 1627 aa19.31■□□□□ 0.68
CTSB-228ENST00000533455 FOXP2O15409 715 aa19.31■□□□□ 0.68
CTSB-228ENST00000533455 TUBB4AP04350 444 aa19.31■□□□□ 0.68
CTSB-228ENST00000533455 ZFYP08048 801 aaPredicted RBP19.31■□□□□ 0.68
CTSB-228ENST00000533455 CABP4P57796 275 aa19.31■□□□□ 0.68
CTSB-228ENST00000533455 TPM4P67936 248 aa19.31■□□□□ 0.68
CTSB-228ENST00000533455 ZRSR1Q15695 479 aaKnown RBP19.31■□□□□ 0.68
CTSB-228ENST00000533455 KMT5BQ4FZB7 885 aa19.31■□□□□ 0.68
CTSB-228ENST00000533455 E4F1Q66K89 784 aaPredicted RBP19.31■□□□□ 0.68
CTSB-228ENST00000533455 XPO4Q9C0E2 1151 aaKnown RBP19.31■□□□□ 0.68
CTSB-228ENST00000533455 L2HGDHQ9H9P8 463 aa19.31■□□□□ 0.68
CTSB-228ENST00000533455 HPS5Q9UPZ3 1129 aa19.31■□□□□ 0.68
CTSB-228ENST00000533455 PPFIA3O75145 1194 aa19.3■□□□□ 0.68
CTSB-228ENST00000533455 IMMTQ16891 758 aaKnown RBP19.3■□□□□ 0.68
CTSB-228ENST00000533455 ARMCX5Q6P1M9 558 aa19.3■□□□□ 0.68
CTSB-228ENST00000533455 GPHNQ9NQX3 736 aaPredicted RBP19.3■□□□□ 0.68
CTSB-228ENST00000533455 SLC3A2P08195 630 aaKnown RBP19.3■□□□□ 0.68
CTSB-228ENST00000533455 NCAPHQ15003 741 aa19.3■□□□□ 0.68
CTSB-228ENST00000533455 OTUD7BQ6GQQ9 843 aa19.3■□□□□ 0.68
CTSB-228ENST00000533455 CCDC191Q8NCU4 936 aa19.3■□□□□ 0.68
CTSB-228ENST00000533455 IFNKQ9P0W0 207 aa19.3■□□□□ 0.68
CTSB-228ENST00000533455 ORC3Q9UBD5 711 aaPredicted RBP19.3■□□□□ 0.68
CTSB-228ENST00000533455 ABCC12Q96J65 1359 aa19.3■□□□□ 0.68
CTSB-228ENST00000533455 KLF18A0A0U1RQI7 1052 aa19.29■□□□□ 0.68
CTSB-228ENST00000533455 PRC1O43663 620 aa19.29■□□□□ 0.68
CTSB-228ENST00000533455 CMA1P23946 247 aa19.29■□□□□ 0.68
CTSB-228ENST00000533455 AXDND1Q5T1B0 1012 aaPredicted RBP19.29■□□□□ 0.68
CTSB-228ENST00000533455 TMC6Q7Z403 805 aa19.29■□□□□ 0.68
CTSB-228ENST00000533455 FBXW7Q969H0 707 aa19.29■□□□□ 0.68
CTSB-228ENST00000533455 PPP1R13BQ96KQ4 1090 aa19.29■□□□□ 0.68
CTSB-228ENST00000533455 TIGD1Q96MW7 591 aa19.29■□□□□ 0.68
CTSB-228ENST00000533455 ECM29Q5VYK3 1845 aa19.29■□□□□ 0.68
CTSB-228ENST00000533455 GOLGA8BA8MQT2 603 aa19.29■□□□□ 0.68
CTSB-228ENST00000533455 IKBKBO14920 756 aa19.29■□□□□ 0.68
CTSB-228ENST00000533455 ZNF202O95125 648 aa19.29■□□□□ 0.68
CTSB-228ENST00000533455 SMC2O95347 1197 aa19.29■□□□□ 0.68
CTSB-228ENST00000533455 KIF23Q02241 960 aaPredicted RBP19.29■□□□□ 0.68
CTSB-228ENST00000533455 ANO1Q5XXA6 986 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms