RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 WNT10BO00744 389 aa37.82■■■■□ 3.64
SSSCA1-207ENST00000533115 CLUAP1Q96AJ1 413 aa37.82■■■■□ 3.64
SSSCA1-207ENST00000533115 JAG2Q9Y219 1238 aa37.82■■■■□ 3.64
SSSCA1-207ENST00000533115 ECE1P42892 770 aa37.81■■■■□ 3.64
SSSCA1-207ENST00000533115 CYP4F22Q6NT55 531 aa37.81■■■■□ 3.64
SSSCA1-207ENST00000533115 FBXO33Q7Z6M2 555 aa37.81■■■■□ 3.64
SSSCA1-207ENST00000533115 CAPNS2Q96L46 248 aa37.81■■■■□ 3.64
SSSCA1-207ENST00000533115 FBXO3Q9UK99 471 aa37.81■■■■□ 3.64
SSSCA1-207ENST00000533115 FAM205AQ6ZU69 1335 aa37.81■■■■□ 3.64
SSSCA1-207ENST00000533115 HHIPL1Q96JK4 782 aa37.8■■■■□ 3.64
SSSCA1-207ENST00000533115 PUM3Q15397 648 aaKnown RBP37.79■■■■□ 3.64
SSSCA1-207ENST00000533115 CAVIN4Q5BKX8 364 aa37.79■■■■□ 3.64
SSSCA1-207ENST00000533115 ATG9AQ7Z3C6 839 aa37.79■■■■□ 3.64
SSSCA1-207ENST00000533115 VPS37DQ86XT2 251 aa37.79■■■■□ 3.64
SSSCA1-207ENST00000533115 CDCA5Q96FF9 252 aa37.79■■■■□ 3.64
SSSCA1-207ENST00000533115 FGFR2P21802 821 aa37.78■■■■□ 3.64
SSSCA1-207ENST00000533115 ZBED3Q96IU2 234 aaPredicted RBP37.78■■■■□ 3.64
SSSCA1-207ENST00000533115 SIL1Q9H173 461 aa37.78■■■■□ 3.64
SSSCA1-207ENST00000533115 GBA2Q9HCG7 927 aaPredicted RBP37.78■■■■□ 3.64
SSSCA1-207ENST00000533115 CIAO1O76071 339 aa37.77■■■■□ 3.64
SSSCA1-207ENST00000533115 F8W031 263 aaPredicted RBP37.76■■■■□ 3.64
SSSCA1-207ENST00000533115 IFIT1P09914 478 aaKnown RBP37.76■■■■□ 3.64
SSSCA1-207ENST00000533115 GRM1Q13255 1194 aa37.76■■■■□ 3.64
SSSCA1-207ENST00000533115 C2orf69Q8N8R5 385 aa37.76■■■■□ 3.64
SSSCA1-207ENST00000533115 TMEM57Q8N5G2 664 aa37.75■■■■□ 3.63
SSSCA1-207ENST00000533115 SCAF8Q9UPN6 1271 aaKnown RBP37.75■■■■□ 3.63
SSSCA1-207ENST00000533115 HUNKP57058 714 aa37.74■■■■□ 3.63
SSSCA1-207ENST00000533115 DLGAP5Q15398 846 aa37.74■■■■□ 3.63
SSSCA1-207ENST00000533115 MFSD14BQ5SR56 506 aa37.74■■■■□ 3.63
SSSCA1-207ENST00000533115 MTMR14Q8NCE2 650 aa37.74■■■■□ 3.63
SSSCA1-207ENST00000533115 COPRSQ9NQ92 184 aa37.74■■■■□ 3.63
SSSCA1-207ENST00000533115 PA2G4Q9UQ80 394 aaKnown RBP37.74■■■■□ 3.63
SSSCA1-207ENST00000533115 BCAMP50895 628 aa37.73■■■■□ 3.63
SSSCA1-207ENST00000533115 LPIN2Q92539 896 aa37.73■■■■□ 3.63
SSSCA1-207ENST00000533115 IQSEC3Q9UPP2 1182 aaPredicted RBP37.73■■■■□ 3.63
SSSCA1-207ENST00000533115 SLC5A1P13866 664 aa37.72■■■■□ 3.63
SSSCA1-207ENST00000533115 MTX1Q13505 466 aa37.72■■■■□ 3.63
SSSCA1-207ENST00000533115 CEP126Q9P2H0 1117 aa37.72■■■■□ 3.63
SSSCA1-207ENST00000533115 GNAI2P04899 355 aa37.71■■■■□ 3.63
SSSCA1-207ENST00000533115 IL15P40933 162 aaPredicted RBP37.71■■■■□ 3.63
SSSCA1-207ENST00000533115 WBP1LQ9NX94 342 aa37.71■■■■□ 3.63
SSSCA1-207ENST00000533115 THSD7BQ9C0I4 1608 aa37.71■■■■□ 3.63
SSSCA1-207ENST00000533115 SRGAP3O43295 1099 aa37.7■■■■□ 3.63
SSSCA1-207ENST00000533115 FRAT2O75474 233 aaPredicted RBP37.7■■■■□ 3.63
SSSCA1-207ENST00000533115 CFAP100Q494V2 611 aa37.7■■■■□ 3.63
SSSCA1-207ENST00000533115 MAP2K1Q02750 393 aaPredicted RBP37.69■■■■□ 3.62
SSSCA1-207ENST00000533115 APOBEC3FQ8IUX4 373 aaKnown RBP37.69■■■■□ 3.62
SSSCA1-207ENST00000533115 AIDAQ96BJ3 306 aa37.69■■■■□ 3.62
SSSCA1-207ENST00000533115 FTSJ3Q8IY81 847 aaKnown RBP37.68■■■■□ 3.62
SSSCA1-207ENST00000533115 PCDHAC2Q9Y5I4 1007 aa37.68■■■■□ 3.62
SSSCA1-207ENST00000533115 AOC2O75106 756 aa37.67■■■■□ 3.62
SSSCA1-207ENST00000533115 MAP2K2P36507 400 aa37.67■■■■□ 3.62
SSSCA1-207ENST00000533115 CHAF1AQ13111 956 aaPredicted RBP37.67■■■■□ 3.62
SSSCA1-207ENST00000533115 DZIP1LQ8IYY4 767 aaKnown RBP37.67■■■■□ 3.62
SSSCA1-207ENST00000533115 ARAP2Q8WZ64 1704 aa37.67■■■■□ 3.62
SSSCA1-207ENST00000533115 SPDYE2BA6NHP3 402 aa37.66■■■■□ 3.62
SSSCA1-207ENST00000533115 FOXN1O15353 648 aa37.66■■■■□ 3.62
SSSCA1-207ENST00000533115 SPDYE6P0CI01 402 aa37.66■■■■□ 3.62
SSSCA1-207ENST00000533115 ATP2B3Q16720 1220 aa37.66■■■■□ 3.62
SSSCA1-207ENST00000533115 PRAMEF18Q5VWM3 479 aa37.66■■■■□ 3.62
SSSCA1-207ENST00000533115 TBC1D22AQ8WUA7 517 aa37.66■■■■□ 3.62
SSSCA1-207ENST00000533115 TTF2Q9UNY4 1162 aaKnown RBP37.66■■■■□ 3.62
SSSCA1-207ENST00000533115 RGMBQ6NW40 437 aa37.65■■■■□ 3.62
SSSCA1-207ENST00000533115 RBM5P52756 815 aaKnown RBP eCLIP37.64■■■■□ 3.62
SSSCA1-207ENST00000533115 FKBP1BP68106 108 aa37.64■■■■□ 3.62
SSSCA1-207ENST00000533115 PRMT6Q96LA8 375 aaPredicted RBP37.64■■■■□ 3.62
SSSCA1-207ENST00000533115 MYO1BO43795 1136 aa37.63■■■■□ 3.61
SSSCA1-207ENST00000533115 SERPINA10Q9UK55 444 aa37.63■■■■□ 3.61
SSSCA1-207ENST00000533115 ECM29Q5VYK3 1845 aa37.62■■■■□ 3.61
SSSCA1-207ENST00000533115 COL13A1Q5TAT6 717 aaPredicted RBP37.62■■■■□ 3.61
SSSCA1-207ENST00000533115 PAPPA2Q9BXP8 1791 aa37.61■■■■□ 3.61
SSSCA1-207ENST00000533115 RLBP1P12271 317 aa37.61■■■■□ 3.61
SSSCA1-207ENST00000533115 GRIK5Q16478 980 aa37.6■■■■□ 3.61
SSSCA1-207ENST00000533115 ITPRIPQ8IWB1 547 aa37.6■■■■□ 3.61
SSSCA1-207ENST00000533115 COL1A1P02452 1464 aaPredicted RBP37.59■■■■□ 3.61
SSSCA1-207ENST00000533115 CLRN2A0PK11 232 aa37.59■■■■□ 3.61
SSSCA1-207ENST00000533115 NF2P35240 595 aa37.59■■■■□ 3.61
SSSCA1-207ENST00000533115 CTCFP49711 727 aaPredicted RBP37.59■■■■□ 3.61
SSSCA1-207ENST00000533115 ZNF157P51786 506 aaPredicted RBP37.59■■■■□ 3.61
SSSCA1-207ENST00000533115 NOGQ13253 232 aa37.59■■■■□ 3.61
SSSCA1-207ENST00000533115 CCDC102AQ96A19 550 aa37.59■■■■□ 3.61
SSSCA1-207ENST00000533115 PNMA6EA0A0J9YXQ4 647 aa37.58■■■■□ 3.61
SSSCA1-207ENST00000533115 DEFB129Q9H1M3 183 aa37.58■■■■□ 3.61
SSSCA1-207ENST00000533115 AOX1Q06278 1338 aa37.58■■■■□ 3.61
SSSCA1-207ENST00000533115 FAM155AB1AL88 458 aaPredicted RBP37.57■■■■□ 3.6
SSSCA1-207ENST00000533115 CRKP46108 304 aa37.57■■■■□ 3.6
SSSCA1-207ENST00000533115 MOB2Q70IA6 237 aa37.56■■■■□ 3.6
SSSCA1-207ENST00000533115 BEGAINQ9BUH8 593 aa37.56■■■■□ 3.6
SSSCA1-207ENST00000533115 VEZTQ9HBM0 779 aa37.56■■■■□ 3.6
SSSCA1-207ENST00000533115 GNL3LQ9NVN8 582 aaKnown RBP37.56■■■■□ 3.6
SSSCA1-207ENST00000533115 HDLBPQ00341 1268 aaKnown RBP37.55■■■■□ 3.6
SSSCA1-207ENST00000533115 TFCP2Q12800 502 aa37.55■■■■□ 3.6
SSSCA1-207ENST00000533115 WDR66Q8TBY9 1149 aa37.55■■■■□ 3.6
SSSCA1-207ENST00000533115 SUGT1Q9Y2Z0 365 aa37.55■■■■□ 3.6
SSSCA1-207ENST00000533115 PPP2R3BQ9Y5P8 575 aa37.55■■■■□ 3.6
SSSCA1-207ENST00000533115 MYH13Q9UKX3 1938 aa37.54■■■■□ 3.6
SSSCA1-207ENST00000533115 ZBTB7BO15156 539 aaPredicted RBP37.54■■■■□ 3.6
SSSCA1-207ENST00000533115 TTLL12Q14166 644 aaPredicted RBP37.54■■■■□ 3.6
SSSCA1-207ENST00000533115 AKAP2Q9Y2D5 859 aa37.54■■■■□ 3.6
SSSCA1-207ENST00000533115 ZIC5Q96T25 663 aa37.53■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms