RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 GMLQ99445 158 aa30.59■■■□□ 2.49
USP48-214ENST00000532737 TAF1DQ9H5J8 278 aaPredicted RBP30.59■■■□□ 2.49
USP48-214ENST00000532737 DCTPP1Q9H773 170 aa30.59■■■□□ 2.49
USP48-214ENST00000532737 FAM205AQ6ZU69 1335 aa30.58■■■□□ 2.49
USP48-214ENST00000532737 SHTN1A0MZ66 631 aa30.58■■■□□ 2.49
USP48-214ENST00000532737 RAB11FIP3O75154 756 aa30.58■■■□□ 2.49
USP48-214ENST00000532737 LMOD1P29536 600 aaPredicted RBP30.58■■■□□ 2.49
USP48-214ENST00000532737 EPHX2P34913 555 aa30.57■■■□□ 2.48
USP48-214ENST00000532737 CCDC102BQ68D86 513 aa30.57■■■□□ 2.48
USP48-214ENST00000532737 AGBL3Q8NEM8 1001 aa30.57■■■□□ 2.48
USP48-214ENST00000532737 EAF2Q96CJ1 260 aaPredicted RBP30.57■■■□□ 2.48
USP48-214ENST00000532737 KIF1BPQ96EK5 621 aa30.57■■■□□ 2.48
USP48-214ENST00000532737 IL1RAPL2Q9NP60 686 aa30.57■■■□□ 2.48
USP48-214ENST00000532737 CNOT7Q9UIV1 285 aaKnown RBP30.57■■■□□ 2.48
USP48-214ENST00000532737 SCN4AP35499 1836 aa30.57■■■□□ 2.48
USP48-214ENST00000532737 CERS5Q8N5B7 392 aa30.56■■■□□ 2.48
USP48-214ENST00000532737 PSME4Q14997 1843 aa30.55■■■□□ 2.48
USP48-214ENST00000532737 FRAT2O75474 233 aaPredicted RBP30.55■■■□□ 2.48
USP48-214ENST00000532737 MICALL2Q8IY33 904 aa30.55■■■□□ 2.48
USP48-214ENST00000532737 DBNDD2Q9BQY9 259 aa30.55■■■□□ 2.48
USP48-214ENST00000532737 CHAF1AQ13111 956 aaPredicted RBP30.54■■■□□ 2.48
USP48-214ENST00000532737 CCDC8Q9H0W5 538 aaPredicted RBP30.54■■■□□ 2.48
USP48-214ENST00000532737 GNL3LQ9NVN8 582 aaKnown RBP30.54■■■□□ 2.48
USP48-214ENST00000532737 GORABQ5T7V8 394 aa30.53■■■□□ 2.48
USP48-214ENST00000532737 TLR7Q9NYK1 1049 aaKnown RBP30.53■■■□□ 2.48
USP48-214ENST00000532737 ARAP2Q8WZ64 1704 aa30.53■■■□□ 2.48
USP48-214ENST00000532737 ZNF646O15015 1829 aaPredicted RBP30.52■■■□□ 2.48
USP48-214ENST00000532737 MYO3BQ8WXR4 1341 aa30.52■■■□□ 2.48
USP48-214ENST00000532737 H7C1D1 291 aa30.52■■■□□ 2.48
USP48-214ENST00000532737 CENPBP07199 599 aaPredicted RBP30.52■■■□□ 2.48
USP48-214ENST00000532737 FKBP1AP62942 108 aaKnown RBP30.52■■■□□ 2.48
USP48-214ENST00000532737 HDAC1Q13547 482 aaPredicted RBP30.52■■■□□ 2.48
USP48-214ENST00000532737 AACSQ86V21 672 aa30.52■■■□□ 2.48
USP48-214ENST00000532737 ADARB2Q9NS39 739 aaKnown RBP30.52■■■□□ 2.48
USP48-214ENST00000532737 DBNLQ9UJU6 430 aaKnown RBP30.52■■■□□ 2.48
USP48-214ENST00000532737 USP17L8P0C7I0 530 aa30.5■■■□□ 2.47
USP48-214ENST00000532737 POTEIP0CG38 1075 aa30.5■■■□□ 2.47
USP48-214ENST00000532737 POTEJP0CG39 1038 aa30.5■■■□□ 2.47
USP48-214ENST00000532737 CLASRPQ8N2M8 674 aaKnown RBP30.5■■■□□ 2.47
USP48-214ENST00000532737 COL1A1P02452 1464 aaPredicted RBP30.5■■■□□ 2.47
USP48-214ENST00000532737 SEMA3EO15041 775 aa30.49■■■□□ 2.47
USP48-214ENST00000532737 ZBTB22O15209 634 aa30.49■■■□□ 2.47
USP48-214ENST00000532737 ZNF280AP59817 542 aaPredicted RBP30.49■■■□□ 2.47
USP48-214ENST00000532737 EAPPQ56P03 285 aaPredicted RBP30.49■■■□□ 2.47
USP48-214ENST00000532737 MFSD14BQ5SR56 506 aa30.49■■■□□ 2.47
USP48-214ENST00000532737 SAMD7Q7Z3H4 446 aa30.49■■■□□ 2.47
USP48-214ENST00000532737 KIAA0825Q8IV33 1275 aa30.49■■■□□ 2.47
USP48-214ENST00000532737 TRPM4Q8TD43 1214 aa30.49■■■□□ 2.47
USP48-214ENST00000532737 LRRCC1Q9C099 1032 aa30.49■■■□□ 2.47
USP48-214ENST00000532737 BCL11AQ9H165 835 aa30.49■■■□□ 2.47
USP48-214ENST00000532737 SMARCA5O60264 1052 aaPredicted RBP30.48■■■□□ 2.47
USP48-214ENST00000532737 RASGRF1Q13972 1273 aa30.48■■■□□ 2.47
USP48-214ENST00000532737 PNMA8AQ86V59 439 aaPredicted RBP30.48■■■□□ 2.47
USP48-214ENST00000532737 DENND2AQ9ULE3 1009 aa30.48■■■□□ 2.47
USP48-214ENST00000532737 EGFRP00533 1210 aa30.47■■■□□ 2.47
USP48-214ENST00000532737 HIRAP54198 1017 aaPredicted RBP30.47■■■□□ 2.47
USP48-214ENST00000532737 GRIK5Q16478 980 aa30.47■■■□□ 2.47
USP48-214ENST00000532737 TBC1D10BQ4KMP7 808 aaPredicted RBP30.47■■■□□ 2.47
USP48-214ENST00000532737 RBM26Q5T8P6 1007 aaKnown RBP30.47■■■□□ 2.47
USP48-214ENST00000532737 USP50Q70EL3 339 aaPredicted RBP30.47■■■□□ 2.47
USP48-214ENST00000532737 ARID4AP29374 1257 aaPredicted RBP30.46■■■□□ 2.47
USP48-214ENST00000532737 TBC1D22AQ8WUA7 517 aa30.46■■■□□ 2.47
USP48-214ENST00000532737 F8W031 263 aaPredicted RBP30.45■■■□□ 2.47
USP48-214ENST00000532737 UQCRFS1P1P0C7P4 283 aa30.45■■■□□ 2.47
USP48-214ENST00000532737 SCARF1Q14162 830 aa30.45■■■□□ 2.47
USP48-214ENST00000532737 CCDC158Q5M9N0 1113 aa30.45■■■□□ 2.47
USP48-214ENST00000532737 CHADLQ6NUI6 762 aa30.45■■■□□ 2.47
USP48-214ENST00000532737 WDR66Q8TBY9 1149 aa30.45■■■□□ 2.47
USP48-214ENST00000532737 IGHDP01880 384 aa30.44■■■□□ 2.46
USP48-214ENST00000532737 TTC39AQ5SRH9 613 aa30.44■■■□□ 2.46
USP48-214ENST00000532737 OGFOD1Q8N543 542 aa30.44■■■□□ 2.46
USP48-214ENST00000532737 RWDD1Q9H446 243 aaPredicted RBP30.44■■■□□ 2.46
USP48-214ENST00000532737 HMG20BQ9P0W2 317 aa30.44■■■□□ 2.46
USP48-214ENST00000532737 ADAMTSL1Q8N6G6 1762 aa30.43■■■□□ 2.46
USP48-214ENST00000532737 LDHDQ86WU2 507 aa30.43■■■□□ 2.46
USP48-214ENST00000532737 MYOZ2Q9NPC6 264 aa30.43■■■□□ 2.46
USP48-214ENST00000532737 CLEC11AQ9Y240 323 aa30.43■■■□□ 2.46
USP48-214ENST00000532737 IFIT2P09913 472 aaKnown RBP30.42■■■□□ 2.46
USP48-214ENST00000532737 MCAMP43121 646 aa30.42■■■□□ 2.46
USP48-214ENST00000532737 KIF4BQ2VIQ3 1234 aa30.42■■■□□ 2.46
USP48-214ENST00000532737 COL13A1Q5TAT6 717 aaPredicted RBP30.42■■■□□ 2.46
USP48-214ENST00000532737 PI16Q6UXB8 463 aa30.42■■■□□ 2.46
USP48-214ENST00000532737 ZNF512BQ96KM6 892 aaPredicted RBP30.42■■■□□ 2.46
USP48-214ENST00000532737 PDS5AQ29RF7 1337 aaKnown RBP30.42■■■□□ 2.46
USP48-214ENST00000532737 SPATA5Q8NB90 893 aa30.41■■■□□ 2.46
USP48-214ENST00000532737 HDAC9Q9UKV0 1011 aa30.41■■■□□ 2.46
USP48-214ENST00000532737 TTF2Q9UNY4 1162 aaKnown RBP30.41■■■□□ 2.46
USP48-214ENST00000532737 MMP14P50281 582 aa30.4■■■□□ 2.46
USP48-214ENST00000532737 GCC1Q96CN9 775 aa30.4■■■□□ 2.46
USP48-214ENST00000532737 SNRKQ9NRH2 765 aa30.4■■■□□ 2.46
USP48-214ENST00000532737 SALL1Q9NSC2 1324 aa30.4■■■□□ 2.46
USP48-214ENST00000532737 SUGT1Q9Y2Z0 365 aa30.38■■■□□ 2.45
USP48-214ENST00000532737 PRDX5P30044 214 aa30.37■■■□□ 2.45
USP48-214ENST00000532737 ANKRD45Q5TZF3 282 aa30.37■■■□□ 2.45
USP48-214ENST00000532737 SMC5Q8IY18 1101 aa30.37■■■□□ 2.45
USP48-214ENST00000532737 CREBZFQ9NS37 354 aa30.37■■■□□ 2.45
USP48-214ENST00000532737 PGAP2Q9UHJ9 254 aa30.37■■■□□ 2.45
USP48-214ENST00000532737 PCDHAC2Q9Y5I4 1007 aa30.37■■■□□ 2.45
USP48-214ENST00000532737 ASTN2O75129 1339 aaPredicted RBP30.37■■■□□ 2.45
USP48-214ENST00000532737 MAP1SQ66K74 1059 aaPredicted RBP30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms