RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 CERS5Q8N5B7 392 aa17.96■□□□□ 0.47
FOXR1-202ENST00000531539 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.96■□□□□ 0.47
FOXR1-202ENST00000531539 HDAC9Q9UKV0 1011 aa17.96■□□□□ 0.47
FOXR1-202ENST00000531539 TMEM88BA6NKF7 163 aa17.95■□□□□ 0.46
FOXR1-202ENST00000531539 TFCP2Q12800 502 aa17.95■□□□□ 0.46
FOXR1-202ENST00000531539 CHAF1AQ13111 956 aaPredicted RBP17.95■□□□□ 0.46
FOXR1-202ENST00000531539 CREBZFQ9NS37 354 aa17.95■□□□□ 0.46
FOXR1-202ENST00000531539 ASTN2O75129 1339 aaPredicted RBP17.95■□□□□ 0.46
FOXR1-202ENST00000531539 TIMM10P62072 90 aa17.94■□□□□ 0.46
FOXR1-202ENST00000531539 MVPQ14764 893 aaKnown RBP17.94■□□□□ 0.46
FOXR1-202ENST00000531539 DLK2Q6UY11 383 aa17.94■□□□□ 0.46
FOXR1-202ENST00000531539 FAM205AQ6ZU69 1335 aa17.94■□□□□ 0.46
FOXR1-202ENST00000531539 ADAMTSL1Q8N6G6 1762 aa17.94■□□□□ 0.46
FOXR1-202ENST00000531539 MMP14P50281 582 aa17.93■□□□□ 0.46
FOXR1-202ENST00000531539 FKBP1AP62942 108 aaKnown RBP17.93■□□□□ 0.46
FOXR1-202ENST00000531539 POLA2Q14181 598 aa17.93■□□□□ 0.46
FOXR1-202ENST00000531539 NBPF9Q3BBW0 867 aa17.93■□□□□ 0.46
FOXR1-202ENST00000531539 C20orf194Q5TEA3 1177 aa17.93■□□□□ 0.46
FOXR1-202ENST00000531539 ANGEL2Q5VTE6 544 aaKnown RBP17.93■□□□□ 0.46
FOXR1-202ENST00000531539 KRT26Q7Z3Y9 468 aa17.93■□□□□ 0.46
FOXR1-202ENST00000531539 SURF6O75683 361 aaKnown RBP17.92■□□□□ 0.46
FOXR1-202ENST00000531539 OS9Q13438 667 aaPredicted RBP17.92■□□□□ 0.46
FOXR1-202ENST00000531539 MFSD14BQ5SR56 506 aa17.92■□□□□ 0.46
FOXR1-202ENST00000531539 CST9Q5W186 159 aa17.92■□□□□ 0.46
FOXR1-202ENST00000531539 SSH3Q8TE77 659 aa17.92■□□□□ 0.46
FOXR1-202ENST00000531539 NEUROD6Q96NK8 337 aa17.92■□□□□ 0.46
FOXR1-202ENST00000531539 ZNF408Q9H9D4 720 aa17.92■□□□□ 0.46
FOXR1-202ENST00000531539 GGA3Q9NZ52 723 aa17.92■□□□□ 0.46
FOXR1-202ENST00000531539 DDX19BQ9UMR2 479 aa17.92■□□□□ 0.46
FOXR1-202ENST00000531539 AKAP2Q9Y2D5 859 aa17.92■□□□□ 0.46
FOXR1-202ENST00000531539 ZNF609O15014 1411 aa17.91■□□□□ 0.46
FOXR1-202ENST00000531539 CELF2O95319 508 aaKnown RBP17.91■□□□□ 0.46
FOXR1-202ENST00000531539 RBM5P52756 815 aaKnown RBP eCLIP17.91■□□□□ 0.46
FOXR1-202ENST00000531539 PDE3AQ14432 1141 aa17.91■□□□□ 0.46
FOXR1-202ENST00000531539 DLGAP5Q15398 846 aa17.91■□□□□ 0.46
FOXR1-202ENST00000531539 SULF1Q8IWU6 871 aa17.91■□□□□ 0.46
FOXR1-202ENST00000531539 KLRG1Q96E93 195 aa17.91■□□□□ 0.46
FOXR1-202ENST00000531539 GNL3LQ9NVN8 582 aaKnown RBP17.91■□□□□ 0.46
FOXR1-202ENST00000531539 MKRN1Q9UHC7 482 aaKnown RBP17.91■□□□□ 0.46
FOXR1-202ENST00000531539 SCAF8Q9UPN6 1271 aaKnown RBP17.91■□□□□ 0.46
FOXR1-202ENST00000531539 A0A1B0GUL6 1792 aa17.91■□□□□ 0.46
FOXR1-202ENST00000531539 ADM5C9JUS6 153 aa17.9■□□□□ 0.46
FOXR1-202ENST00000531539 WNT10BO00744 389 aa17.9■□□□□ 0.46
FOXR1-202ENST00000531539 ADORA1P30542 326 aa17.9■□□□□ 0.46
FOXR1-202ENST00000531539 ABT1Q9ULW3 272 aaKnown RBP17.9■□□□□ 0.46
FOXR1-202ENST00000531539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.9■□□□□ 0.46
FOXR1-202ENST00000531539 CFAP100Q494V2 611 aa17.89■□□□□ 0.45
FOXR1-202ENST00000531539 CEP85Q6P2H3 762 aa17.89■□□□□ 0.45
FOXR1-202ENST00000531539 CHMP4BQ9H444 224 aaKnown RBP17.89■□□□□ 0.45
FOXR1-202ENST00000531539 TTF2Q9UNY4 1162 aaKnown RBP17.89■□□□□ 0.45
FOXR1-202ENST00000531539 PCDHAC2Q9Y5I4 1007 aa17.89■□□□□ 0.45
FOXR1-202ENST00000531539 PSME4Q14997 1843 aa17.88■□□□□ 0.45
FOXR1-202ENST00000531539 A0A1B0GUL7 405 aa17.88■□□□□ 0.45
FOXR1-202ENST00000531539 PHKA1P46020 1223 aa17.88■□□□□ 0.45
FOXR1-202ENST00000531539 DEFB115Q30KQ5 88 aa17.88■□□□□ 0.45
FOXR1-202ENST00000531539 GORABQ5T7V8 394 aa17.88■□□□□ 0.45
FOXR1-202ENST00000531539 TBC1D22AQ8WUA7 517 aa17.88■□□□□ 0.45
FOXR1-202ENST00000531539 XAGE2Q96GT9 111 aa17.88■□□□□ 0.45
FOXR1-202ENST00000531539 ZBTB40Q9NUA8 1239 aa17.88■□□□□ 0.45
FOXR1-202ENST00000531539 GRIK5Q16478 980 aa17.87■□□□□ 0.45
FOXR1-202ENST00000531539 CCDC102BQ68D86 513 aa17.87■□□□□ 0.45
FOXR1-202ENST00000531539 ZBED3Q96IU2 234 aaPredicted RBP17.87■□□□□ 0.45
FOXR1-202ENST00000531539 PRMT6Q96LA8 375 aaPredicted RBP17.87■□□□□ 0.45
FOXR1-202ENST00000531539 POLR2AP24928 1970 aaKnown RBP17.87■□□□□ 0.45
FOXR1-202ENST00000531539 PRAMEF18Q5VWM3 479 aa17.86■□□□□ 0.45
FOXR1-202ENST00000531539 RPAP2Q8IXW5 612 aaPredicted RBP17.86■□□□□ 0.45
FOXR1-202ENST00000531539 MTMR14Q8NCE2 650 aa17.86■□□□□ 0.45
FOXR1-202ENST00000531539 WDR66Q8TBY9 1149 aa17.86■□□□□ 0.45
FOXR1-202ENST00000531539 NOP58Q9Y2X3 529 aaKnown RBP17.86■□□□□ 0.45
FOXR1-202ENST00000531539 PAXIP1Q6ZW49 1069 aaPredicted RBP17.85■□□□□ 0.45
FOXR1-202ENST00000531539 CDCA5Q96FF9 252 aa17.85■□□□□ 0.45
FOXR1-202ENST00000531539 DENND2AQ9ULE3 1009 aa17.85■□□□□ 0.45
FOXR1-202ENST00000531539 PITPNM2Q9BZ72 1349 aa17.84■□□□□ 0.45
FOXR1-202ENST00000531539 SPDYE2BA6NHP3 402 aa17.84■□□□□ 0.45
FOXR1-202ENST00000531539 MYO1BO43795 1136 aa17.84■□□□□ 0.45
FOXR1-202ENST00000531539 SPDYE6P0CI01 402 aa17.84■□□□□ 0.45
FOXR1-202ENST00000531539 CRKP46108 304 aa17.84■□□□□ 0.45
FOXR1-202ENST00000531539 VEGFBP49765 207 aa17.84■□□□□ 0.45
FOXR1-202ENST00000531539 C2orf69Q8N8R5 385 aa17.84■□□□□ 0.45
FOXR1-202ENST00000531539 SERPINA10Q9UK55 444 aa17.84■□□□□ 0.45
FOXR1-202ENST00000531539 EXOC6BQ9Y2D4 811 aa17.84■□□□□ 0.45
FOXR1-202ENST00000531539 TLL2Q9Y6L7 1015 aa17.84■□□□□ 0.45
FOXR1-202ENST00000531539 CEP350Q5VT06 3117 aa17.83■□□□□ 0.45
FOXR1-202ENST00000531539 CLRN2A0PK11 232 aa17.83■□□□□ 0.44
FOXR1-202ENST00000531539 SEMA3EO15041 775 aa17.83■□□□□ 0.44
FOXR1-202ENST00000531539 GRM1Q13255 1194 aa17.83■□□□□ 0.44
FOXR1-202ENST00000531539 GBA2Q9HCG7 927 aaPredicted RBP17.83■□□□□ 0.44
FOXR1-202ENST00000531539 CNTNAP1P78357 1384 aa17.82■□□□□ 0.44
FOXR1-202ENST00000531539 RASSF10A6NK89 507 aa17.82■□□□□ 0.44
FOXR1-202ENST00000531539 HMMRO75330 724 aa17.82■□□□□ 0.44
FOXR1-202ENST00000531539 TNNI3KQ59H18 835 aa17.82■□□□□ 0.44
FOXR1-202ENST00000531539 SAPCD2Q86UD0 394 aa17.82■□□□□ 0.44
FOXR1-202ENST00000531539 SIRT2Q8IXJ6 389 aa17.82■□□□□ 0.44
FOXR1-202ENST00000531539 TDRD3Q9H7E2 651 aaKnown RBP17.82■□□□□ 0.44
FOXR1-202ENST00000531539 VEZTQ9HBM0 779 aa17.82■□□□□ 0.44
FOXR1-202ENST00000531539 GPR108Q9NPR9 543 aa17.82■□□□□ 0.44
FOXR1-202ENST00000531539 SUGT1Q9Y2Z0 365 aa17.82■□□□□ 0.44
FOXR1-202ENST00000531539 FPGT-TNNI3KV9GXZ4 949 aa17.82■□□□□ 0.44
FOXR1-202ENST00000531539 ZNF646O15015 1829 aaPredicted RBP17.82■□□□□ 0.44
FOXR1-202ENST00000531539 AOX1Q06278 1338 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms