RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 WBP1LQ9NX94 342 aa15.68■□□□□ 0.1
C11orf54-210ENST00000531516 EYA2O00167 538 aa15.67■□□□□ 0.1
C11orf54-210ENST00000531516 SLC5A1P13866 664 aa15.67■□□□□ 0.1
C11orf54-210ENST00000531516 TTLL12Q14166 644 aaPredicted RBP15.67■□□□□ 0.1
C11orf54-210ENST00000531516 NBPF9Q3BBW0 867 aa15.67■□□□□ 0.1
C11orf54-210ENST00000531516 RGMBQ6NW40 437 aa15.67■□□□□ 0.1
C11orf54-210ENST00000531516 TNS4Q8IZW8 715 aa15.67■□□□□ 0.1
C11orf54-210ENST00000531516 TBC1D22AQ8WUA7 517 aa15.67■□□□□ 0.1
C11orf54-210ENST00000531516 F8W031 263 aaPredicted RBP15.66■□□□□ 0.1
C11orf54-210ENST00000531516 GYG1P46976 350 aa15.66■□□□□ 0.1
C11orf54-210ENST00000531516 ZNF157P51786 506 aaPredicted RBP15.66■□□□□ 0.1
C11orf54-210ENST00000531516 LRRC24Q50LG9 513 aa15.66■□□□□ 0.1
C11orf54-210ENST00000531516 MFSD14BQ5SR56 506 aa15.66■□□□□ 0.1
C11orf54-210ENST00000531516 INTS3Q68E01 1043 aaKnown RBP15.66■□□□□ 0.1
C11orf54-210ENST00000531516 ATF7IPQ6VMQ6 1270 aa15.66■□□□□ 0.1
C11orf54-210ENST00000531516 TDRD7Q8NHU6 1098 aaKnown RBP15.66■□□□□ 0.1
C11orf54-210ENST00000531516 PRDM10Q9NQV6 1147 aa15.66■□□□□ 0.1
C11orf54-210ENST00000531516 GNL3LQ9NVN8 582 aaKnown RBP15.66■□□□□ 0.1
C11orf54-210ENST00000531516 CEP126Q9P2H0 1117 aa15.66■□□□□ 0.1
C11orf54-210ENST00000531516 FOXN1O15353 648 aa15.65■□□□□ 0.1
C11orf54-210ENST00000531516 ZKSCAN2Q63HK3 967 aa15.65■□□□□ 0.1
C11orf54-210ENST00000531516 FAM84BQ96KN1 310 aaPredicted RBP15.65■□□□□ 0.1
C11orf54-210ENST00000531516 LRRFIP2Q9Y608 721 aaKnown RBP15.65■□□□□ 0.1
C11orf54-210ENST00000531516 SPEF2Q9C093 1822 aa15.65■□□□□ 0.1
C11orf54-210ENST00000531516 ASTN2O75129 1339 aaPredicted RBP15.65■□□□□ 0.1
C11orf54-210ENST00000531516 FAM205AQ6ZU69 1335 aa15.65■□□□□ 0.1
C11orf54-210ENST00000531516 IRS2Q9Y4H2 1338 aa15.65■□□□□ 0.1
C11orf54-210ENST00000531516 CIAO1O76071 339 aa15.64■□□□□ 0.09
C11orf54-210ENST00000531516 TNFAIP1Q13829 316 aa15.64■□□□□ 0.09
C11orf54-210ENST00000531516 COL13A1Q5TAT6 717 aaPredicted RBP15.64■□□□□ 0.09
C11orf54-210ENST00000531516 ARMC9Q7Z3E5 817 aa15.64■□□□□ 0.09
C11orf54-210ENST00000531516 FTSJ3Q8IY81 847 aaKnown RBP15.64■□□□□ 0.09
C11orf54-210ENST00000531516 REM2Q8IYK8 340 aaPredicted RBP15.64■□□□□ 0.09
C11orf54-210ENST00000531516 MTMR14Q8NCE2 650 aa15.64■□□□□ 0.09
C11orf54-210ENST00000531516 LPIN2Q92539 896 aa15.64■□□□□ 0.09
C11orf54-210ENST00000531516 TTF2Q9UNY4 1162 aaKnown RBP15.64■□□□□ 0.09
C11orf54-210ENST00000531516 JAG2Q9Y219 1238 aa15.64■□□□□ 0.09
C11orf54-210ENST00000531516 PPP2R3BQ9Y5P8 575 aa15.64■□□□□ 0.09
C11orf54-210ENST00000531516 AOC2O75106 756 aa15.63■□□□□ 0.09
C11orf54-210ENST00000531516 IL15P40933 162 aaPredicted RBP15.63■□□□□ 0.09
C11orf54-210ENST00000531516 PTPN12Q05209 780 aaKnown RBP15.63■□□□□ 0.09
C11orf54-210ENST00000531516 CHAF1AQ13111 956 aaPredicted RBP15.63■□□□□ 0.09
C11orf54-210ENST00000531516 CFAP100Q494V2 611 aa15.63■□□□□ 0.09
C11orf54-210ENST00000531516 FBXO33Q7Z6M2 555 aa15.63■□□□□ 0.09
C11orf54-210ENST00000531516 KLHDC4Q8TBB5 520 aa15.63■□□□□ 0.09
C11orf54-210ENST00000531516 SIL1Q9H173 461 aa15.63■□□□□ 0.09
C11orf54-210ENST00000531516 SERPINA10Q9UK55 444 aa15.63■□□□□ 0.09
C11orf54-210ENST00000531516 SCN9AQ15858 1988 aa15.63■□□□□ 0.09
C11orf54-210ENST00000531516 ZBED9Q6R2W3 1325 aa15.63■□□□□ 0.09
C11orf54-210ENST00000531516 GNAI2P04899 355 aa15.62■□□□□ 0.09
C11orf54-210ENST00000531516 TRIM27P14373 513 aa15.62■□□□□ 0.09
C11orf54-210ENST00000531516 SUPT20HL1Q3ZLR7 823 aa15.62■□□□□ 0.09
C11orf54-210ENST00000531516 DLK2Q6UY11 383 aa15.62■□□□□ 0.09
C11orf54-210ENST00000531516 CERS5Q8N5B7 392 aa15.62■□□□□ 0.09
C11orf54-210ENST00000531516 MEIS3Q99687 375 aa15.62■□□□□ 0.09
C11orf54-210ENST00000531516 VEZTQ9HBM0 779 aa15.62■□□□□ 0.09
C11orf54-210ENST00000531516 MAST3O60307 1309 aa15.62■□□□□ 0.09
C11orf54-210ENST00000531516 TRPM7Q96QT4 1865 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 SPDYE2BA6NHP3 402 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 SRGAP3O43295 1099 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 PPP1R12BO60237 982 aaPredicted RBP15.61■□□□□ 0.09
C11orf54-210ENST00000531516 BCAR3O75815 825 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 SPDYE6P0CI01 402 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 RFX5P48382 616 aaPredicted RBP15.61■□□□□ 0.09
C11orf54-210ENST00000531516 TNNI2P48788 182 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 LBX1P52954 281 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 ATP2B3Q16720 1220 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 VGLL2Q8N8G2 317 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 WDR66Q8TBY9 1149 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 CLUAP1Q96AJ1 413 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 DEFB129Q9H1M3 183 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 TMOD2Q9NZR1 351 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 AKAP2Q9Y2D5 859 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 SUGT1Q9Y2Z0 365 aa15.61■□□□□ 0.09
C11orf54-210ENST00000531516 COL1A1P02452 1464 aaPredicted RBP15.6■□□□□ 0.09
C11orf54-210ENST00000531516 MS4A1P11836 297 aa15.6■□□□□ 0.09
C11orf54-210ENST00000531516 BCAMP50895 628 aa15.6■□□□□ 0.09
C11orf54-210ENST00000531516 HDLBPQ00341 1268 aaKnown RBP15.6■□□□□ 0.09
C11orf54-210ENST00000531516 ZBED3Q96IU2 234 aaPredicted RBP15.6■□□□□ 0.09
C11orf54-210ENST00000531516 COPRSQ9NQ92 184 aa15.6■□□□□ 0.09
C11orf54-210ENST00000531516 IQSEC3Q9UPP2 1182 aaPredicted RBP15.6■□□□□ 0.09
C11orf54-210ENST00000531516 TEKT1Q969V4 418 aa15.59■□□□□ 0.09
C11orf54-210ENST00000531516 PSME4Q14997 1843 aa15.59■□□□□ 0.09
C11orf54-210ENST00000531516 CLRN2A0PK11 232 aa15.58■□□□□ 0.08
C11orf54-210ENST00000531516 SEMA3EO15041 775 aa15.58■□□□□ 0.08
C11orf54-210ENST00000531516 SLC10A3P09131 477 aa15.58■□□□□ 0.08
C11orf54-210ENST00000531516 HSPA8P11142 646 aaKnown RBP15.58■□□□□ 0.08
C11orf54-210ENST00000531516 FGFR2P21802 821 aa15.58■□□□□ 0.08
C11orf54-210ENST00000531516 PRAMEF18Q5VWM3 479 aa15.58■□□□□ 0.08
C11orf54-210ENST00000531516 ATG9AQ7Z3C6 839 aa15.58■□□□□ 0.08
C11orf54-210ENST00000531516 PRMT6Q96LA8 375 aaPredicted RBP15.58■□□□□ 0.08
C11orf54-210ENST00000531516 SCAF8Q9UPN6 1271 aaKnown RBP15.58■□□□□ 0.08
C11orf54-210ENST00000531516 PCNTO95613 3336 aa15.58■□□□□ 0.08
C11orf54-210ENST00000531516 UBE2Q2LH0YL09 131 aa15.57■□□□□ 0.08
C11orf54-210ENST00000531516 CRKP46108 304 aa15.57■□□□□ 0.08
C11orf54-210ENST00000531516 KIF23Q02241 960 aaPredicted RBP15.57■□□□□ 0.08
C11orf54-210ENST00000531516 G3BP1Q13283 466 aaKnown RBP eCLIP15.57■□□□□ 0.08
C11orf54-210ENST00000531516 MTX1Q13505 466 aa15.57■□□□□ 0.08
C11orf54-210ENST00000531516 DZIP1LQ8IYY4 767 aaKnown RBP15.57■□□□□ 0.08
C11orf54-210ENST00000531516 ZGPATQ8N5A5 531 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms