RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 ARMC9Q7Z3E5 817 aa16.22■□□□□ 0.19
TM9SF1-211ENST00000531406 DEFB129Q9H1M3 183 aa16.22■□□□□ 0.19
TM9SF1-211ENST00000531406 CNNM1Q9NRU3 951 aa16.22■□□□□ 0.19
TM9SF1-211ENST00000531406 TM4SF4P48230 202 aa16.21■□□□□ 0.19
TM9SF1-211ENST00000531406 FKBP1AP62942 108 aaKnown RBP16.21■□□□□ 0.19
TM9SF1-211ENST00000531406 LDLRAD1Q5T700 205 aa16.21■□□□□ 0.19
TM9SF1-211ENST00000531406 PCDHAC2Q9Y5I4 1007 aa16.21■□□□□ 0.19
TM9SF1-211ENST00000531406 ZNF646O15015 1829 aaPredicted RBP16.21■□□□□ 0.19
TM9SF1-211ENST00000531406 F8W031 263 aaPredicted RBP16.2■□□□□ 0.18
TM9SF1-211ENST00000531406 MKRN3Q13064 507 aaKnown RBP16.2■□□□□ 0.18
TM9SF1-211ENST00000531406 CFAP100Q494V2 611 aa16.2■□□□□ 0.18
TM9SF1-211ENST00000531406 KAZALD1Q96I82 304 aa16.2■□□□□ 0.18
TM9SF1-211ENST00000531406 SUCLG2Q96I99 432 aa16.2■□□□□ 0.18
TM9SF1-211ENST00000531406 JAG2Q9Y219 1238 aa16.2■□□□□ 0.18
TM9SF1-211ENST00000531406 CASP8AP2Q9UKL3 1982 aa16.2■□□□□ 0.18
TM9SF1-211ENST00000531406 ZNF521Q96K83 1311 aa16.19■□□□□ 0.18
TM9SF1-211ENST00000531406 TBC1D8O95759 1140 aa16.19■□□□□ 0.18
TM9SF1-211ENST00000531406 CTU1Q7Z7A3 348 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-211ENST00000531406 ANGEL1Q9UNK9 670 aaKnown RBP16.19■□□□□ 0.18
TM9SF1-211ENST00000531406 FAM205AQ6ZU69 1335 aa16.19■□□□□ 0.18
TM9SF1-211ENST00000531406 SPDYE2BA6NHP3 402 aa16.18■□□□□ 0.18
TM9SF1-211ENST00000531406 NBPF7P0C2Y1 421 aaPredicted RBP16.18■□□□□ 0.18
TM9SF1-211ENST00000531406 SPDYE6P0CI01 402 aa16.18■□□□□ 0.18
TM9SF1-211ENST00000531406 UBE4AQ14139 1066 aa16.18■□□□□ 0.18
TM9SF1-211ENST00000531406 PRMT6Q96LA8 375 aaPredicted RBP16.18■□□□□ 0.18
TM9SF1-211ENST00000531406 PUS3Q9BZE2 481 aaKnown RBP16.18■□□□□ 0.18
TM9SF1-211ENST00000531406 FZD1Q9UP38 647 aa16.18■□□□□ 0.18
TM9SF1-211ENST00000531406 PPP2R3BQ9Y5P8 575 aa16.18■□□□□ 0.18
TM9SF1-211ENST00000531406 UTYO14607 1347 aa16.18■□□□□ 0.18
TM9SF1-211ENST00000531406 COL1A1P02452 1464 aaPredicted RBP16.17■□□□□ 0.18
TM9SF1-211ENST00000531406 CLRN2A0PK11 232 aa16.17■□□□□ 0.18
TM9SF1-211ENST00000531406 MYO1BO43795 1136 aa16.17■□□□□ 0.18
TM9SF1-211ENST00000531406 HIBADHP31937 336 aaKnown RBP16.17■□□□□ 0.18
TM9SF1-211ENST00000531406 GYG1P46976 350 aa16.17■□□□□ 0.18
TM9SF1-211ENST00000531406 SREBF2Q12772 1141 aa16.17■□□□□ 0.18
TM9SF1-211ENST00000531406 SPRYD7Q5W111 196 aa16.17■□□□□ 0.18
TM9SF1-211ENST00000531406 MRPL50Q8N5N7 158 aaKnown RBP16.17■□□□□ 0.18
TM9SF1-211ENST00000531406 TDRD7Q8NHU6 1098 aaKnown RBP16.17■□□□□ 0.18
TM9SF1-211ENST00000531406 ZNF296Q8WUU4 475 aaPredicted RBP16.17■□□□□ 0.18
TM9SF1-211ENST00000531406 FAM84BQ96KN1 310 aaPredicted RBP16.17■□□□□ 0.18
TM9SF1-211ENST00000531406 AOX1Q06278 1338 aa16.17■□□□□ 0.18
TM9SF1-211ENST00000531406 PPP1R12BO60237 982 aaPredicted RBP16.16■□□□□ 0.18
TM9SF1-211ENST00000531406 MAP3K11Q16584 847 aa16.16■□□□□ 0.18
TM9SF1-211ENST00000531406 SLC10A4Q96EP9 437 aa16.16■□□□□ 0.18
TM9SF1-211ENST00000531406 RIPOR2Q9Y4F9 1068 aa16.16■□□□□ 0.18
TM9SF1-211ENST00000531406 GPR25O00155 361 aa16.15■□□□□ 0.18
TM9SF1-211ENST00000531406 RBM5P52756 815 aaKnown RBP eCLIP16.15■□□□□ 0.18
TM9SF1-211ENST00000531406 SUPT20HL1Q3ZLR7 823 aa16.15■□□□□ 0.18
TM9SF1-211ENST00000531406 NOM1Q5C9Z4 860 aaKnown RBP16.15■□□□□ 0.18
TM9SF1-211ENST00000531406 VEZTQ9HBM0 779 aa16.15■□□□□ 0.18
TM9SF1-211ENST00000531406 MROH5Q6ZUA9 1318 aa16.15■□□□□ 0.18
TM9SF1-211ENST00000531406 SSC5DA1L4H1 1573 aa16.14■□□□□ 0.17
TM9SF1-211ENST00000531406 RASA3Q14644 834 aa16.14■□□□□ 0.17
TM9SF1-211ENST00000531406 RABL6Q3YEC7 729 aaPredicted RBP16.14■□□□□ 0.17
TM9SF1-211ENST00000531406 MFSD14BQ5SR56 506 aa16.14■□□□□ 0.17
TM9SF1-211ENST00000531406 NBPF12Q5TAG4 269 aaPredicted RBP16.14■□□□□ 0.17
TM9SF1-211ENST00000531406 ANKRD44Q8N8A2 993 aa16.14■□□□□ 0.17
TM9SF1-211ENST00000531406 CLMNQ96JQ2 1002 aa16.14■□□□□ 0.17
TM9SF1-211ENST00000531406 CFHR5Q9BXR6 569 aa16.14■□□□□ 0.17
TM9SF1-211ENST00000531406 BICC1Q9H694 974 aaKnown RBP16.14■□□□□ 0.17
TM9SF1-211ENST00000531406 TTF2Q9UNY4 1162 aaKnown RBP16.14■□□□□ 0.17
TM9SF1-211ENST00000531406 CACNA1FO60840 1977 aa16.14■□□□□ 0.17
TM9SF1-211ENST00000531406 UNCXA6NJT0 531 aa16.13■□□□□ 0.17
TM9SF1-211ENST00000531406 SOX10P56693 466 aa16.13■□□□□ 0.17
TM9SF1-211ENST00000531406 INHBEP58166 350 aa16.13■□□□□ 0.17
TM9SF1-211ENST00000531406 PKN2Q16513 984 aaKnown RBP16.13■□□□□ 0.17
TM9SF1-211ENST00000531406 FBXO33Q7Z6M2 555 aa16.13■□□□□ 0.17
TM9SF1-211ENST00000531406 R3HDMLQ9H3Y0 253 aa16.13■□□□□ 0.17
TM9SF1-211ENST00000531406 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.13■□□□□ 0.17
TM9SF1-211ENST00000531406 ZNF70Q9UC06 446 aaPredicted RBP16.13■□□□□ 0.17
TM9SF1-211ENST00000531406 SERPINA10Q9UK55 444 aa16.13■□□□□ 0.17
TM9SF1-211ENST00000531406 HPS5Q9UPZ3 1129 aa16.13■□□□□ 0.17
TM9SF1-211ENST00000531406 PTPRCP08575 1304 aa16.13■□□□□ 0.17
TM9SF1-211ENST00000531406 MANSC4A6NHS7 340 aaPredicted RBP16.12■□□□□ 0.17
TM9SF1-211ENST00000531406 E9PSI1 815 aa16.12■□□□□ 0.17
TM9SF1-211ENST00000531406 USP2O75604 605 aaPredicted RBP16.12■□□□□ 0.17
TM9SF1-211ENST00000531406 ALDH1A1P00352 501 aa16.12■□□□□ 0.17
TM9SF1-211ENST00000531406 ZBTB48P10074 688 aaPredicted RBP16.12■□□□□ 0.17
TM9SF1-211ENST00000531406 SPDYE2Q495Y8 402 aa16.12■□□□□ 0.17
TM9SF1-211ENST00000531406 LRRC24Q50LG9 513 aa16.12■□□□□ 0.17
TM9SF1-211ENST00000531406 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
TM9SF1-211ENST00000531406 WNK4Q96J92 1243 aa16.12■□□□□ 0.17
TM9SF1-211ENST00000531406 FKTNO75072 461 aa16.11■□□□□ 0.17
TM9SF1-211ENST00000531406 IREB2P48200 963 aaKnown RBP16.11■□□□□ 0.17
TM9SF1-211ENST00000531406 METTL24Q5JXM2 366 aa16.11■□□□□ 0.17
TM9SF1-211ENST00000531406 DZIP1LQ8IYY4 767 aaKnown RBP16.11■□□□□ 0.17
TM9SF1-211ENST00000531406 TDRD3Q9H7E2 651 aaKnown RBP16.11■□□□□ 0.17
TM9SF1-211ENST00000531406 AKAP11Q9UKA4 1901 aa16.1■□□□□ 0.17
TM9SF1-211ENST00000531406 PDE8BO95263 885 aa16.1■□□□□ 0.17
TM9SF1-211ENST00000531406 CRKP46108 304 aa16.1■□□□□ 0.17
TM9SF1-211ENST00000531406 SLFN5Q08AF3 891 aa16.1■□□□□ 0.17
TM9SF1-211ENST00000531406 TNFAIP1Q13829 316 aa16.1■□□□□ 0.17
TM9SF1-211ENST00000531406 GRIK5Q16478 980 aa16.1■□□□□ 0.17
TM9SF1-211ENST00000531406 VPS37DQ86XT2 251 aa16.1■□□□□ 0.17
TM9SF1-211ENST00000531406 IFNL1Q8IU54 200 aa16.1■□□□□ 0.17
TM9SF1-211ENST00000531406 VGLL2Q8N8G2 317 aa16.1■□□□□ 0.17
TM9SF1-211ENST00000531406 USP44Q9H0E7 712 aa16.1■□□□□ 0.17
TM9SF1-211ENST00000531406 IQSEC3Q9UPP2 1182 aaPredicted RBP16.1■□□□□ 0.17
TM9SF1-211ENST00000531406 A0A1B0GUL6 1792 aa16.1■□□□□ 0.17
TM9SF1-211ENST00000531406 IGF2BP3O00425 579 aaKnown RBP eCLIP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms