RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 C15orf52Q6ZUT6 534 aaKnown RBP23.41■■□□□ 1.34
SSSCA1-206ENST00000531405 ARMC9Q7Z3E5 817 aa23.41■■□□□ 1.34
SSSCA1-206ENST00000531405 ZNF296Q8WUU4 475 aaPredicted RBP23.41■■□□□ 1.34
SSSCA1-206ENST00000531405 SSC5DA1L4H1 1573 aa23.4■■□□□ 1.34
SSSCA1-206ENST00000531405 ANP32CO43423 234 aa23.4■■□□□ 1.34
SSSCA1-206ENST00000531405 PLIN1O60240 522 aa23.4■■□□□ 1.34
SSSCA1-206ENST00000531405 TM4SF4P48230 202 aa23.4■■□□□ 1.34
SSSCA1-206ENST00000531405 ZNF804AQ7Z570 1209 aa23.4■■□□□ 1.34
SSSCA1-206ENST00000531405 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.4■■□□□ 1.34
SSSCA1-206ENST00000531405 ANGEL1Q9UNK9 670 aaKnown RBP23.4■■□□□ 1.34
SSSCA1-206ENST00000531405 COL1A1P02452 1464 aaPredicted RBP23.4■■□□□ 1.34
SSSCA1-206ENST00000531405 OTOFQ9HC10 1997 aa23.4■■□□□ 1.34
SSSCA1-206ENST00000531405 GRM8O00222 908 aa23.39■■□□□ 1.33
SSSCA1-206ENST00000531405 IL1R1P14778 569 aa23.39■■□□□ 1.33
SSSCA1-206ENST00000531405 DEFB129Q9H1M3 183 aa23.39■■□□□ 1.33
SSSCA1-206ENST00000531405 AOX1Q06278 1338 aa23.38■■□□□ 1.33
SSSCA1-206ENST00000531405 CCDC57Q2TAC2 916 aa23.38■■□□□ 1.33
SSSCA1-206ENST00000531405 TAF7LQ5H9L4 462 aa23.38■■□□□ 1.33
SSSCA1-206ENST00000531405 LDLRAD1Q5T700 205 aa23.38■■□□□ 1.33
SSSCA1-206ENST00000531405 CLRN2A0PK11 232 aa23.37■■□□□ 1.33
SSSCA1-206ENST00000531405 CFAP100Q494V2 611 aa23.37■■□□□ 1.33
SSSCA1-206ENST00000531405 LDHAL6AQ6ZMR3 332 aa23.37■■□□□ 1.33
SSSCA1-206ENST00000531405 MTMR14Q8NCE2 650 aa23.37■■□□□ 1.33
SSSCA1-206ENST00000531405 CNNM1Q9NRU3 951 aa23.37■■□□□ 1.33
SSSCA1-206ENST00000531405 HPS5Q9UPZ3 1129 aa23.37■■□□□ 1.33
SSSCA1-206ENST00000531405 HTTP42858 3142 aa23.37■■□□□ 1.33
SSSCA1-206ENST00000531405 SREBF2Q12772 1141 aa23.36■■□□□ 1.33
SSSCA1-206ENST00000531405 SPRYD7Q5W111 196 aa23.36■■□□□ 1.33
SSSCA1-206ENST00000531405 SLC4A10Q6U841 1118 aa23.36■■□□□ 1.33
SSSCA1-206ENST00000531405 PRMT6Q96LA8 375 aaPredicted RBP23.36■■□□□ 1.33
SSSCA1-206ENST00000531405 R3HDMLQ9H3Y0 253 aa23.36■■□□□ 1.33
SSSCA1-206ENST00000531405 C9orf78Q9NZ63 289 aaPredicted RBP23.36■■□□□ 1.33
SSSCA1-206ENST00000531405 SPDYE2BA6NHP3 402 aa23.35■■□□□ 1.33
SSSCA1-206ENST00000531405 GPR25O00155 361 aa23.35■■□□□ 1.33
SSSCA1-206ENST00000531405 SPDYE6P0CI01 402 aa23.35■■□□□ 1.33
SSSCA1-206ENST00000531405 CENPFP49454 3210 aa23.34■■□□□ 1.33
SSSCA1-206ENST00000531405 SLC34A2O95436 690 aa23.34■■□□□ 1.33
SSSCA1-206ENST00000531405 FAM9BQ8IZU0 186 aa23.34■■□□□ 1.33
SSSCA1-206ENST00000531405 CLMNQ96JQ2 1002 aa23.34■■□□□ 1.33
SSSCA1-206ENST00000531405 VEZTQ9HBM0 779 aa23.34■■□□□ 1.33
SSSCA1-206ENST00000531405 MYO1BO43795 1136 aa23.33■■□□□ 1.33
SSSCA1-206ENST00000531405 FKBP1AP62942 108 aaKnown RBP23.33■■□□□ 1.33
SSSCA1-206ENST00000531405 ALDH1L1O75891 902 aa23.32■■□□□ 1.32
SSSCA1-206ENST00000531405 RBM5P52756 815 aaKnown RBP eCLIP23.32■■□□□ 1.32
SSSCA1-206ENST00000531405 SLC10A4Q96EP9 437 aa23.32■■□□□ 1.32
SSSCA1-206ENST00000531405 SUCLG2Q96I99 432 aa23.32■■□□□ 1.32
SSSCA1-206ENST00000531405 PUS3Q9BZE2 481 aaKnown RBP23.32■■□□□ 1.32
SSSCA1-206ENST00000531405 SRCIN1Q9C0H9 1055 aa23.32■■□□□ 1.32
SSSCA1-206ENST00000531405 PPP2R3BQ9Y5P8 575 aa23.32■■□□□ 1.32
SSSCA1-206ENST00000531405 MYH13Q9UKX3 1938 aa23.31■■□□□ 1.32
SSSCA1-206ENST00000531405 GYG1P46976 350 aa23.31■■□□□ 1.32
SSSCA1-206ENST00000531405 PKN2Q16513 984 aaKnown RBP23.31■■□□□ 1.32
SSSCA1-206ENST00000531405 MAP3K11Q16584 847 aa23.31■■□□□ 1.32
SSSCA1-206ENST00000531405 NBPF12Q5TAG4 269 aaPredicted RBP23.31■■□□□ 1.32
SSSCA1-206ENST00000531405 KAZALD1Q96I82 304 aa23.31■■□□□ 1.32
SSSCA1-206ENST00000531405 PPP1R12BO60237 982 aaPredicted RBP23.3■■□□□ 1.32
SSSCA1-206ENST00000531405 FKTNO75072 461 aa23.3■■□□□ 1.32
SSSCA1-206ENST00000531405 NOM1Q5C9Z4 860 aaKnown RBP23.3■■□□□ 1.32
SSSCA1-206ENST00000531405 WNK4Q96J92 1243 aa23.3■■□□□ 1.32
SSSCA1-206ENST00000531405 CFHR5Q9BXR6 569 aa23.3■■□□□ 1.32
SSSCA1-206ENST00000531405 FAM205AQ6ZU69 1335 aa23.3■■□□□ 1.32
SSSCA1-206ENST00000531405 ZNF316A6NFI3 1004 aaPredicted RBP23.29■■□□□ 1.32
SSSCA1-206ENST00000531405 NBPF7P0C2Y1 421 aaPredicted RBP23.29■■□□□ 1.32
SSSCA1-206ENST00000531405 MFSD14BQ5SR56 506 aa23.29■■□□□ 1.32
SSSCA1-206ENST00000531405 TDRD7Q8NHU6 1098 aaKnown RBP23.29■■□□□ 1.32
SSSCA1-206ENST00000531405 MANSC4A6NHS7 340 aaPredicted RBP23.28■■□□□ 1.32
SSSCA1-206ENST00000531405 UBE4AQ14139 1066 aa23.28■■□□□ 1.32
SSSCA1-206ENST00000531405 RASA3Q14644 834 aa23.28■■□□□ 1.32
SSSCA1-206ENST00000531405 SUPT20HL1Q3ZLR7 823 aa23.28■■□□□ 1.32
SSSCA1-206ENST00000531405 IFNL1Q8IU54 200 aa23.28■■□□□ 1.32
SSSCA1-206ENST00000531405 FAM84BQ96KN1 310 aaPredicted RBP23.28■■□□□ 1.32
SSSCA1-206ENST00000531405 TTF2Q9UNY4 1162 aaKnown RBP23.28■■□□□ 1.32
SSSCA1-206ENST00000531405 IGF2BP3O00425 579 aaKnown RBP eCLIP23.27■■□□□ 1.32
SSSCA1-206ENST00000531405 ZBTB48P10074 688 aaPredicted RBP23.27■■□□□ 1.32
SSSCA1-206ENST00000531405 HIBADHP31937 336 aaKnown RBP23.27■■□□□ 1.32
SSSCA1-206ENST00000531405 USP2O75604 605 aaPredicted RBP23.26■■□□□ 1.31
SSSCA1-206ENST00000531405 ALDH1A1P00352 501 aa23.26■■□□□ 1.31
SSSCA1-206ENST00000531405 GJA5P36382 358 aa23.26■■□□□ 1.31
SSSCA1-206ENST00000531405 FBXO46Q6PJ61 603 aaPredicted RBP23.26■■□□□ 1.31
SSSCA1-206ENST00000531405 BICC1Q9H694 974 aaKnown RBP23.26■■□□□ 1.31
SSSCA1-206ENST00000531405 TDRD3Q9H7E2 651 aaKnown RBP23.26■■□□□ 1.31
SSSCA1-206ENST00000531405 ZNF70Q9UC06 446 aaPredicted RBP23.26■■□□□ 1.31
SSSCA1-206ENST00000531405 IQSEC3Q9UPP2 1182 aaPredicted RBP23.26■■□□□ 1.31
SSSCA1-206ENST00000531405 SPDYE2Q495Y8 402 aa23.25■■□□□ 1.31
SSSCA1-206ENST00000531405 CDAN1Q8IWY9 1227 aa23.25■■□□□ 1.31
SSSCA1-206ENST00000531405 RIPOR2Q9Y4F9 1068 aa23.25■■□□□ 1.31
SSSCA1-206ENST00000531405 UTYO14607 1347 aa23.25■■□□□ 1.31
SSSCA1-206ENST00000531405 MKI67P46013 3256 aaKnown RBP23.24■■□□□ 1.31
SSSCA1-206ENST00000531405 IREB2P48200 963 aaKnown RBP23.24■■□□□ 1.31
SSSCA1-206ENST00000531405 INHBEP58166 350 aa23.24■■□□□ 1.31
SSSCA1-206ENST00000531405 GRIK5Q16478 980 aa23.24■■□□□ 1.31
SSSCA1-206ENST00000531405 SERPINA10Q9UK55 444 aa23.24■■□□□ 1.31
SSSCA1-206ENST00000531405 ZNF521Q96K83 1311 aa23.24■■□□□ 1.31
SSSCA1-206ENST00000531405 LRRC24Q50LG9 513 aa23.23■■□□□ 1.31
SSSCA1-206ENST00000531405 DZIP1LQ8IYY4 767 aaKnown RBP23.23■■□□□ 1.31
SSSCA1-206ENST00000531405 ANKRD44Q8N8A2 993 aa23.23■■□□□ 1.31
SSSCA1-206ENST00000531405 MROH5Q6ZUA9 1318 aa23.23■■□□□ 1.31
SSSCA1-206ENST00000531405 UNCXA6NJT0 531 aa23.22■■□□□ 1.31
SSSCA1-206ENST00000531405 RABL6Q3YEC7 729 aaPredicted RBP23.22■■□□□ 1.31
SSSCA1-206ENST00000531405 ANKRD13AQ8IZ07 590 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms