RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 KAT14Q9H8E8 782 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 PRDM16Q9HAZ2 1276 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 TULP4Q9NRJ4 1543 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 RPGRIP1LQ68CZ1 1315 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 ATXN2Q99700 1313 aaKnown RBP8.94□□□□□ -0.98
PTPRK-219ENST00000531050 ADCY9O60503 1353 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 KIF24Q5T7B8 1368 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 NRDCO43847 1150 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 ERLIN1O75477 346 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 PECAM1P16284 738 aaPredicted RBP8.94□□□□□ -0.98
PTPRK-219ENST00000531050 RAB27AP51159 221 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 IRAK1P51617 712 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 CHMP4BP1P59074 171 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 GNG11P61952 73 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 FAM177A1Q8N128 213 aaPredicted RBP8.94□□□□□ -0.98
PTPRK-219ENST00000531050 CEP112Q8N8E3 955 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 DRAXINQ8NBI3 349 aaPredicted RBP8.94□□□□□ -0.98
PTPRK-219ENST00000531050 ZBTB10Q96DT7 871 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 SCAND2PQ9GZW5 306 aaPredicted RBP8.94□□□□□ -0.98
PTPRK-219ENST00000531050 ZSWIM4Q9H7M6 989 aa8.94□□□□□ -0.98
PTPRK-219ENST00000531050 TFIP11Q9UBB9 837 aaKnown RBP8.94□□□□□ -0.98
PTPRK-219ENST00000531050 VSNL1P62760 191 aa8.93□□□□□ -0.98
PTPRK-219ENST00000531050 DNAJC14Q6Y2X3 702 aaPredicted RBP8.93□□□□□ -0.98
PTPRK-219ENST00000531050 SRGAP1Q7Z6B7 1085 aa8.93□□□□□ -0.98
PTPRK-219ENST00000531050 EHD4Q9H223 541 aa8.93□□□□□ -0.98
PTPRK-219ENST00000531050 KLC4Q9NSK0 619 aa8.93□□□□□ -0.98
PTPRK-219ENST00000531050 SNX14Q9Y5W7 946 aa8.93□□□□□ -0.98
PTPRK-219ENST00000531050 POTEB2H3BUK9 544 aa8.93□□□□□ -0.98
PTPRK-219ENST00000531050 IGSF22Q8N9C0 903 aa8.93□□□□□ -0.98
PTPRK-219ENST00000531050 PIK3R5Q8WYR1 880 aa8.93□□□□□ -0.98
PTPRK-219ENST00000531050 PSMD1Q99460 953 aa8.93□□□□□ -0.98
PTPRK-219ENST00000531050 IFNKQ9P0W0 207 aa8.93□□□□□ -0.98
PTPRK-219ENST00000531050 SALL3Q9BXA9 1300 aa8.93□□□□□ -0.98
PTPRK-219ENST00000531050 CUTAO60888 179 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 RASSF9O75901 435 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 PDCD2Q16342 344 aaPredicted RBP8.92□□□□□ -0.98
PTPRK-219ENST00000531050 RCSD1Q6JBY9 416 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 RPAP2Q8IXW5 612 aaPredicted RBP8.92□□□□□ -0.98
PTPRK-219ENST00000531050 TSPYL6Q8N831 410 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 IRX2Q9BZI1 471 aaPredicted RBP8.92□□□□□ -0.98
PTPRK-219ENST00000531050 HYPKQ9NX55 129 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 PPP2R2CQ9Y2T4 447 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 ZC3H4Q9UPT8 1303 aaKnown RBP8.92□□□□□ -0.98
PTPRK-219ENST00000531050 ZSCAN12O43309 604 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 WDHD1O75717 1129 aaPredicted RBP8.92□□□□□ -0.98
PTPRK-219ENST00000531050 NAA25Q14CX7 972 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 CCDC96Q2M329 555 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 CEP85LQ5SZL2 805 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 TMEM132EQ6IEE7 984 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 PPP4R3CPQ6ZMV5 832 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 FCHSD1Q86WN1 690 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 RASEFQ8IZ41 740 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 MAB21L3Q8N8X9 362 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 C3orf20Q8ND61 904 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 ANO10Q9NW15 660 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 GRIN2DO15399 1336 aa8.92□□□□□ -0.98
PTPRK-219ENST00000531050 MYO5BQ9ULV0 1848 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 EPB41L2O43491 1005 aaKnown RBP8.91□□□□□ -0.98
PTPRK-219ENST00000531050 CPA1P15085 419 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 PRPHP41219 470 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 SMTNP53814 917 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 SLC8A3P57103 927 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 CADPS2Q86UW7 1296 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 FAM228AQ86W67 206 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 SPDYE1Q8NFV5 336 aaPredicted RBP8.91□□□□□ -0.98
PTPRK-219ENST00000531050 BCAS4Q8TDM0 211 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 SMARCC1Q92922 1105 aaPredicted RBP8.91□□□□□ -0.98
PTPRK-219ENST00000531050 API5Q9BZZ5 524 aaKnown RBP8.91□□□□□ -0.98
PTPRK-219ENST00000531050 VIPAS39Q9H9C1 493 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 ATP6V0A4Q9HBG4 840 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 EVC2Q86UK5 1308 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 ADGRL3Q9HAR2 1447 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 TUBGCP6Q96RT7 1819 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 PYGLP06737 847 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 PEX19P40855 299 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 KRT24Q2M2I5 525 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 LARP1BQ659C4 914 aaKnown RBP8.91□□□□□ -0.98
PTPRK-219ENST00000531050 TTLL7Q6ZT98 887 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 CEP57L1Q8IYX8 460 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 LMBR1Q8WVP7 490 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 SLC12A5Q9H2X9 1139 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 RABEP2Q9H5N1 569 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 PUF60Q9UHX1 559 aaKnown RBP8.91□□□□□ -0.98
PTPRK-219ENST00000531050 SAMM50Q9Y512 469 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 PREX1Q8TCU6 1659 aa8.91□□□□□ -0.98
PTPRK-219ENST00000531050 EIF3HO15372 352 aaKnown RBP eCLIP8.9□□□□□ -0.982e-6■□□□□ 10.9
PTPRK-219ENST00000531050 RAPGEF3O95398 923 aa8.9□□□□□ -0.98
PTPRK-219ENST00000531050 KCNB1Q14721 858 aa8.9□□□□□ -0.98
PTPRK-219ENST00000531050 NFXL1Q6ZNB6 911 aa8.9□□□□□ -0.98
PTPRK-219ENST00000531050 TMEM139Q8IV31 216 aa8.9□□□□□ -0.98
PTPRK-219ENST00000531050 OR8K1Q8NGG5 319 aa8.9□□□□□ -0.98
PTPRK-219ENST00000531050 SPDL1Q96EA4 605 aa8.9□□□□□ -0.98
PTPRK-219ENST00000531050 LMCD1Q9NZU5 365 aa8.9□□□□□ -0.98
PTPRK-219ENST00000531050 SHTN1A0MZ66 631 aa8.9□□□□□ -0.99
PTPRK-219ENST00000531050 ENO4A6NNW6 628 aa8.9□□□□□ -0.99
PTPRK-219ENST00000531050 MEFVO15553 781 aaPredicted RBP8.9□□□□□ -0.99
PTPRK-219ENST00000531050 PPFIA2O75334 1257 aa8.9□□□□□ -0.99
PTPRK-219ENST00000531050 PDHBP11177 359 aa8.9□□□□□ -0.99
PTPRK-219ENST00000531050 NEFHP12036 1026 aa8.9□□□□□ -0.99
PTPRK-219ENST00000531050 PDE6BP35913 854 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms