RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 FKBP1AP62942 108 aaKnown RBP19■□□□□ 0.63
CAPN1-219ENST00000530495 MAP3K11Q16584 847 aa19■□□□□ 0.63
CAPN1-219ENST00000530495 BEND3Q5T5X7 828 aa19■□□□□ 0.63
CAPN1-219ENST00000530495 A0A1B0GUL6 1792 aa19■□□□□ 0.63
CAPN1-219ENST00000530495 INHBEP58166 350 aa18.99■□□□□ 0.63
CAPN1-219ENST00000530495 EXOSC9Q06265 439 aaKnown RBP18.99■□□□□ 0.63
CAPN1-219ENST00000530495 SLC10A4Q96EP9 437 aa18.99■□□□□ 0.63
CAPN1-219ENST00000530495 PPP2R3BQ9Y5P8 575 aa18.99■□□□□ 0.63
CAPN1-219ENST00000530495 UNCXA6NJT0 531 aa18.98■□□□□ 0.63
CAPN1-219ENST00000530495 F6X3S4 739 aa18.98■□□□□ 0.63
CAPN1-219ENST00000530495 FKTNO75072 461 aa18.98■□□□□ 0.63
CAPN1-219ENST00000530495 ALDH1A1P00352 501 aa18.98■□□□□ 0.63
CAPN1-219ENST00000530495 ZNF804AQ7Z570 1209 aa18.98■□□□□ 0.63
CAPN1-219ENST00000530495 R3HDMLQ9H3Y0 253 aa18.98■□□□□ 0.63
CAPN1-219ENST00000530495 FZD1Q9UP38 647 aa18.98■□□□□ 0.63
CAPN1-219ENST00000530495 MANSC4A6NHS7 340 aaPredicted RBP18.97■□□□□ 0.63
CAPN1-219ENST00000530495 MYO1BO43795 1136 aa18.97■□□□□ 0.63
CAPN1-219ENST00000530495 FBXO46Q6PJ61 603 aaPredicted RBP18.97■□□□□ 0.63
CAPN1-219ENST00000530495 LMBR1LQ6UX01 489 aa18.97■□□□□ 0.63
CAPN1-219ENST00000530495 PRMT6Q96LA8 375 aaPredicted RBP18.97■□□□□ 0.63
CAPN1-219ENST00000530495 CHMP3Q9Y3E7 222 aa18.97■□□□□ 0.63
CAPN1-219ENST00000530495 PCDHAC2Q9Y5I4 1007 aa18.97■□□□□ 0.63
CAPN1-219ENST00000530495 PDE4DIPQ5VU43 2346 aa18.97■□□□□ 0.63
CAPN1-219ENST00000530495 SPDYE2BA6NHP3 402 aa18.96■□□□□ 0.63
CAPN1-219ENST00000530495 PPP1R12BO60237 982 aaPredicted RBP18.96■□□□□ 0.63
CAPN1-219ENST00000530495 SPDYE6P0CI01 402 aa18.96■□□□□ 0.63
CAPN1-219ENST00000530495 ZBTB48P10074 688 aaPredicted RBP18.96■□□□□ 0.63
CAPN1-219ENST00000530495 CCDC57Q2TAC2 916 aa18.96■□□□□ 0.63
CAPN1-219ENST00000530495 SUPT20HL1Q3ZLR7 823 aa18.96■□□□□ 0.63
CAPN1-219ENST00000530495 CFAP100Q494V2 611 aa18.96■□□□□ 0.63
CAPN1-219ENST00000530495 EPHA10Q5JZY3 1008 aa18.96■□□□□ 0.63
CAPN1-219ENST00000530495 LDHAL6AQ6ZMR3 332 aa18.96■□□□□ 0.63
CAPN1-219ENST00000530495 LAMB1P07942 1786 aa18.96■□□□□ 0.63
CAPN1-219ENST00000530495 F8W031 263 aaPredicted RBP18.95■□□□□ 0.62
CAPN1-219ENST00000530495 IFNL1Q8IU54 200 aa18.95■□□□□ 0.62
CAPN1-219ENST00000530495 ZNF594Q96JF6 807 aaPredicted RBP18.95■□□□□ 0.62
CAPN1-219ENST00000530495 MRS2Q9HD23 443 aa18.95■□□□□ 0.62
CAPN1-219ENST00000530495 SALL2Q9Y467 1007 aaPredicted RBP18.95■□□□□ 0.62
CAPN1-219ENST00000530495 SSC5DA1L4H1 1573 aa18.94■□□□□ 0.62
CAPN1-219ENST00000530495 GRM8O00222 908 aa18.94■□□□□ 0.62
CAPN1-219ENST00000530495 CLMNQ96JQ2 1002 aa18.94■□□□□ 0.62
CAPN1-219ENST00000530495 CLRN2A0PK11 232 aa18.93■□□□□ 0.62
CAPN1-219ENST00000530495 PLIN1O60240 522 aa18.93■□□□□ 0.62
CAPN1-219ENST00000530495 TAF7LQ5H9L4 462 aa18.93■□□□□ 0.62
CAPN1-219ENST00000530495 NBPF12Q5TAG4 269 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-219ENST00000530495 WNK4Q96J92 1243 aa18.93■□□□□ 0.62
CAPN1-219ENST00000530495 SPINK5Q9NQ38 1064 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-219ENST00000530495 CNNM1Q9NRU3 951 aa18.93■□□□□ 0.62
CAPN1-219ENST00000530495 FAM205AQ6ZU69 1335 aa18.93■□□□□ 0.62
CAPN1-219ENST00000530495 USP2O75604 605 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-219ENST00000530495 ALDH1L1O75891 902 aa18.92■□□□□ 0.62
CAPN1-219ENST00000530495 TDRD7Q8NHU6 1098 aaKnown RBP18.92■□□□□ 0.62
CAPN1-219ENST00000530495 C9orf78Q9NZ63 289 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-219ENST00000530495 JAG2Q9Y219 1238 aa18.92■□□□□ 0.62
CAPN1-219ENST00000530495 AOX1Q06278 1338 aa18.92■□□□□ 0.62
CAPN1-219ENST00000530495 IREB2P48200 963 aaKnown RBP18.91■□□□□ 0.62
CAPN1-219ENST00000530495 RBM5P52756 815 aaKnown RBP eCLIP18.91■□□□□ 0.62
CAPN1-219ENST00000530495 UBE4AQ14139 1066 aa18.91■□□□□ 0.62
CAPN1-219ENST00000530495 RASA3Q14644 834 aa18.91■□□□□ 0.62
CAPN1-219ENST00000530495 PRPF38BQ5VTL8 546 aaKnown RBP18.91■□□□□ 0.62
CAPN1-219ENST00000530495 VEZTQ9HBM0 779 aa18.91■□□□□ 0.62
CAPN1-219ENST00000530495 PCDH10Q9P2E7 1040 aa18.91■□□□□ 0.62
CAPN1-219ENST00000530495 IGF2BP3O00425 579 aaKnown RBP eCLIP18.9■□□□□ 0.62
CAPN1-219ENST00000530495 ANKRD13AQ8IZ07 590 aa18.9■□□□□ 0.62
CAPN1-219ENST00000530495 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.9■□□□□ 0.62
CAPN1-219ENST00000530495 SERPINA10Q9UK55 444 aa18.9■□□□□ 0.62
CAPN1-219ENST00000530495 HIBADHP31937 336 aaKnown RBP18.89■□□□□ 0.61
CAPN1-219ENST00000530495 MFSD14BQ5SR56 506 aa18.89■□□□□ 0.61
CAPN1-219ENST00000530495 FAM84BQ96KN1 310 aaPredicted RBP18.89■□□□□ 0.61
CAPN1-219ENST00000530495 SRCIN1Q9C0H9 1055 aa18.89■□□□□ 0.61
CAPN1-219ENST00000530495 ZNF70Q9UC06 446 aaPredicted RBP18.89■□□□□ 0.61
CAPN1-219ENST00000530495 TESPA1A2RU30 521 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-219ENST00000530495 GJA5P36382 358 aa18.88■□□□□ 0.61
CAPN1-219ENST00000530495 GYG1P46976 350 aa18.88■□□□□ 0.61
CAPN1-219ENST00000530495 TNFAIP1Q13829 316 aa18.88■□□□□ 0.61
CAPN1-219ENST00000530495 SPDYE2Q495Y8 402 aa18.88■□□□□ 0.61
CAPN1-219ENST00000530495 OTUD7BQ6GQQ9 843 aa18.88■□□□□ 0.61
CAPN1-219ENST00000530495 SLC4A10Q6U841 1118 aa18.88■□□□□ 0.61
CAPN1-219ENST00000530495 KAZALD1Q96I82 304 aa18.88■□□□□ 0.61
CAPN1-219ENST00000530495 PUS3Q9BZE2 481 aaKnown RBP18.88■□□□□ 0.61
CAPN1-219ENST00000530495 TTF2Q9UNY4 1162 aaKnown RBP18.88■□□□□ 0.61
CAPN1-219ENST00000530495 OTOP1Q7RTM1 612 aa18.87■□□□□ 0.61
CAPN1-219ENST00000530495 TDRD3Q9H7E2 651 aaKnown RBP18.87■□□□□ 0.61
CAPN1-219ENST00000530495 RIPOR2Q9Y4F9 1068 aa18.87■□□□□ 0.61
CAPN1-219ENST00000530495 TRIM17Q9Y577 477 aa18.87■□□□□ 0.61
CAPN1-219ENST00000530495 UTYO14607 1347 aa18.86■□□□□ 0.61
CAPN1-219ENST00000530495 ANP32CO43423 234 aa18.86■□□□□ 0.61
CAPN1-219ENST00000530495 INTS3Q68E01 1043 aaKnown RBP18.86■□□□□ 0.61
CAPN1-219ENST00000530495 DZIP1LQ8IYY4 767 aaKnown RBP18.86■□□□□ 0.61
CAPN1-219ENST00000530495 ERO1AQ96HE7 468 aa18.86■□□□□ 0.61
CAPN1-219ENST00000530495 SUCLG2Q96I99 432 aa18.86■□□□□ 0.61
CAPN1-219ENST00000530495 TEPSINQ96N21 525 aa18.86■□□□□ 0.61
CAPN1-219ENST00000530495 PTPN18Q99952 460 aa18.86■□□□□ 0.61
CAPN1-219ENST00000530495 MROH5Q6ZUA9 1318 aa18.85■□□□□ 0.61
CAPN1-219ENST00000530495 NBPF7P0C2Y1 421 aaPredicted RBP18.85■□□□□ 0.61
CAPN1-219ENST00000530495 CRHR2Q13324 411 aa18.85■□□□□ 0.61
CAPN1-219ENST00000530495 OTOFQ9HC10 1997 aa18.84■□□□□ 0.61
CAPN1-219ENST00000530495 ARAP2Q8WZ64 1704 aa18.84■□□□□ 0.61
CAPN1-219ENST00000530495 CRKP46108 304 aa18.84■□□□□ 0.61
CAPN1-219ENST00000530495 FBXO33Q7Z6M2 555 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms