RNA–Protein interactions for RNA: ENST00000529759.1

LDLRAD3-204, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-204ENST00000529759 PRMT6Q96LA8 375 aaPredicted RBP13.64□□□□□ -0.23
LDLRAD3-204ENST00000529759 CD209Q9NNX6 404 aa13.64□□□□□ -0.23
LDLRAD3-204ENST00000529759 LEMD3Q9Y2U8 911 aa13.64□□□□□ -0.23
LDLRAD3-204ENST00000529759 TRIM17Q9Y577 477 aa13.64□□□□□ -0.23
LDLRAD3-204ENST00000529759 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
LDLRAD3-204ENST00000529759 ECM29Q5VYK3 1845 aa13.63□□□□□ -0.23
LDLRAD3-204ENST00000529759 USP2O75604 605 aaPredicted RBP13.63□□□□□ -0.23
LDLRAD3-204ENST00000529759 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
LDLRAD3-204ENST00000529759 CSF1RP07333 972 aa13.63□□□□□ -0.23
LDLRAD3-204ENST00000529759 EN2P19622 333 aaPredicted RBP13.63□□□□□ -0.23
LDLRAD3-204ENST00000529759 CD99L2Q8TCZ2 262 aa13.63□□□□□ -0.23
LDLRAD3-204ENST00000529759 CNKSR2Q8WXI2 1034 aa13.63□□□□□ -0.23
LDLRAD3-204ENST00000529759 MRS2Q9HD23 443 aa13.63□□□□□ -0.23
LDLRAD3-204ENST00000529759 ZSWIM8A7E2V4 1837 aa13.62□□□□□ -0.23
LDLRAD3-204ENST00000529759 NF2P35240 595 aa13.62□□□□□ -0.23
LDLRAD3-204ENST00000529759 SREBF2Q12772 1141 aa13.62□□□□□ -0.23
LDLRAD3-204ENST00000529759 FLIIQ13045 1269 aa13.62□□□□□ -0.23
LDLRAD3-204ENST00000529759 GCKRQ14397 625 aa13.62□□□□□ -0.23
LDLRAD3-204ENST00000529759 MAP3K11Q16584 847 aa13.62□□□□□ -0.23
LDLRAD3-204ENST00000529759 HABP4Q5JVS0 413 aaKnown RBP13.62□□□□□ -0.23
LDLRAD3-204ENST00000529759 APOBEC3FQ8IUX4 373 aaKnown RBP13.62□□□□□ -0.23
LDLRAD3-204ENST00000529759 LAMB1P07942 1786 aa13.62□□□□□ -0.23
LDLRAD3-204ENST00000529759 MYO3BQ8WXR4 1341 aa13.62□□□□□ -0.23
LDLRAD3-204ENST00000529759 OTOFQ9HC10 1997 aa13.62□□□□□ -0.23
LDLRAD3-204ENST00000529759 CRHR2Q13324 411 aa13.61□□□□□ -0.23
LDLRAD3-204ENST00000529759 DLGAP5Q15398 846 aa13.61□□□□□ -0.23
LDLRAD3-204ENST00000529759 CFAP100Q494V2 611 aa13.61□□□□□ -0.23
LDLRAD3-204ENST00000529759 EPHA10Q5JZY3 1008 aa13.61□□□□□ -0.23
LDLRAD3-204ENST00000529759 PLA2G12BQ9BX93 195 aa13.61□□□□□ -0.23
LDLRAD3-204ENST00000529759 MYH16Q9H6N6 1097 aa13.61□□□□□ -0.23
LDLRAD3-204ENST00000529759 IGHMBP2P38935 993 aaKnown RBP13.6□□□□□ -0.23
LDLRAD3-204ENST00000529759 FOXO4P98177 505 aa13.6□□□□□ -0.23
LDLRAD3-204ENST00000529759 FKBP5Q13451 457 aaPredicted RBP13.6□□□□□ -0.23
LDLRAD3-204ENST00000529759 GRIK5Q16478 980 aa13.6□□□□□ -0.23
LDLRAD3-204ENST00000529759 MTMR14Q8NCE2 650 aa13.6□□□□□ -0.23
LDLRAD3-204ENST00000529759 LINS1Q8NG48 757 aa13.6□□□□□ -0.23
LDLRAD3-204ENST00000529759 ZNF594Q96JF6 807 aaPredicted RBP13.6□□□□□ -0.23
LDLRAD3-204ENST00000529759 PTPN22Q9Y2R2 807 aa13.6□□□□□ -0.23
LDLRAD3-204ENST00000529759 SZT2Q5T011 3432 aa13.6□□□□□ -0.23
LDLRAD3-204ENST00000529759 CEP290O15078 2479 aa13.59□□□□□ -0.23
LDLRAD3-204ENST00000529759 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
LDLRAD3-204ENST00000529759 MANSC4A6NHS7 340 aaPredicted RBP13.59□□□□□ -0.23
LDLRAD3-204ENST00000529759 ANP32CO43423 234 aa13.59□□□□□ -0.23
LDLRAD3-204ENST00000529759 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
LDLRAD3-204ENST00000529759 ZEB1P37275 1124 aaPredicted RBP13.59□□□□□ -0.23
LDLRAD3-204ENST00000529759 WDR63Q8IWG1 891 aa13.59□□□□□ -0.23
LDLRAD3-204ENST00000529759 DNAAF4Q8WXU2 420 aa13.59□□□□□ -0.23
LDLRAD3-204ENST00000529759 ARAP2Q8WZ64 1704 aa13.59□□□□□ -0.23
LDLRAD3-204ENST00000529759 F6X3S4 739 aa13.58□□□□□ -0.24
LDLRAD3-204ENST00000529759 RASA3Q14644 834 aa13.58□□□□□ -0.24
LDLRAD3-204ENST00000529759 MS4A4AQ96JQ5 239 aa13.58□□□□□ -0.24
LDLRAD3-204ENST00000529759 MPHOSPH8Q99549 860 aa13.58□□□□□ -0.24
LDLRAD3-204ENST00000529759 ANKRD2Q9GZV1 360 aa13.58□□□□□ -0.24
LDLRAD3-204ENST00000529759 ELP3Q9H9T3 547 aa13.58□□□□□ -0.24
LDLRAD3-204ENST00000529759 VEZTQ9HBM0 779 aa13.58□□□□□ -0.24
LDLRAD3-204ENST00000529759 RBBP6Q7Z6E9 1792 aaKnown RBP13.58□□□□□ -0.24
LDLRAD3-204ENST00000529759 PLIN1O60240 522 aa13.57□□□□□ -0.24
LDLRAD3-204ENST00000529759 VAMP4O75379 141 aa13.57□□□□□ -0.24
LDLRAD3-204ENST00000529759 ZBTB48P10074 688 aaPredicted RBP13.57□□□□□ -0.24
LDLRAD3-204ENST00000529759 IL1R1P14778 569 aa13.57□□□□□ -0.24
LDLRAD3-204ENST00000529759 C15orf52Q6ZUT6 534 aaKnown RBP13.57□□□□□ -0.24
LDLRAD3-204ENST00000529759 TEPSINQ96N21 525 aa13.57□□□□□ -0.24
LDLRAD3-204ENST00000529759 TRIOBPQ9H2D6 2365 aa13.57□□□□□ -0.24
LDLRAD3-204ENST00000529759 TESPA1A2RU30 521 aaPredicted RBP13.56□□□□□ -0.24
LDLRAD3-204ENST00000529759 ALDH1A1P00352 501 aa13.56□□□□□ -0.24
LDLRAD3-204ENST00000529759 KCNJ4P48050 445 aa13.56□□□□□ -0.24
LDLRAD3-204ENST00000529759 INHBEP58166 350 aa13.56□□□□□ -0.24
LDLRAD3-204ENST00000529759 EXOSC9Q06265 439 aaKnown RBP13.56□□□□□ -0.24
LDLRAD3-204ENST00000529759 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.56□□□□□ -0.24
LDLRAD3-204ENST00000529759 BRI3BPQ8WY22 251 aa13.56□□□□□ -0.24
LDLRAD3-204ENST00000529759 ARMC5Q96C12 935 aa13.56□□□□□ -0.24
LDLRAD3-204ENST00000529759 TDRD3Q9H7E2 651 aaKnown RBP13.56□□□□□ -0.24
LDLRAD3-204ENST00000529759 ANKRD18BA2A2Z9 1011 aa13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 ZNF316A6NFI3 1004 aaPredicted RBP13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 PPP1R12BO60237 982 aaPredicted RBP13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 MYCP01106 439 aaPredicted RBP13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 MMP14P50281 582 aa13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 FXR1P51114 621 aaKnown RBP eCLIP13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 OPTNQ96CV9 577 aa13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 PUS3Q9BZE2 481 aaKnown RBP13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 ARHGAP39Q9C0H5 1083 aa13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 EFCC1Q9HA90 598 aa13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 ZNF70Q9UC06 446 aaPredicted RBP13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 SALL2Q9Y467 1007 aaPredicted RBP13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 PTCH2Q9Y6C5 1203 aa13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 COL1A1P02452 1464 aaPredicted RBP13.55□□□□□ -0.24
LDLRAD3-204ENST00000529759 ECM2O94769 699 aaPredicted RBP13.54□□□□□ -0.24
LDLRAD3-204ENST00000529759 GYG1P46976 350 aa13.54□□□□□ -0.24
LDLRAD3-204ENST00000529759 RBM5P52756 815 aaKnown RBP eCLIP13.54□□□□□ -0.24
LDLRAD3-204ENST00000529759 SP3Q02447 781 aa13.54□□□□□ -0.24
LDLRAD3-204ENST00000529759 LMBR1LQ6UX01 489 aa13.54□□□□□ -0.24
LDLRAD3-204ENST00000529759 FAM43AQ8N2R8 423 aa13.54□□□□□ -0.24
LDLRAD3-204ENST00000529759 TMEM39BQ9GZU3 492 aa13.54□□□□□ -0.24
LDLRAD3-204ENST00000529759 TCP10L2B9ZVM9 353 aa13.53□□□□□ -0.24
LDLRAD3-204ENST00000529759 CACNB3P54284 484 aa13.53□□□□□ -0.24
LDLRAD3-204ENST00000529759 SUPT20HL1Q3ZLR7 823 aa13.53□□□□□ -0.24
LDLRAD3-204ENST00000529759 SPDYE2Q495Y8 402 aa13.53□□□□□ -0.24
LDLRAD3-204ENST00000529759 BEND3Q5T5X7 828 aa13.53□□□□□ -0.24
LDLRAD3-204ENST00000529759 INTS3Q68E01 1043 aaKnown RBP13.53□□□□□ -0.24
LDLRAD3-204ENST00000529759 ERO1AQ96HE7 468 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms