RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 HDAC9Q9UKV0 1011 aa15.12■□□□□ 0.01
COPB1-206ENST00000529210 PAPPA2Q9BXP8 1791 aa15.11■□□□□ 0.01
COPB1-206ENST00000529210 FOXN1O15353 648 aa15.11■□□□□ 0.01
COPB1-206ENST00000529210 PLIN1O60240 522 aa15.11■□□□□ 0.01
COPB1-206ENST00000529210 UBTFL1P0CB47 393 aaPredicted RBP15.11■□□□□ 0.01
COPB1-206ENST00000529210 PTPN12Q05209 780 aaKnown RBP15.11■□□□□ 0.01
COPB1-206ENST00000529210 NBPF9Q3BBW0 867 aa15.11■□□□□ 0.01
COPB1-206ENST00000529210 COL13A1Q5TAT6 717 aaPredicted RBP15.11■□□□□ 0.01
COPB1-206ENST00000529210 FBXO33Q7Z6M2 555 aa15.11■□□□□ 0.01
COPB1-206ENST00000529210 C2orf69Q8N8R5 385 aa15.11■□□□□ 0.01
COPB1-206ENST00000529210 CDCA5Q96FF9 252 aa15.11■□□□□ 0.01
COPB1-206ENST00000529210 ZNF408Q9H9D4 720 aa15.11■□□□□ 0.01
COPB1-206ENST00000529210 PRDM10Q9NQV6 1147 aa15.11■□□□□ 0.01
COPB1-206ENST00000529210 COL1A1P02452 1464 aaPredicted RBP15.11■□□□□ 0.01
COPB1-206ENST00000529210 IPO8O15397 1037 aaKnown RBP15.1■□□□□ 0.01
COPB1-206ENST00000529210 FGFR2P21802 821 aa15.1■□□□□ 0.01
COPB1-206ENST00000529210 HIBADHP31937 336 aaKnown RBP15.1■□□□□ 0.01
COPB1-206ENST00000529210 CTCFP49711 727 aaPredicted RBP15.1■□□□□ 0.01
COPB1-206ENST00000529210 HUNKP57058 714 aa15.1■□□□□ 0.01
COPB1-206ENST00000529210 DLK2Q6UY11 383 aa15.1■□□□□ 0.01
COPB1-206ENST00000529210 KIAA0825Q8IV33 1275 aa15.1■□□□□ 0.01
COPB1-206ENST00000529210 FBXW7Q969H0 707 aa15.1■□□□□ 0.01
COPB1-206ENST00000529210 AIDAQ96BJ3 306 aa15.1■□□□□ 0.01
COPB1-206ENST00000529210 EYA2O00167 538 aa15.09■□□□□ 0.01
COPB1-206ENST00000529210 ZBTB22O15209 634 aa15.09■□□□□ 0.01
COPB1-206ENST00000529210 NOGQ13253 232 aa15.09■□□□□ 0.01
COPB1-206ENST00000529210 METTL24Q5JXM2 366 aa15.09■□□□□ 0.01
COPB1-206ENST00000529210 RGMBQ6NW40 437 aa15.09■□□□□ 0.01
COPB1-206ENST00000529210 CIAO1O76071 339 aa15.08■□□□□ 0
COPB1-206ENST00000529210 TRIM27P14373 513 aa15.08■□□□□ 0
COPB1-206ENST00000529210 GYG1P46976 350 aa15.08■□□□□ 0
COPB1-206ENST00000529210 HNRNPUQ00839 825 aaKnown RBP eCLIP15.08■□□□□ 0
COPB1-206ENST00000529210 ATF7IPQ6VMQ6 1270 aa15.08■□□□□ 0
COPB1-206ENST00000529210 ATG9AQ7Z3C6 839 aa15.08■□□□□ 0
COPB1-206ENST00000529210 APOBEC3FQ8IUX4 373 aaKnown RBP15.08■□□□□ 0
COPB1-206ENST00000529210 ZBED9Q6R2W3 1325 aa15.08■□□□□ 0
COPB1-206ENST00000529210 FAM155AB1AL88 458 aaPredicted RBP15.07■□□□□ 0
COPB1-206ENST00000529210 CA12O43570 354 aa15.07■□□□□ 0
COPB1-206ENST00000529210 GNAI3P08754 354 aa15.07■□□□□ 0
COPB1-206ENST00000529210 MTX1Q13505 466 aa15.07■□□□□ 0
COPB1-206ENST00000529210 PUM3Q15397 648 aaKnown RBP15.07■□□□□ 0
COPB1-206ENST00000529210 PAXIP1Q6ZW49 1069 aaPredicted RBP15.07■□□□□ 0
COPB1-206ENST00000529210 KLHDC4Q8TBB5 520 aa15.07■□□□□ 0
COPB1-206ENST00000529210 CCDC102AQ96A19 550 aa15.07■□□□□ 0
COPB1-206ENST00000529210 MEIS3Q99687 375 aa15.07■□□□□ 0
COPB1-206ENST00000529210 SPDYE2BA6NHP3 402 aa15.06■□□□□ 0
COPB1-206ENST00000529210 AOC2O75106 756 aa15.06■□□□□ 0
COPB1-206ENST00000529210 SPDYE6P0CI01 402 aa15.06■□□□□ 0
COPB1-206ENST00000529210 DLGAP5Q15398 846 aa15.06■□□□□ 0
COPB1-206ENST00000529210 CAVIN4Q5BKX8 364 aa15.06■□□□□ 0
COPB1-206ENST00000529210 MFSD14BQ5SR56 506 aa15.06■□□□□ 0
COPB1-206ENST00000529210 TBC1D22AQ8WUA7 517 aa15.06■□□□□ 0
COPB1-206ENST00000529210 LPIN2Q92539 896 aa15.06■□□□□ 0
COPB1-206ENST00000529210 COPRSQ9NQ92 184 aa15.06■□□□□ 0
COPB1-206ENST00000529210 SERPINA10Q9UK55 444 aa15.06■□□□□ 0
COPB1-206ENST00000529210 PPP2R3BQ9Y5P8 575 aa15.06■□□□□ 0
COPB1-206ENST00000529210 LRRFIP2Q9Y608 721 aaKnown RBP15.06■□□□□ 0
COPB1-206ENST00000529210 BCAR3O75815 825 aa15.05■□□□□ -0
COPB1-206ENST00000529210 SLC10A3P09131 477 aa15.05■□□□□ -0
COPB1-206ENST00000529210 IFIT1P09914 478 aaKnown RBP15.05■□□□□ -0
COPB1-206ENST00000529210 HSPA8P11142 646 aaKnown RBP15.05■□□□□ -0
COPB1-206ENST00000529210 HDLBPQ00341 1268 aaKnown RBP15.05■□□□□ -0
COPB1-206ENST00000529210 CFAP100Q494V2 611 aa15.05■□□□□ -0
COPB1-206ENST00000529210 MRIQ9BWK5 157 aa15.05■□□□□ -0
COPB1-206ENST00000529210 SUGT1Q9Y2Z0 365 aa15.05■□□□□ -0
COPB1-206ENST00000529210 IL15P40933 162 aaPredicted RBP15.04■□□□□ -0
COPB1-206ENST00000529210 VPS37DQ86XT2 251 aa15.04■□□□□ -0
COPB1-206ENST00000529210 BEGAINQ9BUH8 593 aa15.04■□□□□ -0
COPB1-206ENST00000529210 MYO1BO43795 1136 aa15.03■□□□□ -0
COPB1-206ENST00000529210 NF2P35240 595 aa15.03■□□□□ -0
COPB1-206ENST00000529210 ZNF157P51786 506 aaPredicted RBP15.03■□□□□ -0
COPB1-206ENST00000529210 MAP3K11Q16584 847 aa15.03■□□□□ -0
COPB1-206ENST00000529210 ZKSCAN2Q63HK3 967 aa15.03■□□□□ -0
COPB1-206ENST00000529210 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
COPB1-206ENST00000529210 PRMT6Q96LA8 375 aaPredicted RBP15.03■□□□□ -0
COPB1-206ENST00000529210 DEFB129Q9H1M3 183 aa15.03■□□□□ -0
COPB1-206ENST00000529210 MYH13Q9UKX3 1938 aa15.03■□□□□ -0
COPB1-206ENST00000529210 UNCXA6NJT0 531 aa15.02■□□□□ -0
COPB1-206ENST00000529210 SLC5A1P13866 664 aa15.02■□□□□ -0
COPB1-206ENST00000529210 BCAMP50895 628 aa15.02■□□□□ -0
COPB1-206ENST00000529210 LBX1P52954 281 aa15.02■□□□□ -0
COPB1-206ENST00000529210 GRM1Q13255 1194 aa15.02■□□□□ -0
COPB1-206ENST00000529210 RASAL3Q86YV0 1011 aa15.02■□□□□ -0
COPB1-206ENST00000529210 TNS4Q8IZW8 715 aa15.02■□□□□ -0
COPB1-206ENST00000529210 CEP126Q9P2H0 1117 aa15.02■□□□□ -0
COPB1-206ENST00000529210 TTF2Q9UNY4 1162 aaKnown RBP15.02■□□□□ -0
COPB1-206ENST00000529210 JAG2Q9Y219 1238 aa15.02■□□□□ -0
COPB1-206ENST00000529210 F8W031 263 aaPredicted RBP15.01□□□□□ -0.01
COPB1-206ENST00000529210 SPDYE2Q495Y8 402 aa15.01□□□□□ -0.01
COPB1-206ENST00000529210 ZIC5Q96T25 663 aa15.01□□□□□ -0.01
COPB1-206ENST00000529210 SAGE1Q9NXZ1 904 aa15.01□□□□□ -0.01
COPB1-206ENST00000529210 SCAF8Q9UPN6 1271 aaKnown RBP15.01□□□□□ -0.01
COPB1-206ENST00000529210 PCDHAC2Q9Y5I4 1007 aa15.01□□□□□ -0.01
COPB1-206ENST00000529210 LAMB1P07942 1786 aa15.01□□□□□ -0.01
COPB1-206ENST00000529210 SSC5DA1L4H1 1573 aa15□□□□□ -0.01
COPB1-206ENST00000529210 GNAI2P04899 355 aa15□□□□□ -0.01
COPB1-206ENST00000529210 TNFAIP1Q13829 316 aa15□□□□□ -0.01
COPB1-206ENST00000529210 ATP2B3Q16720 1220 aa15□□□□□ -0.01
COPB1-206ENST00000529210 LDLRAD1Q5T700 205 aa15□□□□□ -0.01
COPB1-206ENST00000529210 PRAMEF18Q5VWM3 479 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms