RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 TTLL5Q6EMB2 1281 aa15.89■□□□□ 0.13
SCN3B-205ENST00000528267 TRPM4Q8TD43 1214 aa15.89■□□□□ 0.13
SCN3B-205ENST00000528267 FBXW7Q969H0 707 aa15.89■□□□□ 0.13
SCN3B-205ENST00000528267 NEUROD6Q96NK8 337 aa15.89■□□□□ 0.13
SCN3B-205ENST00000528267 TAF1DQ9H5J8 278 aaPredicted RBP15.89■□□□□ 0.13
SCN3B-205ENST00000528267 AKAP2Q9Y2D5 859 aa15.89■□□□□ 0.13
SCN3B-205ENST00000528267 HIRAP54198 1017 aaPredicted RBP15.88■□□□□ 0.13
SCN3B-205ENST00000528267 HDAC1Q13547 482 aaPredicted RBP15.88■□□□□ 0.13
SCN3B-205ENST00000528267 CAVIN4Q5BKX8 364 aa15.88■□□□□ 0.13
SCN3B-205ENST00000528267 PI16Q6UXB8 463 aa15.88■□□□□ 0.13
SCN3B-205ENST00000528267 MICALL2Q8IY33 904 aa15.88■□□□□ 0.13
SCN3B-205ENST00000528267 VEGFAP15692 232 aaPredicted RBP15.87■□□□□ 0.13
SCN3B-205ENST00000528267 EPHX2P34913 555 aa15.87■□□□□ 0.13
SCN3B-205ENST00000528267 CHAF1AQ13111 956 aaPredicted RBP15.87■□□□□ 0.13
SCN3B-205ENST00000528267 RASGRF1Q13972 1273 aa15.87■□□□□ 0.13
SCN3B-205ENST00000528267 DPF2Q92785 391 aa15.87■□□□□ 0.13
SCN3B-205ENST00000528267 KIF1BPQ96EK5 621 aa15.87■□□□□ 0.13
SCN3B-205ENST00000528267 CNOT7Q9UIV1 285 aaKnown RBP15.87■□□□□ 0.13
SCN3B-205ENST00000528267 HACL1Q9UJ83 578 aa15.87■□□□□ 0.13
SCN3B-205ENST00000528267 PCDHAC2Q9Y5I4 1007 aa15.87■□□□□ 0.13
SCN3B-205ENST00000528267 ECM29Q5VYK3 1845 aa15.87■□□□□ 0.13
SCN3B-205ENST00000528267 ZBTB22O15209 634 aa15.86■□□□□ 0.13
SCN3B-205ENST00000528267 RAB11FIP3O75154 756 aa15.86■□□□□ 0.13
SCN3B-205ENST00000528267 ARID4AP29374 1257 aaPredicted RBP15.86■□□□□ 0.13
SCN3B-205ENST00000528267 HSP90AB4PQ58FF6 505 aa15.86■□□□□ 0.13
SCN3B-205ENST00000528267 SAMD7Q7Z3H4 446 aa15.86■□□□□ 0.13
SCN3B-205ENST00000528267 AACSQ86V21 672 aa15.86■□□□□ 0.13
SCN3B-205ENST00000528267 VPS37DQ86XT2 251 aa15.86■□□□□ 0.13
SCN3B-205ENST00000528267 ERC1Q8IUD2 1116 aa15.86■□□□□ 0.13
SCN3B-205ENST00000528267 AGBL3Q8NEM8 1001 aa15.86■□□□□ 0.13
SCN3B-205ENST00000528267 DOCK2Q92608 1830 aa15.86■□□□□ 0.13
SCN3B-205ENST00000528267 ASTN2O75129 1339 aaPredicted RBP15.86■□□□□ 0.13
SCN3B-205ENST00000528267 AOX1Q06278 1338 aa15.86■□□□□ 0.13
SCN3B-205ENST00000528267 POLR2AP24928 1970 aaKnown RBP15.86■□□□□ 0.13
SCN3B-205ENST00000528267 RPS12P25398 132 aaKnown RBP15.85■□□□□ 0.13
SCN3B-205ENST00000528267 MCAMP43121 646 aa15.85■□□□□ 0.13
SCN3B-205ENST00000528267 ZNF280AP59817 542 aaPredicted RBP15.85■□□□□ 0.13
SCN3B-205ENST00000528267 KIAA0825Q8IV33 1275 aa15.85■□□□□ 0.13
SCN3B-205ENST00000528267 IQCA1LA6NCM1 817 aa15.84■□□□□ 0.13
SCN3B-205ENST00000528267 FKBP1AP62942 108 aaKnown RBP15.84■□□□□ 0.13
SCN3B-205ENST00000528267 AAMPQ13685 434 aa15.84■□□□□ 0.13
SCN3B-205ENST00000528267 MFSD14BQ5SR56 506 aa15.84■□□□□ 0.13
SCN3B-205ENST00000528267 LRRCC1Q9C099 1032 aa15.84■□□□□ 0.13
SCN3B-205ENST00000528267 HMG20BQ9P0W2 317 aa15.84■□□□□ 0.13
SCN3B-205ENST00000528267 NDUFB9Q9Y6M9 179 aa15.84■□□□□ 0.13
SCN3B-205ENST00000528267 MAST2Q6P0Q8 1798 aa15.84■□□□□ 0.13
SCN3B-205ENST00000528267 F8W031 263 aaPredicted RBP15.83■□□□□ 0.12
SCN3B-205ENST00000528267 LMOD1P29536 600 aaPredicted RBP15.83■□□□□ 0.12
SCN3B-205ENST00000528267 TBC1D10BQ4KMP7 808 aaPredicted RBP15.83■□□□□ 0.12
SCN3B-205ENST00000528267 C16orf71Q8IYS4 520 aaPredicted RBP15.83■□□□□ 0.12
SCN3B-205ENST00000528267 OTUD7AQ8TE49 926 aaPredicted RBP15.83■□□□□ 0.12
SCN3B-205ENST00000528267 BCL11AQ9H165 835 aa15.83■□□□□ 0.12
SCN3B-205ENST00000528267 ADARB2Q9NS39 739 aaKnown RBP15.83■□□□□ 0.12
SCN3B-205ENST00000528267 USP17L8P0C7I0 530 aa15.82■□□□□ 0.12
SCN3B-205ENST00000528267 PRDX5P30044 214 aa15.82■□□□□ 0.12
SCN3B-205ENST00000528267 SMC5Q8IY18 1101 aa15.82■□□□□ 0.12
SCN3B-205ENST00000528267 CLASRPQ8N2M8 674 aaKnown RBP15.82■□□□□ 0.12
SCN3B-205ENST00000528267 ZNF384Q8TF68 577 aa15.82■□□□□ 0.12
SCN3B-205ENST00000528267 ZBED3Q96IU2 234 aaPredicted RBP15.82■□□□□ 0.12
SCN3B-205ENST00000528267 PDS5AQ29RF7 1337 aaKnown RBP15.82■□□□□ 0.12
SCN3B-205ENST00000528267 MYO3BQ8WXR4 1341 aa15.82■□□□□ 0.12
SCN3B-205ENST00000528267 SALL1Q9NSC2 1324 aa15.82■□□□□ 0.12
SCN3B-205ENST00000528267 MYH2Q9UKX2 1941 aa15.82■□□□□ 0.12
SCN3B-205ENST00000528267 SEMA3EO15041 775 aa15.81■□□□□ 0.12
SCN3B-205ENST00000528267 KIF4BQ2VIQ3 1234 aa15.81■□□□□ 0.12
SCN3B-205ENST00000528267 EAPPQ56P03 285 aaPredicted RBP15.81■□□□□ 0.12
SCN3B-205ENST00000528267 RBM26Q5T8P6 1007 aaKnown RBP15.81■□□□□ 0.12
SCN3B-205ENST00000528267 ZNF512BQ96KM6 892 aaPredicted RBP15.81■□□□□ 0.12
SCN3B-205ENST00000528267 SALL3Q9BXA9 1300 aa15.81■□□□□ 0.12
SCN3B-205ENST00000528267 MYOZ2Q9NPC6 264 aa15.81■□□□□ 0.12
SCN3B-205ENST00000528267 SNRKQ9NRH2 765 aa15.81■□□□□ 0.12
SCN3B-205ENST00000528267 DENND2AQ9ULE3 1009 aa15.81■□□□□ 0.12
SCN3B-205ENST00000528267 FRAT2O75474 233 aaPredicted RBP15.8■□□□□ 0.12
SCN3B-205ENST00000528267 TOMM70O94826 608 aa15.8■□□□□ 0.12
SCN3B-205ENST00000528267 TTC39AQ5SRH9 613 aa15.8■□□□□ 0.12
SCN3B-205ENST00000528267 GORABQ5T7V8 394 aa15.8■□□□□ 0.12
SCN3B-205ENST00000528267 TSHZ3Q63HK5 1081 aa15.8■□□□□ 0.12
SCN3B-205ENST00000528267 TBC1D9Q6ZT07 1266 aa15.8■□□□□ 0.12
SCN3B-205ENST00000528267 USP50Q70EL3 339 aaPredicted RBP15.8■□□□□ 0.12
SCN3B-205ENST00000528267 SPATA5Q8NB90 893 aa15.8■□□□□ 0.12
SCN3B-205ENST00000528267 GNL3LQ9NVN8 582 aaKnown RBP15.8■□□□□ 0.12
SCN3B-205ENST00000528267 H7C1D1 291 aa15.79■□□□□ 0.12
SCN3B-205ENST00000528267 CYP2E1P05181 493 aaPredicted RBP15.79■□□□□ 0.12
SCN3B-205ENST00000528267 ZAP70P43403 619 aa15.79■□□□□ 0.12
SCN3B-205ENST00000528267 FMR1Q06787 632 aaKnown RBP eCLIP15.79■□□□□ 0.12
SCN3B-205ENST00000528267 NBPF9Q3BBW0 867 aa15.79■□□□□ 0.12
SCN3B-205ENST00000528267 DLK2Q6UY11 383 aa15.79■□□□□ 0.12
SCN3B-205ENST00000528267 WDR66Q8TBY9 1149 aa15.79■□□□□ 0.12
SCN3B-205ENST00000528267 TTF2Q9UNY4 1162 aaKnown RBP15.79■□□□□ 0.12
SCN3B-205ENST00000528267 SCAF8Q9UPN6 1271 aaKnown RBP15.79■□□□□ 0.12
SCN3B-205ENST00000528267 WNT10BO00744 389 aa15.78■□□□□ 0.12
SCN3B-205ENST00000528267 IFIT2P09913 472 aaKnown RBP15.78■□□□□ 0.12
SCN3B-205ENST00000528267 UQCRFS1P1P0C7P4 283 aa15.78■□□□□ 0.12
SCN3B-205ENST00000528267 DIXDC1Q155Q3 683 aa15.78■□□□□ 0.12
SCN3B-205ENST00000528267 CCDC158Q5M9N0 1113 aa15.78■□□□□ 0.12
SCN3B-205ENST00000528267 MAP1SQ66K74 1059 aaPredicted RBP15.78■□□□□ 0.12
SCN3B-205ENST00000528267 LDHDQ86WU2 507 aa15.78■□□□□ 0.12
SCN3B-205ENST00000528267 RBM46Q8TBY0 533 aaKnown RBP15.78■□□□□ 0.12
SCN3B-205ENST00000528267 TBC1D22AQ8WUA7 517 aa15.78■□□□□ 0.12
SCN3B-205ENST00000528267 GCC1Q96CN9 775 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms