RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 CERS5Q8N5B7 392 aa19.4■□□□□ 0.7
CAPN1-213ENST00000527897 FAM84BQ96KN1 310 aaPredicted RBP19.4■□□□□ 0.7
CAPN1-213ENST00000527897 EYA2O00167 538 aa19.39■□□□□ 0.69
CAPN1-213ENST00000527897 WNT10BO00744 389 aa19.39■□□□□ 0.69
CAPN1-213ENST00000527897 GNAI3P08754 354 aa19.39■□□□□ 0.69
CAPN1-213ENST00000527897 RFX5P48382 616 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-213ENST00000527897 HUNKP57058 714 aa19.39■□□□□ 0.69
CAPN1-213ENST00000527897 PTPN12Q05209 780 aaKnown RBP19.39■□□□□ 0.69
CAPN1-213ENST00000527897 CHAF1AQ13111 956 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-213ENST00000527897 CAVIN4Q5BKX8 364 aa19.39■□□□□ 0.69
CAPN1-213ENST00000527897 C2orf69Q8N8R5 385 aa19.39■□□□□ 0.69
CAPN1-213ENST00000527897 AIDAQ96BJ3 306 aa19.39■□□□□ 0.69
CAPN1-213ENST00000527897 CDCA5Q96FF9 252 aa19.39■□□□□ 0.69
CAPN1-213ENST00000527897 GBA2Q9HCG7 927 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-213ENST00000527897 ZKSCAN2Q63HK3 967 aa19.38■□□□□ 0.69
CAPN1-213ENST00000527897 VGLL2Q8N8G2 317 aa19.38■□□□□ 0.69
CAPN1-213ENST00000527897 PITPNM2Q9BZ72 1349 aa19.37■□□□□ 0.69
CAPN1-213ENST00000527897 AOC2O75106 756 aa19.37■□□□□ 0.69
CAPN1-213ENST00000527897 IFIT1P09914 478 aaKnown RBP19.37■□□□□ 0.69
CAPN1-213ENST00000527897 RBM5P52756 815 aaKnown RBP eCLIP19.37■□□□□ 0.69
CAPN1-213ENST00000527897 PUM3Q15397 648 aaKnown RBP19.37■□□□□ 0.69
CAPN1-213ENST00000527897 DLGAP5Q15398 846 aa19.37■□□□□ 0.69
CAPN1-213ENST00000527897 PRAMEF18Q5VWM3 479 aa19.37■□□□□ 0.69
CAPN1-213ENST00000527897 TDRD7Q8NHU6 1098 aaKnown RBP19.37■□□□□ 0.69
CAPN1-213ENST00000527897 PA2G4Q9UQ80 394 aaKnown RBP19.37■□□□□ 0.69
CAPN1-213ENST00000527897 MFSD14BQ5SR56 506 aa19.36■□□□□ 0.69
CAPN1-213ENST00000527897 FAM205AQ6ZU69 1335 aa19.35■□□□□ 0.69
CAPN1-213ENST00000527897 FOXN1O15353 648 aa19.35■□□□□ 0.69
CAPN1-213ENST00000527897 SLC5A1P13866 664 aa19.35■□□□□ 0.69
CAPN1-213ENST00000527897 MMP14P50281 582 aa19.35■□□□□ 0.69
CAPN1-213ENST00000527897 BCAMP50895 628 aa19.35■□□□□ 0.69
CAPN1-213ENST00000527897 CFAP100Q494V2 611 aa19.35■□□□□ 0.69
CAPN1-213ENST00000527897 ATG9AQ7Z3C6 839 aa19.35■□□□□ 0.69
CAPN1-213ENST00000527897 FBXO33Q7Z6M2 555 aa19.35■□□□□ 0.69
CAPN1-213ENST00000527897 FTSJ3Q8IY81 847 aaKnown RBP19.35■□□□□ 0.69
CAPN1-213ENST00000527897 TMEM57Q8N5G2 664 aa19.35■□□□□ 0.69
CAPN1-213ENST00000527897 CEP126Q9P2H0 1117 aa19.35■□□□□ 0.69
CAPN1-213ENST00000527897 PCDHAC2Q9Y5I4 1007 aa19.35■□□□□ 0.69
CAPN1-213ENST00000527897 SRGAP3O43295 1099 aa19.34■□□□□ 0.69
CAPN1-213ENST00000527897 FKBP1AP62942 108 aaKnown RBP19.34■□□□□ 0.69
CAPN1-213ENST00000527897 COL13A1Q5TAT6 717 aaPredicted RBP19.34■□□□□ 0.69
CAPN1-213ENST00000527897 CLRN2A0PK11 232 aa19.33■□□□□ 0.68
CAPN1-213ENST00000527897 GNAI2P04899 355 aa19.33■□□□□ 0.68
CAPN1-213ENST00000527897 MAP2K1Q02750 393 aaPredicted RBP19.33■□□□□ 0.68
CAPN1-213ENST00000527897 TTLL12Q14166 644 aaPredicted RBP19.33■□□□□ 0.68
CAPN1-213ENST00000527897 HHIPL1Q96JK4 782 aa19.33■□□□□ 0.68
CAPN1-213ENST00000527897 BEGAINQ9BUH8 593 aa19.33■□□□□ 0.68
CAPN1-213ENST00000527897 WBP1LQ9NX94 342 aa19.33■□□□□ 0.68
CAPN1-213ENST00000527897 TTF2Q9UNY4 1162 aaKnown RBP19.33■□□□□ 0.68
CAPN1-213ENST00000527897 MYO1BO43795 1136 aa19.32■□□□□ 0.68
CAPN1-213ENST00000527897 CIAO1O76071 339 aa19.32■□□□□ 0.68
CAPN1-213ENST00000527897 FGFR2P21802 821 aa19.32■□□□□ 0.68
CAPN1-213ENST00000527897 ATP2B3Q16720 1220 aa19.32■□□□□ 0.68
CAPN1-213ENST00000527897 RGMBQ6NW40 437 aa19.32■□□□□ 0.68
CAPN1-213ENST00000527897 APOBEC3FQ8IUX4 373 aaKnown RBP19.32■□□□□ 0.68
CAPN1-213ENST00000527897 LPIN2Q92539 896 aa19.32■□□□□ 0.68
CAPN1-213ENST00000527897 VEZTQ9HBM0 779 aa19.32■□□□□ 0.68
CAPN1-213ENST00000527897 MYH13Q9UKX3 1938 aa19.31■□□□□ 0.68
CAPN1-213ENST00000527897 NF2P35240 595 aa19.31■□□□□ 0.68
CAPN1-213ENST00000527897 IL15P40933 162 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-213ENST00000527897 ZNF157P51786 506 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-213ENST00000527897 MOB2Q70IA6 237 aa19.31■□□□□ 0.68
CAPN1-213ENST00000527897 ITPRIPQ8IWB1 547 aa19.31■□□□□ 0.68
CAPN1-213ENST00000527897 ZBED3Q96IU2 234 aaPredicted RBP19.31■□□□□ 0.68
CAPN1-213ENST00000527897 FBXO3Q9UK99 471 aa19.31■□□□□ 0.68
CAPN1-213ENST00000527897 ARAP2Q8WZ64 1704 aa19.31■□□□□ 0.68
CAPN1-213ENST00000527897 ECM29Q5VYK3 1845 aa19.3■□□□□ 0.68
CAPN1-213ENST00000527897 SPDYE2BA6NHP3 402 aa19.3■□□□□ 0.68
CAPN1-213ENST00000527897 SPDYE6P0CI01 402 aa19.3■□□□□ 0.68
CAPN1-213ENST00000527897 PRKG1Q13976 671 aa19.3■□□□□ 0.68
CAPN1-213ENST00000527897 DZIP1LQ8IYY4 767 aaKnown RBP19.3■□□□□ 0.68
CAPN1-213ENST00000527897 PRMT6Q96LA8 375 aaPredicted RBP19.3■□□□□ 0.68
CAPN1-213ENST00000527897 COPRSQ9NQ92 184 aa19.3■□□□□ 0.68
CAPN1-213ENST00000527897 THSD7BQ9C0I4 1608 aa19.29■□□□□ 0.68
CAPN1-213ENST00000527897 MAP2K2P36507 400 aa19.29■□□□□ 0.68
CAPN1-213ENST00000527897 CTCFP49711 727 aaPredicted RBP19.29■□□□□ 0.68
CAPN1-213ENST00000527897 GRIK5Q16478 980 aa19.29■□□□□ 0.68
CAPN1-213ENST00000527897 MTMR14Q8NCE2 650 aa19.29■□□□□ 0.68
CAPN1-213ENST00000527897 TBC1D22AQ8WUA7 517 aa19.29■□□□□ 0.68
CAPN1-213ENST00000527897 PAPPA2Q9BXP8 1791 aa19.29■□□□□ 0.68
CAPN1-213ENST00000527897 AOX1Q06278 1338 aa19.28■□□□□ 0.68
CAPN1-213ENST00000527897 RLBP1P12271 317 aa19.28■□□□□ 0.68
CAPN1-213ENST00000527897 LBX1P52954 281 aa19.28■□□□□ 0.68
CAPN1-213ENST00000527897 NOGQ13253 232 aa19.28■□□□□ 0.68
CAPN1-213ENST00000527897 DEFB129Q9H1M3 183 aa19.28■□□□□ 0.68
CAPN1-213ENST00000527897 C1orf115Q9H7X2 142 aa19.28■□□□□ 0.68
CAPN1-213ENST00000527897 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-213ENST00000527897 UBE2Q2LH0YL09 131 aa19.27■□□□□ 0.68
CAPN1-213ENST00000527897 CRKP46108 304 aa19.27■□□□□ 0.68
CAPN1-213ENST00000527897 ZIC5Q96T25 663 aa19.27■□□□□ 0.68
CAPN1-213ENST00000527897 TSKSQ9UJT2 592 aa19.27■□□□□ 0.68
CAPN1-213ENST00000527897 SERPINA10Q9UK55 444 aa19.27■□□□□ 0.68
CAPN1-213ENST00000527897 PNMA6EA0A0J9YXQ4 647 aa19.26■□□□□ 0.67
CAPN1-213ENST00000527897 ADORA1P30542 326 aa19.26■□□□□ 0.67
CAPN1-213ENST00000527897 FKBP1BP68106 108 aa19.26■□□□□ 0.67
CAPN1-213ENST00000527897 TFCP2Q12800 502 aa19.26■□□□□ 0.67
CAPN1-213ENST00000527897 MTX1Q13505 466 aa19.26■□□□□ 0.67
CAPN1-213ENST00000527897 TNS4Q8IZW8 715 aa19.26■□□□□ 0.67
CAPN1-213ENST00000527897 CCDC102AQ96A19 550 aa19.26■□□□□ 0.67
CAPN1-213ENST00000527897 TDRD3Q9H7E2 651 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms