RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 SP3Q02447 781 aa15.79■□□□□ 0.12
SRPRA-202ENST00000527817 CRHR2Q13324 411 aa15.79■□□□□ 0.12
SRPRA-202ENST00000527817 CWF19L2Q2TBE0 894 aaKnown RBP15.79■□□□□ 0.12
SRPRA-202ENST00000527817 C15orf52Q6ZUT6 534 aaKnown RBP15.79■□□□□ 0.12
SRPRA-202ENST00000527817 CD99L2Q8TCZ2 262 aa15.79■□□□□ 0.12
SRPRA-202ENST00000527817 BRCA2P51587 3418 aa15.79■□□□□ 0.12
SRPRA-202ENST00000527817 MYO1BO43795 1136 aa15.78■□□□□ 0.12
SRPRA-202ENST00000527817 GJA5P36382 358 aa15.78■□□□□ 0.12
SRPRA-202ENST00000527817 KCNJ4P48050 445 aa15.78■□□□□ 0.12
SRPRA-202ENST00000527817 FKBP1AP62942 108 aaKnown RBP15.78■□□□□ 0.12
SRPRA-202ENST00000527817 CHRNDQ07001 517 aa15.78■□□□□ 0.12
SRPRA-202ENST00000527817 UBE3BQ7Z3V4 1068 aa15.78■□□□□ 0.12
SRPRA-202ENST00000527817 CERS5Q8N5B7 392 aa15.78■□□□□ 0.12
SRPRA-202ENST00000527817 TSPYL6Q8N831 410 aa15.78■□□□□ 0.12
SRPRA-202ENST00000527817 PTPN18Q99952 460 aa15.78■□□□□ 0.12
SRPRA-202ENST00000527817 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.78■□□□□ 0.12
SRPRA-202ENST00000527817 IRS2Q9Y4H2 1338 aa15.77■□□□□ 0.12
SRPRA-202ENST00000527817 SPDYE2BA6NHP3 402 aa15.77■□□□□ 0.12
SRPRA-202ENST00000527817 SPDYE6P0CI01 402 aa15.77■□□□□ 0.12
SRPRA-202ENST00000527817 FXR1P51114 621 aaKnown RBP eCLIP15.77■□□□□ 0.12
SRPRA-202ENST00000527817 CFAP100Q494V2 611 aa15.77■□□□□ 0.12
SRPRA-202ENST00000527817 NBPF12Q5TAG4 269 aaPredicted RBP15.77■□□□□ 0.12
SRPRA-202ENST00000527817 ANKRD13AQ8IZ07 590 aa15.77■□□□□ 0.12
SRPRA-202ENST00000527817 PRMT6Q96LA8 375 aaPredicted RBP15.77■□□□□ 0.12
SRPRA-202ENST00000527817 TMEM106CQ9BVX2 250 aa15.77■□□□□ 0.12
SRPRA-202ENST00000527817 PCDHAC2Q9Y5I4 1007 aa15.77■□□□□ 0.12
SRPRA-202ENST00000527817 SSC5DA1L4H1 1573 aa15.76■□□□□ 0.11
SRPRA-202ENST00000527817 IL1R1P14778 569 aa15.76■□□□□ 0.11
SRPRA-202ENST00000527817 CASP7P55210 303 aa15.76■□□□□ 0.11
SRPRA-202ENST00000527817 GCKRQ14397 625 aa15.76■□□□□ 0.11
SRPRA-202ENST00000527817 ARHGEF6Q15052 776 aa15.76■□□□□ 0.11
SRPRA-202ENST00000527817 STK31Q9BXU1 1019 aa15.76■□□□□ 0.11
SRPRA-202ENST00000527817 RBBP6Q7Z6E9 1792 aaKnown RBP15.76■□□□□ 0.11
SRPRA-202ENST00000527817 SPEF2Q9C093 1822 aa15.75■□□□□ 0.11
SRPRA-202ENST00000527817 CEP290O15078 2479 aa15.75■□□□□ 0.11
SRPRA-202ENST00000527817 LAMB1P07942 1786 aa15.75■□□□□ 0.11
SRPRA-202ENST00000527817 CLRN2A0PK11 232 aa15.75■□□□□ 0.11
SRPRA-202ENST00000527817 CAP1Q01518 475 aa15.75■□□□□ 0.11
SRPRA-202ENST00000527817 RASA3Q14644 834 aa15.75■□□□□ 0.11
SRPRA-202ENST00000527817 NBPF11Q86T75 865 aa15.75■□□□□ 0.11
SRPRA-202ENST00000527817 ZNF333Q96JL9 665 aa15.75■□□□□ 0.11
SRPRA-202ENST00000527817 MS4A4AQ96JQ5 239 aa15.75■□□□□ 0.11
SRPRA-202ENST00000527817 SNAP23O00161 211 aa15.74■□□□□ 0.11
SRPRA-202ENST00000527817 DDX10Q13206 875 aaKnown RBP15.74■□□□□ 0.11
SRPRA-202ENST00000527817 VEZTQ9HBM0 779 aa15.74■□□□□ 0.11
SRPRA-202ENST00000527817 ANKRD18BA2A2Z9 1011 aa15.73■□□□□ 0.11
SRPRA-202ENST00000527817 F8W031 263 aaPredicted RBP15.73■□□□□ 0.11
SRPRA-202ENST00000527817 TAF5LO75529 589 aa15.73■□□□□ 0.11
SRPRA-202ENST00000527817 SLC4A2P04920 1241 aa15.73■□□□□ 0.11
SRPRA-202ENST00000527817 G2E3Q7L622 706 aa15.73■□□□□ 0.11
SRPRA-202ENST00000527817 ZNF804AQ7Z570 1209 aa15.73■□□□□ 0.11
SRPRA-202ENST00000527817 TNFAIP1Q13829 316 aa15.72■□□□□ 0.11
SRPRA-202ENST00000527817 HELBQ8NG08 1087 aaPredicted RBP15.72■□□□□ 0.11
SRPRA-202ENST00000527817 OPTNQ96CV9 577 aa15.72■□□□□ 0.11
SRPRA-202ENST00000527817 MYH16Q9H6N6 1097 aa15.72■□□□□ 0.11
SRPRA-202ENST00000527817 ZFYVE28Q9HCC9 887 aa15.72■□□□□ 0.11
SRPRA-202ENST00000527817 COLQQ9Y215 455 aaPredicted RBP15.72■□□□□ 0.11
SRPRA-202ENST00000527817 AOX1Q06278 1338 aa15.71■□□□□ 0.11
SRPRA-202ENST00000527817 ECM29Q5VYK3 1845 aa15.71■□□□□ 0.11
SRPRA-202ENST00000527817 GTF2A2P52657 109 aa15.71■□□□□ 0.11
SRPRA-202ENST00000527817 RBM5P52756 815 aaKnown RBP eCLIP15.71■□□□□ 0.11
SRPRA-202ENST00000527817 SLC9C1Q4G0N8 1177 aa15.71■□□□□ 0.11
SRPRA-202ENST00000527817 LINS1Q8NG48 757 aa15.71■□□□□ 0.11
SRPRA-202ENST00000527817 ELP3Q9H9T3 547 aa15.71■□□□□ 0.11
SRPRA-202ENST00000527817 TRIOBPQ9H2D6 2365 aa15.7■□□□□ 0.1
SRPRA-202ENST00000527817 IFIT5Q13325 482 aaKnown RBP15.7■□□□□ 0.1
SRPRA-202ENST00000527817 SLC4A8Q2Y0W8 1093 aa15.7■□□□□ 0.1
SRPRA-202ENST00000527817 SPDYE2Q495Y8 402 aa15.7■□□□□ 0.1
SRPRA-202ENST00000527817 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.7■□□□□ 0.1
SRPRA-202ENST00000527817 DNAAF4Q8WXU2 420 aa15.7■□□□□ 0.1
SRPRA-202ENST00000527817 BRI3BPQ8WY22 251 aa15.7■□□□□ 0.1
SRPRA-202ENST00000527817 ZNF70Q9UC06 446 aaPredicted RBP15.7■□□□□ 0.1
SRPRA-202ENST00000527817 PTCH2Q9Y6C5 1203 aa15.7■□□□□ 0.1
SRPRA-202ENST00000527817 FAM205AQ6ZU69 1335 aa15.69■□□□□ 0.1
SRPRA-202ENST00000527817 MAP3K9P80192 1104 aa15.69■□□□□ 0.1
SRPRA-202ENST00000527817 FOXO4P98177 505 aa15.69■□□□□ 0.1
SRPRA-202ENST00000527817 FLIIQ13045 1269 aa15.69■□□□□ 0.1
SRPRA-202ENST00000527817 TAF1CQ15572 869 aaPredicted RBP15.69■□□□□ 0.1
SRPRA-202ENST00000527817 TWISTNBQ3B726 338 aaPredicted RBP15.69■□□□□ 0.1
SRPRA-202ENST00000527817 TEPSINQ96N21 525 aa15.69■□□□□ 0.1
SRPRA-202ENST00000527817 SERPINA10Q9UK55 444 aa15.69■□□□□ 0.1
SRPRA-202ENST00000527817 CCL15-CCL14A0A0B4J2E2 113 aa15.68■□□□□ 0.1
SRPRA-202ENST00000527817 CCL15Q16663 113 aa15.68■□□□□ 0.1
SRPRA-202ENST00000527817 TDRD7Q8NHU6 1098 aaKnown RBP15.68■□□□□ 0.1
SRPRA-202ENST00000527817 TSR2Q969E8 191 aaKnown RBP15.68■□□□□ 0.1
SRPRA-202ENST00000527817 OTUD5Q96G74 571 aa15.68■□□□□ 0.1
SRPRA-202ENST00000527817 TDRD3Q9H7E2 651 aaKnown RBP15.68■□□□□ 0.1
SRPRA-202ENST00000527817 SZT2Q5T011 3432 aa15.68■□□□□ 0.1
SRPRA-202ENST00000527817 WDHD1O75717 1129 aaPredicted RBP15.67■□□□□ 0.1
SRPRA-202ENST00000527817 GNRH1P01148 92 aa15.67■□□□□ 0.1
SRPRA-202ENST00000527817 DZIP1LQ8IYY4 767 aaKnown RBP15.67■□□□□ 0.1
SRPRA-202ENST00000527817 FAM43AQ8N2R8 423 aa15.67■□□□□ 0.1
SRPRA-202ENST00000527817 CNKSR2Q8WXI2 1034 aa15.67■□□□□ 0.1
SRPRA-202ENST00000527817 PRKRIP1Q9H875 184 aaPredicted RBP15.67■□□□□ 0.1
SRPRA-202ENST00000527817 ZCCHC17Q9NP64 241 aaKnown RBP15.67■□□□□ 0.1
SRPRA-202ENST00000527817 JAG2Q9Y219 1238 aa15.67■□□□□ 0.1
SRPRA-202ENST00000527817 H0YGN5 161 aa15.66■□□□□ 0.1
SRPRA-202ENST00000527817 TLR2O60603 784 aa15.66■□□□□ 0.1
SRPRA-202ENST00000527817 FKBP5Q13451 457 aaPredicted RBP15.66■□□□□ 0.1
SRPRA-202ENST00000527817 VGLL4Q14135 290 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms