RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 MTIF2P46199 727 aaKnown RBP8.21□□□□□ -1.09
CTNND1-216ENST00000527467 VPS41P49754 854 aa8.21□□□□□ -1.09
CTNND1-216ENST00000527467 RIPK4P57078 832 aa8.21□□□□□ -1.09
CTNND1-216ENST00000527467 TUBB8Q3ZCM7 444 aa8.21□□□□□ -1.09
CTNND1-216ENST00000527467 SDCCAG8Q86SQ7 713 aaPredicted RBP8.21□□□□□ -1.09
CTNND1-216ENST00000527467 VPS52Q8N1B4 723 aa8.21□□□□□ -1.09
CTNND1-216ENST00000527467 RGS22Q8NE09 1264 aa8.21□□□□□ -1.09
CTNND1-216ENST00000527467 UBAC1Q9BSL1 405 aa8.21□□□□□ -1.09
CTNND1-216ENST00000527467 MKL2Q9ULH7 1088 aa8.21□□□□□ -1.09
CTNND1-216ENST00000527467 TTC21BQ7Z4L5 1316 aa8.21□□□□□ -1.09
CTNND1-216ENST00000527467 SBNO1A3KN83 1393 aa8.21□□□□□ -1.09
CTNND1-216ENST00000527467 PPIP5K1Q6PFW1 1433 aa8.21□□□□□ -1.09
CTNND1-216ENST00000527467 BCORL1Q5H9F3 1711 aa8.21□□□□□ -1.09
CTNND1-216ENST00000527467 ATP2A2P16615 1042 aaKnown RBP8.21□□□□□ -1.1
CTNND1-216ENST00000527467 ARHGAP25P42331 645 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 SNX16P57768 344 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 KRBA2Q6ZNG9 492 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 GOLGA1Q92805 767 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 PFDN4Q9NQP4 134 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 TXNDC9O14530 226 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 CCDC172P0C7W6 258 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 TNIP1Q15025 636 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 PPP1R42Q7Z4L9 355 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 CTCFLQ8NI51 663 aaPredicted RBP8.21□□□□□ -1.1
CTNND1-216ENST00000527467 HVCN1Q96D96 273 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 HOOK2Q96ED9 719 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 GNL3LQ9NVN8 582 aaKnown RBP8.21□□□□□ -1.1
CTNND1-216ENST00000527467 CAVIN2O95810 425 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 CALCOCO2Q13137 446 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 PSMD6Q15008 389 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 UVSSAQ2YD98 709 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 GKAP1Q5VSY0 366 aaPredicted RBP8.21□□□□□ -1.1
CTNND1-216ENST00000527467 RSPH3Q86UC2 560 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 L3MBTL2Q969R5 705 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 TRIM4Q9C037 500 aa8.21□□□□□ -1.1
CTNND1-216ENST00000527467 RNF216Q9NWF9 866 aaPredicted RBP8.21□□□□□ -1.1
CTNND1-216ENST00000527467 IQCA1LA6NCM1 817 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 SPECC1L-ADORA2AF8WAN1 911 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 GNPATO15228 680 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 RAB11FIP4Q86YS3 637 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 RNF10Q8N5U6 811 aaKnown RBP8.2□□□□□ -1.1
CTNND1-216ENST00000527467 MCUR1Q96AQ8 359 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 NKIRAS1Q9NYS0 192 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 AKR1B10O60218 316 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 CLCN1P35523 988 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 SLC4A8Q2Y0W8 1093 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 SPATA31A3Q5VYP0 1347 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 TTC16Q8NEE8 873 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 KCNK9Q9NPC2 374 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 CTNNA3Q9UI47 895 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 ADCY5O95622 1261 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 SYF2O95926 243 aaKnown RBP8.2□□□□□ -1.1
CTNND1-216ENST00000527467 FYB2Q5VWT5 728 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 UBA5Q9GZZ9 404 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 DDX19AQ9NUU7 478 aaKnown RBP8.2□□□□□ -1.1
CTNND1-216ENST00000527467 TXNDC16Q9P2K2 825 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 MAST1Q9Y2H9 1570 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 ABCC11Q96J66 1382 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 FAM160A1Q05DH4 1040 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 PANK1Q8TE04 598 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 CNKSR1Q969H4 720 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 RAB34Q9BZG1 259 aa8.2□□□□□ -1.1
CTNND1-216ENST00000527467 ERCC5P28715 1186 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-216ENST00000527467 CYLC1P35663 651 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-216ENST00000527467 TAF7Q15545 349 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-216ENST00000527467 NBPF6Q5VWK0 638 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 ZSCAN25Q6NSZ9 544 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 NBPF5PQ86XG9 351 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-216ENST00000527467 NBPF4Q96M43 638 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 TSPYL4Q9UJ04 414 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 BLMP54132 1417 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-216ENST00000527467 TTC39AQ5SRH9 613 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 ARHGEF2Q92974 986 aaKnown RBP8.19□□□□□ -1.1
CTNND1-216ENST00000527467 PRKRIP1Q9H875 184 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-216ENST00000527467 BCAP29Q9UHQ4 241 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 DIP2CQ9Y2E4 1556 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 YTHDC2Q9H6S0 1430 aaKnown RBP8.19□□□□□ -1.1
CTNND1-216ENST00000527467 IRX4P78413 519 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 PDCD2Q16342 344 aaPredicted RBP8.19□□□□□ -1.1
CTNND1-216ENST00000527467 STX1AQ16623 288 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 DALRD3Q5D0E6 543 aaKnown RBP8.19□□□□□ -1.1
CTNND1-216ENST00000527467 PANK3Q9H999 370 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 MTRF1LQ9UGC7 380 aaKnown RBP8.19□□□□□ -1.1
CTNND1-216ENST00000527467 NDUFAB1O14561 156 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 ATP5DP30049 168 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 ATICP31939 592 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 VAV2P52735 878 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 HSP90AA5PQ58FG0 334 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 PHLDB3Q6NSJ2 640 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 CCDC89Q8N998 374 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 CCT6BQ92526 530 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 JAKMIP2Q96AA8 810 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 CAPZA3Q96KX2 299 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 MTFR1LQ9H019 292 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 TPX2Q9ULW0 747 aaKnown RBP8.19□□□□□ -1.1
CTNND1-216ENST00000527467 AKAP2Q9Y2D5 859 aa8.19□□□□□ -1.1
CTNND1-216ENST00000527467 COL17A1Q9UMD9 1497 aaPredicted RBP8.18□□□□□ -1.1
CTNND1-216ENST00000527467 VIMP08670 466 aaKnown RBP8.18□□□□□ -1.1
CTNND1-216ENST00000527467 RLBP1P12271 317 aa8.18□□□□□ -1.1
CTNND1-216ENST00000527467 TPTE2Q6XPS3 522 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms