RNA–Protein interactions for RNA: ENST00000527413.1

SSSCA1-204, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2

Gene SSSCA1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-204ENST00000527413 COL1A1P02452 1464 aaPredicted RBP17.08■□□□□ 0.32
SSSCA1-204ENST00000527413 FAM155AB1AL88 458 aaPredicted RBP17.08■□□□□ 0.32
SSSCA1-204ENST00000527413 FKBP1BP68106 108 aa17.08■□□□□ 0.32
SSSCA1-204ENST00000527413 LRRC24Q50LG9 513 aa17.08■□□□□ 0.32
SSSCA1-204ENST00000527413 NOB1Q9ULX3 412 aaKnown RBP17.08■□□□□ 0.32
SSSCA1-204ENST00000527413 JAG2Q9Y219 1238 aa17.08■□□□□ 0.32
SSSCA1-204ENST00000527413 FAM205AQ6ZU69 1335 aa17.07■□□□□ 0.32
SSSCA1-204ENST00000527413 KIF16BQ96L93 1317 aa17.07■□□□□ 0.32
SSSCA1-204ENST00000527413 GYG1P46976 350 aa17.07■□□□□ 0.32
SSSCA1-204ENST00000527413 ZNF157P51786 506 aaPredicted RBP17.07■□□□□ 0.32
SSSCA1-204ENST00000527413 METTL24Q5JXM2 366 aa17.07■□□□□ 0.32
SSSCA1-204ENST00000527413 APOBEC3FQ8IUX4 373 aaKnown RBP17.07■□□□□ 0.32
SSSCA1-204ENST00000527413 TDRD7Q8NHU6 1098 aaKnown RBP17.07■□□□□ 0.32
SSSCA1-204ENST00000527413 KLHDC4Q8TBB5 520 aa17.07■□□□□ 0.32
SSSCA1-204ENST00000527413 CCDC102AQ96A19 550 aa17.07■□□□□ 0.32
SSSCA1-204ENST00000527413 ZIC5Q96T25 663 aa17.07■□□□□ 0.32
SSSCA1-204ENST00000527413 API5Q9BZZ5 524 aaKnown RBP17.07■□□□□ 0.32
SSSCA1-204ENST00000527413 CASP8AP2Q9UKL3 1982 aa17.06■□□□□ 0.32
SSSCA1-204ENST00000527413 F8W031 263 aaPredicted RBP17.06■□□□□ 0.32
SSSCA1-204ENST00000527413 CA12O43570 354 aa17.06■□□□□ 0.32
SSSCA1-204ENST00000527413 SLC10A3P09131 477 aa17.06■□□□□ 0.32
SSSCA1-204ENST00000527413 HIBADHP31937 336 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-204ENST00000527413 RARSP54136 660 aaKnown RBP17.06■□□□□ 0.32
SSSCA1-204ENST00000527413 DLGAP5Q15398 846 aa17.06■□□□□ 0.32
SSSCA1-204ENST00000527413 PRAMEF18Q5VWM3 479 aa17.06■□□□□ 0.32
SSSCA1-204ENST00000527413 VGLL2Q8N8G2 317 aa17.06■□□□□ 0.32
SSSCA1-204ENST00000527413 MTMR14Q8NCE2 650 aa17.06■□□□□ 0.32
SSSCA1-204ENST00000527413 FAM84BQ96KN1 310 aaPredicted RBP17.06■□□□□ 0.32
SSSCA1-204ENST00000527413 TSKSQ9UJT2 592 aa17.06■□□□□ 0.32
SSSCA1-204ENST00000527413 CAPN15O75808 1086 aa17.05■□□□□ 0.32
SSSCA1-204ENST00000527413 PDE8BO95263 885 aa17.05■□□□□ 0.32
SSSCA1-204ENST00000527413 UBTFL1P0CB47 393 aaPredicted RBP17.05■□□□□ 0.32
SSSCA1-204ENST00000527413 NF2P35240 595 aa17.04■□□□□ 0.32
SSSCA1-204ENST00000527413 RFX5P48382 616 aaPredicted RBP17.04■□□□□ 0.32
SSSCA1-204ENST00000527413 CFAP100Q494V2 611 aa17.04■□□□□ 0.32
SSSCA1-204ENST00000527413 MFSD14BQ5SR56 506 aa17.04■□□□□ 0.32
SSSCA1-204ENST00000527413 MOB2Q70IA6 237 aa17.04■□□□□ 0.32
SSSCA1-204ENST00000527413 RASAL3Q86YV0 1011 aa17.04■□□□□ 0.32
SSSCA1-204ENST00000527413 PCDHAC2Q9Y5I4 1007 aa17.04■□□□□ 0.32
SSSCA1-204ENST00000527413 LAMB1P07942 1786 aa17.03■□□□□ 0.32
SSSCA1-204ENST00000527413 SPDYE2BA6NHP3 402 aa17.03■□□□□ 0.32
SSSCA1-204ENST00000527413 SPDYE6P0CI01 402 aa17.03■□□□□ 0.32
SSSCA1-204ENST00000527413 KIF23Q02241 960 aaPredicted RBP17.03■□□□□ 0.32
SSSCA1-204ENST00000527413 VPS37DQ86XT2 251 aa17.03■□□□□ 0.32
SSSCA1-204ENST00000527413 MIER1Q8N108 512 aa17.03■□□□□ 0.32
SSSCA1-204ENST00000527413 OTOFQ9HC10 1997 aa17.02■□□□□ 0.32
SSSCA1-204ENST00000527413 EYA2O00167 538 aa17.02■□□□□ 0.32
SSSCA1-204ENST00000527413 MYO1BO43795 1136 aa17.02■□□□□ 0.32
SSSCA1-204ENST00000527413 PTPN12Q05209 780 aaKnown RBP17.02■□□□□ 0.32
SSSCA1-204ENST00000527413 TTLL12Q14166 644 aaPredicted RBP17.02■□□□□ 0.32
SSSCA1-204ENST00000527413 PUM3Q15397 648 aaKnown RBP17.02■□□□□ 0.32
SSSCA1-204ENST00000527413 CAVIN4Q5BKX8 364 aa17.02■□□□□ 0.32
SSSCA1-204ENST00000527413 DIEXFQ68CQ4 756 aaKnown RBP17.02■□□□□ 0.32
SSSCA1-204ENST00000527413 FBXO33Q7Z6M2 555 aa17.02■□□□□ 0.32
SSSCA1-204ENST00000527413 IQSEC3Q9UPP2 1182 aaPredicted RBP17.02■□□□□ 0.32
SSSCA1-204ENST00000527413 SSC5DA1L4H1 1573 aa17.02■□□□□ 0.31
SSSCA1-204ENST00000527413 ARHGAP45Q92619 1136 aa17.01■□□□□ 0.31
SSSCA1-204ENST00000527413 TTF2Q9UNY4 1162 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-204ENST00000527413 LRRFIP2Q9Y608 721 aaKnown RBP17.01■□□□□ 0.31
SSSCA1-204ENST00000527413 AOX1Q06278 1338 aa17■□□□□ 0.31
SSSCA1-204ENST00000527413 CLRN2A0PK11 232 aa17■□□□□ 0.31
SSSCA1-204ENST00000527413 UBE2Q2LH0YL09 131 aa17■□□□□ 0.31
SSSCA1-204ENST00000527413 IFIT1P09914 478 aaKnown RBP17■□□□□ 0.31
SSSCA1-204ENST00000527413 FGFR2P21802 821 aa17■□□□□ 0.31
SSSCA1-204ENST00000527413 RBM5P52756 815 aaKnown RBP eCLIP17■□□□□ 0.31
SSSCA1-204ENST00000527413 INTS3Q68E01 1043 aaKnown RBP17■□□□□ 0.31
SSSCA1-204ENST00000527413 ATG9AQ7Z3C6 839 aa17■□□□□ 0.31
SSSCA1-204ENST00000527413 PRMT6Q96LA8 375 aaPredicted RBP17■□□□□ 0.31
SSSCA1-204ENST00000527413 MEIS3Q99687 375 aa17■□□□□ 0.31
SSSCA1-204ENST00000527413 DEFB129Q9H1M3 183 aa17■□□□□ 0.31
SSSCA1-204ENST00000527413 HDAC5Q9UQL6 1122 aa17■□□□□ 0.31
SSSCA1-204ENST00000527413 PPP2R3BQ9Y5P8 575 aa17■□□□□ 0.31
SSSCA1-204ENST00000527413 HNRNPUQ00839 825 aaKnown RBP eCLIP16.99■□□□□ 0.31
SSSCA1-204ENST00000527413 CHAF1AQ13111 956 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-204ENST00000527413 SIL1Q9H173 461 aa16.99■□□□□ 0.31
SSSCA1-204ENST00000527413 VEZTQ9HBM0 779 aa16.99■□□□□ 0.31
SSSCA1-204ENST00000527413 SAGE1Q9NXZ1 904 aa16.99■□□□□ 0.31
SSSCA1-204ENST00000527413 SERPINA10Q9UK55 444 aa16.99■□□□□ 0.31
SSSCA1-204ENST00000527413 FBXO3Q9UK99 471 aa16.99■□□□□ 0.31
SSSCA1-204ENST00000527413 FRAT2O75474 233 aaPredicted RBP16.98■□□□□ 0.31
SSSCA1-204ENST00000527413 CIAO1O76071 339 aa16.98■□□□□ 0.31
SSSCA1-204ENST00000527413 SLC5A1P13866 664 aa16.98■□□□□ 0.31
SSSCA1-204ENST00000527413 BCAMP50895 628 aa16.98■□□□□ 0.31
SSSCA1-204ENST00000527413 PRKG1Q13976 671 aa16.98■□□□□ 0.31
SSSCA1-204ENST00000527413 ARMC9Q7Z3E5 817 aa16.98■□□□□ 0.31
SSSCA1-204ENST00000527413 TBC1D22AQ8WUA7 517 aa16.98■□□□□ 0.31
SSSCA1-204ENST00000527413 CSRNP1Q96S65 589 aa16.98■□□□□ 0.31
SSSCA1-204ENST00000527413 IPO8O15397 1037 aaKnown RBP16.97■□□□□ 0.31
SSSCA1-204ENST00000527413 TRIM27P14373 513 aa16.97■□□□□ 0.31
SSSCA1-204ENST00000527413 CRKP46108 304 aa16.97■□□□□ 0.31
SSSCA1-204ENST00000527413 GRIK5Q16478 980 aa16.97■□□□□ 0.31
SSSCA1-204ENST00000527413 REM2Q8IYK8 340 aaPredicted RBP16.97■□□□□ 0.31
SSSCA1-204ENST00000527413 LPIN2Q92539 896 aa16.97■□□□□ 0.31
SSSCA1-204ENST00000527413 ANGEL1Q9UNK9 670 aaKnown RBP16.97■□□□□ 0.31
SSSCA1-204ENST00000527413 BCAR3O75815 825 aa16.96■□□□□ 0.31
SSSCA1-204ENST00000527413 GNAI3P08754 354 aa16.96■□□□□ 0.31
SSSCA1-204ENST00000527413 SPDYE2Q495Y8 402 aa16.96■□□□□ 0.31
SSSCA1-204ENST00000527413 DZIP1LQ8IYY4 767 aaKnown RBP16.96■□□□□ 0.31
SSSCA1-204ENST00000527413 FRAT1Q92837 279 aaPredicted RBP16.96■□□□□ 0.31
SSSCA1-204ENST00000527413 RNF186Q9NXI6 227 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms