RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 FOXN1O15353 648 aa13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 GRM1Q13255 1194 aa13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 MEIS3Q99687 375 aa13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 WBP1LQ9NX94 342 aa13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 TNNQ9UQP3 1299 aa13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 JAG2Q9Y219 1238 aa13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 LRRFIP2Q9Y608 721 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-204ENST00000524797 IPO8O15397 1037 aaKnown RBP13.97□□□□□ -0.17
TRAPPC4-204ENST00000524797 PDE8BO95263 885 aa13.97□□□□□ -0.17
TRAPPC4-204ENST00000524797 HUNKP57058 714 aa13.97□□□□□ -0.17
TRAPPC4-204ENST00000524797 PTPN12Q05209 780 aaKnown RBP13.97□□□□□ -0.17
TRAPPC4-204ENST00000524797 C2orf69Q8N8R5 385 aa13.97□□□□□ -0.17
TRAPPC4-204ENST00000524797 AIDAQ96BJ3 306 aa13.97□□□□□ -0.17
TRAPPC4-204ENST00000524797 HDAC5Q9UQL6 1122 aa13.97□□□□□ -0.17
TRAPPC4-204ENST00000524797 AOC2O75106 756 aa13.96□□□□□ -0.17
TRAPPC4-204ENST00000524797 COL13A1Q5TAT6 717 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-204ENST00000524797 FBXO33Q7Z6M2 555 aa13.96□□□□□ -0.17
TRAPPC4-204ENST00000524797 SCAF8Q9UPN6 1271 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-204ENST00000524797 ZBED9Q6R2W3 1325 aa13.96□□□□□ -0.18
TRAPPC4-204ENST00000524797 TRIM27P14373 513 aa13.96□□□□□ -0.18
TRAPPC4-204ENST00000524797 ATF7IPQ6VMQ6 1270 aa13.96□□□□□ -0.18
TRAPPC4-204ENST00000524797 MTMR14Q8NCE2 650 aa13.96□□□□□ -0.18
TRAPPC4-204ENST00000524797 F8W031 263 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-204ENST00000524797 FGFR2P21802 821 aa13.95□□□□□ -0.18
TRAPPC4-204ENST00000524797 MAP2K2P36507 400 aa13.95□□□□□ -0.18
TRAPPC4-204ENST00000524797 MAP2K1Q02750 393 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-204ENST00000524797 DLGAP5Q15398 846 aa13.95□□□□□ -0.18
TRAPPC4-204ENST00000524797 ATG9AQ7Z3C6 839 aa13.95□□□□□ -0.18
TRAPPC4-204ENST00000524797 FRAT1Q92837 279 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-204ENST00000524797 GNAI3P08754 354 aa13.94□□□□□ -0.18
TRAPPC4-204ENST00000524797 CTCFP49711 727 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC4-204ENST00000524797 PUM3Q15397 648 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-204ENST00000524797 IFFO2Q5TF58 517 aa13.94□□□□□ -0.18
TRAPPC4-204ENST00000524797 RGMBQ6NW40 437 aa13.94□□□□□ -0.18
TRAPPC4-204ENST00000524797 APOBEC3FQ8IUX4 373 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-204ENST00000524797 FBXO3Q9UK99 471 aa13.94□□□□□ -0.18
TRAPPC4-204ENST00000524797 PCDHAC2Q9Y5I4 1007 aa13.94□□□□□ -0.18
TRAPPC4-204ENST00000524797 CIAO1O76071 339 aa13.94□□□□□ -0.18
TRAPPC4-204ENST00000524797 CFAP100Q494V2 611 aa13.94□□□□□ -0.18
TRAPPC4-204ENST00000524797 CAVIN4Q5BKX8 364 aa13.94□□□□□ -0.18
TRAPPC4-204ENST00000524797 COL1A1P02452 1464 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC4-204ENST00000524797 IFIT1P09914 478 aaKnown RBP13.93□□□□□ -0.18
TRAPPC4-204ENST00000524797 HSPA8P11142 646 aaKnown RBP13.93□□□□□ -0.18
TRAPPC4-204ENST00000524797 MFSD14BQ5SR56 506 aa13.93□□□□□ -0.18
TRAPPC4-204ENST00000524797 PRAMEF18Q5VWM3 479 aa13.93□□□□□ -0.18
TRAPPC4-204ENST00000524797 ZKSCAN2Q63HK3 967 aa13.93□□□□□ -0.18
TRAPPC4-204ENST00000524797 VPS37DQ86XT2 251 aa13.93□□□□□ -0.18
TRAPPC4-204ENST00000524797 SIL1Q9H173 461 aa13.93□□□□□ -0.18
TRAPPC4-204ENST00000524797 IQSEC3Q9UPP2 1182 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC4-204ENST00000524797 AKAP11Q9UKA4 1901 aa13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 FAM155AB1AL88 458 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 SLC5A1P13866 664 aa13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 BCAMP50895 628 aa13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 FKBP1BP68106 108 aa13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 CHAF1AQ13111 956 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 POTEDQ86YR6 584 aa13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 CLUAP1Q96AJ1 413 aa13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 COPRSQ9NQ92 184 aa13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 PA2G4Q9UQ80 394 aaKnown RBP13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 SPDYE2BA6NHP3 402 aa13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 SPDYE6P0CI01 402 aa13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 LPIN2Q92539 896 aa13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 PRDM10Q9NQV6 1147 aa13.92□□□□□ -0.18
TRAPPC4-204ENST00000524797 AOX1Q06278 1338 aa13.91□□□□□ -0.18
TRAPPC4-204ENST00000524797 IL15P40933 162 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC4-204ENST00000524797 ZNF157P51786 506 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC4-204ENST00000524797 NOGQ13253 232 aa13.91□□□□□ -0.18
TRAPPC4-204ENST00000524797 TMEM57Q8N5G2 664 aa13.91□□□□□ -0.18
TRAPPC4-204ENST00000524797 CCDC102AQ96A19 550 aa13.91□□□□□ -0.18
TRAPPC4-204ENST00000524797 PRMT6Q96LA8 375 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC4-204ENST00000524797 ZIC5Q96T25 663 aa13.91□□□□□ -0.18
TRAPPC4-204ENST00000524797 TTF2Q9UNY4 1162 aaKnown RBP13.91□□□□□ -0.18
TRAPPC4-204ENST00000524797 SLC10A3P09131 477 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 LBX1P52954 281 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 MTX1Q13505 466 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 GRIK5Q16478 980 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 ATP2B3Q16720 1220 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 MOB2Q70IA6 237 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 CEP126Q9P2H0 1117 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 CLRN2A0PK11 232 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 FRAT2O75474 233 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 GNAI2P04899 355 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 NF2P35240 595 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 RBM5P52756 815 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 RASAL3Q86YV0 1011 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 TNS4Q8IZW8 715 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 TBC1D22AQ8WUA7 517 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 BEGAINQ9BUH8 593 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 SERPINA10Q9UK55 444 aa13.9□□□□□ -0.18
TRAPPC4-204ENST00000524797 UBE2Q2LH0YL09 131 aa13.89□□□□□ -0.19
TRAPPC4-204ENST00000524797 SRGAP3O43295 1099 aa13.89□□□□□ -0.19
TRAPPC4-204ENST00000524797 MYO1BO43795 1136 aa13.89□□□□□ -0.19
TRAPPC4-204ENST00000524797 CRKP46108 304 aa13.88□□□□□ -0.19
TRAPPC4-204ENST00000524797 TTLL12Q14166 644 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC4-204ENST00000524797 DEFB129Q9H1M3 183 aa13.88□□□□□ -0.19
TRAPPC4-204ENST00000524797 PPP2R3BQ9Y5P8 575 aa13.88□□□□□ -0.19
TRAPPC4-204ENST00000524797 SSC5DA1L4H1 1573 aa13.88□□□□□ -0.19
TRAPPC4-204ENST00000524797 KIF23Q02241 960 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC4-204ENST00000524797 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
TRAPPC4-204ENST00000524797 VEZTQ9HBM0 779 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms