RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 UTYO14607 1347 aa12.21□□□□□ -0.45
CNKSR1-209ENST00000524529 NBPF7P0C2Y1 421 aaPredicted RBP12.21□□□□□ -0.45
CNKSR1-209ENST00000524529 MRPL50Q8N5N7 158 aaKnown RBP12.21□□□□□ -0.45
CNKSR1-209ENST00000524529 SAGE1Q9NXZ1 904 aa12.21□□□□□ -0.45
CNKSR1-209ENST00000524529 SSC5DA1L4H1 1573 aa12.21□□□□□ -0.46
CNKSR1-209ENST00000524529 LAMB1P07942 1786 aa12.2□□□□□ -0.46
CNKSR1-209ENST00000524529 CCDC85CA6NKD9 419 aa12.2□□□□□ -0.46
CNKSR1-209ENST00000524529 PLIN1O60240 522 aa12.2□□□□□ -0.46
CNKSR1-209ENST00000524529 HNRNPUQ00839 825 aaKnown RBP eCLIP12.2□□□□□ -0.46
CNKSR1-209ENST00000524529 DGKZQ13574 1117 aa12.2□□□□□ -0.46
CNKSR1-209ENST00000524529 CCDC57Q2TAC2 916 aa12.2□□□□□ -0.46
CNKSR1-209ENST00000524529 LDHAL6AQ6ZMR3 332 aa12.2□□□□□ -0.46
CNKSR1-209ENST00000524529 CDCA7LQ96GN5 454 aa12.2□□□□□ -0.46
CNKSR1-209ENST00000524529 SRCIN1Q9C0H9 1055 aa12.2□□□□□ -0.46
CNKSR1-209ENST00000524529 C9orf78Q9NZ63 289 aaPredicted RBP12.2□□□□□ -0.46
CNKSR1-209ENST00000524529 HDAC9Q9UKV0 1011 aa12.2□□□□□ -0.46
CNKSR1-209ENST00000524529 F8W031 263 aaPredicted RBP12.19□□□□□ -0.46
CNKSR1-209ENST00000524529 MMP14P50281 582 aa12.19□□□□□ -0.46
CNKSR1-209ENST00000524529 PTPN12Q05209 780 aaKnown RBP12.19□□□□□ -0.46
CNKSR1-209ENST00000524529 SLFN5Q08AF3 891 aa12.19□□□□□ -0.46
CNKSR1-209ENST00000524529 PRKG1Q13976 671 aa12.19□□□□□ -0.46
CNKSR1-209ENST00000524529 ANKRD44Q8N8A2 993 aa12.19□□□□□ -0.46
CNKSR1-209ENST00000524529 MTMR14Q8NCE2 650 aa12.19□□□□□ -0.46
CNKSR1-209ENST00000524529 PRMT6Q96LA8 375 aaPredicted RBP12.19□□□□□ -0.46
CNKSR1-209ENST00000524529 BICC1Q9H694 974 aaKnown RBP12.19□□□□□ -0.46
CNKSR1-209ENST00000524529 CNNM1Q9NRU3 951 aa12.19□□□□□ -0.46
CNKSR1-209ENST00000524529 PCDH10Q9P2E7 1040 aa12.19□□□□□ -0.46
CNKSR1-209ENST00000524529 RIPOR2Q9Y4F9 1068 aa12.19□□□□□ -0.46
CNKSR1-209ENST00000524529 OTOFQ9HC10 1997 aa12.19□□□□□ -0.46
CNKSR1-209ENST00000524529 E9PSI1 815 aa12.18□□□□□ -0.46
CNKSR1-209ENST00000524529 GYG1P46976 350 aa12.18□□□□□ -0.46
CNKSR1-209ENST00000524529 FKBP1AP62942 108 aaKnown RBP12.18□□□□□ -0.46
CNKSR1-209ENST00000524529 MKRN3Q13064 507 aaKnown RBP12.18□□□□□ -0.46
CNKSR1-209ENST00000524529 RABL6Q3YEC7 729 aaPredicted RBP12.18□□□□□ -0.46
CNKSR1-209ENST00000524529 CFAP100Q494V2 611 aa12.18□□□□□ -0.46
CNKSR1-209ENST00000524529 LDLRAD1Q5T700 205 aa12.18□□□□□ -0.46
CNKSR1-209ENST00000524529 ZNF804AQ7Z570 1209 aa12.18□□□□□ -0.46
CNKSR1-209ENST00000524529 APOBEC3FQ8IUX4 373 aaKnown RBP12.18□□□□□ -0.46
CNKSR1-209ENST00000524529 TDRD7Q8NHU6 1098 aaKnown RBP12.18□□□□□ -0.46
CNKSR1-209ENST00000524529 SSH1Q8WYL5 1049 aa12.18□□□□□ -0.46
CNKSR1-209ENST00000524529 FAM84BQ96KN1 310 aaPredicted RBP12.18□□□□□ -0.46
CNKSR1-209ENST00000524529 FAM205AQ6ZU69 1335 aa12.17□□□□□ -0.46
CNKSR1-209ENST00000524529 COL1A1P02452 1464 aaPredicted RBP12.17□□□□□ -0.46
CNKSR1-209ENST00000524529 CLRN2A0PK11 232 aa12.17□□□□□ -0.46
CNKSR1-209ENST00000524529 SPDYE2BA6NHP3 402 aa12.17□□□□□ -0.46
CNKSR1-209ENST00000524529 SPDYE6P0CI01 402 aa12.17□□□□□ -0.46
CNKSR1-209ENST00000524529 UBE4AQ14139 1066 aa12.17□□□□□ -0.46
CNKSR1-209ENST00000524529 TTLL12Q14166 644 aaPredicted RBP12.17□□□□□ -0.46
CNKSR1-209ENST00000524529 DLGAP5Q15398 846 aa12.17□□□□□ -0.46
CNKSR1-209ENST00000524529 GRIK5Q16478 980 aa12.17□□□□□ -0.46
CNKSR1-209ENST00000524529 LRRC24Q50LG9 513 aa12.17□□□□□ -0.46
CNKSR1-209ENST00000524529 TAF7LQ5H9L4 462 aa12.17□□□□□ -0.46
CNKSR1-209ENST00000524529 DEFB129Q9H1M3 183 aa12.17□□□□□ -0.46
CNKSR1-209ENST00000524529 MYH13Q9UKX3 1938 aa12.16□□□□□ -0.46
CNKSR1-209ENST00000524529 TBC1D8O95759 1140 aa12.16□□□□□ -0.46
CNKSR1-209ENST00000524529 TM4SF4P48230 202 aa12.16□□□□□ -0.46
CNKSR1-209ENST00000524529 TRMT2AQ8IZ69 625 aaKnown RBP12.16□□□□□ -0.46
CNKSR1-209ENST00000524529 VGLL2Q8N8G2 317 aa12.16□□□□□ -0.46
CNKSR1-209ENST00000524529 KLHDC4Q8TBB5 520 aa12.16□□□□□ -0.46
CNKSR1-209ENST00000524529 USP44Q9H0E7 712 aa12.16□□□□□ -0.46
CNKSR1-209ENST00000524529 R3HDMLQ9H3Y0 253 aa12.16□□□□□ -0.46
CNKSR1-209ENST00000524529 ANGEL1Q9UNK9 670 aaKnown RBP12.16□□□□□ -0.46
CNKSR1-209ENST00000524529 ZBED9Q6R2W3 1325 aa12.15□□□□□ -0.46
CNKSR1-209ENST00000524529 HIBADHP31937 336 aaKnown RBP12.15□□□□□ -0.46
CNKSR1-209ENST00000524529 NF2P35240 595 aa12.15□□□□□ -0.46
CNKSR1-209ENST00000524529 MAP3K11Q16584 847 aa12.15□□□□□ -0.46
CNKSR1-209ENST00000524529 NBPF12Q5TAG4 269 aaPredicted RBP12.15□□□□□ -0.46
CNKSR1-209ENST00000524529 CDAN1Q8IWY9 1227 aa12.15□□□□□ -0.46
CNKSR1-209ENST00000524529 REM2Q8IYK8 340 aaPredicted RBP12.15□□□□□ -0.46
CNKSR1-209ENST00000524529 CLMNQ96JQ2 1002 aa12.15□□□□□ -0.46
CNKSR1-209ENST00000524529 PTPRCP08575 1304 aa12.14□□□□□ -0.47
CNKSR1-209ENST00000524529 RFX5P48382 616 aaPredicted RBP12.14□□□□□ -0.47
CNKSR1-209ENST00000524529 MFSD14BQ5SR56 506 aa12.14□□□□□ -0.47
CNKSR1-209ENST00000524529 SPRYD7Q5W111 196 aa12.14□□□□□ -0.47
CNKSR1-209ENST00000524529 ARMC9Q7Z3E5 817 aa12.14□□□□□ -0.47
CNKSR1-209ENST00000524529 FBXO33Q7Z6M2 555 aa12.14□□□□□ -0.47
CNKSR1-209ENST00000524529 ZNF296Q8WUU4 475 aaPredicted RBP12.14□□□□□ -0.47
CNKSR1-209ENST00000524529 IQSEC3Q9UPP2 1182 aaPredicted RBP12.14□□□□□ -0.47
CNKSR1-209ENST00000524529 MROH5Q6ZUA9 1318 aa12.13□□□□□ -0.47
CNKSR1-209ENST00000524529 USP2O75604 605 aaPredicted RBP12.13□□□□□ -0.47
CNKSR1-209ENST00000524529 GJA5P36382 358 aa12.13□□□□□ -0.47
CNKSR1-209ENST00000524529 RASA3Q14644 834 aa12.13□□□□□ -0.47
CNKSR1-209ENST00000524529 CTU1Q7Z7A3 348 aaKnown RBP12.13□□□□□ -0.47
CNKSR1-209ENST00000524529 TDRD3Q9H7E2 651 aaKnown RBP12.13□□□□□ -0.47
CNKSR1-209ENST00000524529 VEZTQ9HBM0 779 aa12.13□□□□□ -0.47
CNKSR1-209ENST00000524529 ZNF70Q9UC06 446 aaPredicted RBP12.13□□□□□ -0.47
CNKSR1-209ENST00000524529 TTF2Q9UNY4 1162 aaKnown RBP12.13□□□□□ -0.47
CNKSR1-209ENST00000524529 RBM5P52756 815 aaKnown RBP eCLIP12.12□□□□□ -0.47
CNKSR1-209ENST00000524529 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
CNKSR1-209ENST00000524529 TEPSINQ96N21 525 aa12.12□□□□□ -0.47
CNKSR1-209ENST00000524529 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.12□□□□□ -0.47
CNKSR1-209ENST00000524529 PPP2R3BQ9Y5P8 575 aa12.12□□□□□ -0.47
CNKSR1-209ENST00000524529 GPR25O00155 361 aa12.11□□□□□ -0.47
CNKSR1-209ENST00000524529 PDE8BO95263 885 aa12.11□□□□□ -0.47
CNKSR1-209ENST00000524529 CT47B1P0C2W7 299 aaPredicted RBP12.11□□□□□ -0.47
CNKSR1-209ENST00000524529 FGFR2P21802 821 aa12.11□□□□□ -0.47
CNKSR1-209ENST00000524529 CRKP46108 304 aa12.11□□□□□ -0.47
CNKSR1-209ENST00000524529 BCAMP50895 628 aa12.11□□□□□ -0.47
CNKSR1-209ENST00000524529 METTL24Q5JXM2 366 aa12.11□□□□□ -0.47
CNKSR1-209ENST00000524529 DZIP1LQ8IYY4 767 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms