RNA–Protein interactions for RNA: ENST00000524500.5

CTSB-206, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-206ENST00000524500 CAVIN4Q5BKX8 364 aa23.58■■□□□ 1.37
CTSB-206ENST00000524500 FAM84BQ96KN1 310 aaPredicted RBP23.58■■□□□ 1.37
CTSB-206ENST00000524500 POLR2AP24928 1970 aaKnown RBP23.58■■□□□ 1.36
CTSB-206ENST00000524500 ZNF646O15015 1829 aaPredicted RBP23.57■■□□□ 1.36
CTSB-206ENST00000524500 DLGAP5Q15398 846 aa23.57■■□□□ 1.36
CTSB-206ENST00000524500 CERS5Q8N5B7 392 aa23.57■■□□□ 1.36
CTSB-206ENST00000524500 TDRD7Q8NHU6 1098 aaKnown RBP23.57■■□□□ 1.36
CTSB-206ENST00000524500 EYA2O00167 538 aa23.56■■□□□ 1.36
CTSB-206ENST00000524500 AOC2O75106 756 aa23.56■■□□□ 1.36
CTSB-206ENST00000524500 INTS3Q68E01 1043 aaKnown RBP23.56■■□□□ 1.36
CTSB-206ENST00000524500 RGMBQ6NW40 437 aa23.56■■□□□ 1.36
CTSB-206ENST00000524500 JAG2Q9Y219 1238 aa23.56■■□□□ 1.36
CTSB-206ENST00000524500 FAM205AQ6ZU69 1335 aa23.56■■□□□ 1.36
CTSB-206ENST00000524500 F8W031 263 aaPredicted RBP23.55■■□□□ 1.36
CTSB-206ENST00000524500 RFX5P48382 616 aaPredicted RBP23.55■■□□□ 1.36
CTSB-206ENST00000524500 APOBEC3FQ8IUX4 373 aaKnown RBP23.55■■□□□ 1.36
CTSB-206ENST00000524500 VGLL2Q8N8G2 317 aa23.55■■□□□ 1.36
CTSB-206ENST00000524500 FRAT1Q92837 279 aaPredicted RBP23.55■■□□□ 1.36
CTSB-206ENST00000524500 LRRFIP2Q9Y608 721 aaKnown RBP23.55■■□□□ 1.36
CTSB-206ENST00000524500 MYO1BO43795 1136 aa23.54■■□□□ 1.36
CTSB-206ENST00000524500 FRAT2O75474 233 aaPredicted RBP23.54■■□□□ 1.36
CTSB-206ENST00000524500 BCAR3O75815 825 aa23.54■■□□□ 1.36
CTSB-206ENST00000524500 GNAI3P08754 354 aa23.54■■□□□ 1.36
CTSB-206ENST00000524500 IFIT1P09914 478 aaKnown RBP23.54■■□□□ 1.36
CTSB-206ENST00000524500 NF2P35240 595 aa23.54■■□□□ 1.36
CTSB-206ENST00000524500 FKBP1BP68106 108 aa23.54■■□□□ 1.36
CTSB-206ENST00000524500 PTPN12Q05209 780 aaKnown RBP23.54■■□□□ 1.36
CTSB-206ENST00000524500 NOGQ13253 232 aa23.54■■□□□ 1.36
CTSB-206ENST00000524500 PUM3Q15397 648 aaKnown RBP23.54■■□□□ 1.36
CTSB-206ENST00000524500 MFSD14BQ5SR56 506 aa23.54■■□□□ 1.36
CTSB-206ENST00000524500 ATF7IPQ6VMQ6 1270 aa23.54■■□□□ 1.36
CTSB-206ENST00000524500 FBXO33Q7Z6M2 555 aa23.54■■□□□ 1.36
CTSB-206ENST00000524500 MTMR14Q8NCE2 650 aa23.54■■□□□ 1.36
CTSB-206ENST00000524500 CCDC102AQ96A19 550 aa23.54■■□□□ 1.36
CTSB-206ENST00000524500 PRDM10Q9NQV6 1147 aa23.54■■□□□ 1.36
CTSB-206ENST00000524500 FBXO3Q9UK99 471 aa23.54■■□□□ 1.36
CTSB-206ENST00000524500 SCAF8Q9UPN6 1271 aaKnown RBP23.54■■□□□ 1.36
CTSB-206ENST00000524500 THSD7BQ9C0I4 1608 aa23.53■■□□□ 1.36
CTSB-206ENST00000524500 ZNF157P51786 506 aaPredicted RBP23.53■■□□□ 1.36
CTSB-206ENST00000524500 TNS4Q8IZW8 715 aa23.53■■□□□ 1.36
CTSB-206ENST00000524500 ZBED3Q96IU2 234 aaPredicted RBP23.53■■□□□ 1.36
CTSB-206ENST00000524500 MEIS3Q99687 375 aa23.53■■□□□ 1.36
CTSB-206ENST00000524500 TRIM27P14373 513 aa23.52■■□□□ 1.36
CTSB-206ENST00000524500 CFAP100Q494V2 611 aa23.52■■□□□ 1.36
CTSB-206ENST00000524500 RBM5P52756 815 aaKnown RBP eCLIP23.51■■□□□ 1.35
CTSB-206ENST00000524500 SIL1Q9H173 461 aa23.51■■□□□ 1.35
CTSB-206ENST00000524500 CIAO1O76071 339 aa23.5■■□□□ 1.35
CTSB-206ENST00000524500 SLC5A1P13866 664 aa23.5■■□□□ 1.35
CTSB-206ENST00000524500 LBX1P52954 281 aa23.5■■□□□ 1.35
CTSB-206ENST00000524500 PRAMEF18Q5VWM3 479 aa23.5■■□□□ 1.35
CTSB-206ENST00000524500 TBC1D22AQ8WUA7 517 aa23.5■■□□□ 1.35
CTSB-206ENST00000524500 LPIN2Q92539 896 aa23.5■■□□□ 1.35
CTSB-206ENST00000524500 TTF2Q9UNY4 1162 aaKnown RBP23.5■■□□□ 1.35
CTSB-206ENST00000524500 SPDYE2BA6NHP3 402 aa23.49■■□□□ 1.35
CTSB-206ENST00000524500 CA12O43570 354 aa23.49■■□□□ 1.35
CTSB-206ENST00000524500 SPDYE6P0CI01 402 aa23.49■■□□□ 1.35
CTSB-206ENST00000524500 HSPA8P11142 646 aaKnown RBP23.49■■□□□ 1.35
CTSB-206ENST00000524500 FGFR2P21802 821 aa23.49■■□□□ 1.35
CTSB-206ENST00000524500 CHAF1AQ13111 956 aaPredicted RBP23.49■■□□□ 1.35
CTSB-206ENST00000524500 TTLL12Q14166 644 aaPredicted RBP23.49■■□□□ 1.35
CTSB-206ENST00000524500 ATG9AQ7Z3C6 839 aa23.49■■□□□ 1.35
CTSB-206ENST00000524500 CEP126Q9P2H0 1117 aa23.49■■□□□ 1.35
CTSB-206ENST00000524500 IQSEC3Q9UPP2 1182 aaPredicted RBP23.49■■□□□ 1.35
CTSB-206ENST00000524500 ZBED9Q6R2W3 1325 aa23.49■■□□□ 1.35
CTSB-206ENST00000524500 BCAMP50895 628 aa23.48■■□□□ 1.35
CTSB-206ENST00000524500 ZKSCAN2Q63HK3 967 aa23.48■■□□□ 1.35
CTSB-206ENST00000524500 CLUAP1Q96AJ1 413 aa23.48■■□□□ 1.35
CTSB-206ENST00000524500 SERPINA10Q9UK55 444 aa23.48■■□□□ 1.35
CTSB-206ENST00000524500 FAM155AB1AL88 458 aaPredicted RBP23.47■■□□□ 1.35
CTSB-206ENST00000524500 IL15P40933 162 aaPredicted RBP23.47■■□□□ 1.35
CTSB-206ENST00000524500 PRMT6Q96LA8 375 aaPredicted RBP23.47■■□□□ 1.35
CTSB-206ENST00000524500 DEFB129Q9H1M3 183 aa23.47■■□□□ 1.35
CTSB-206ENST00000524500 PAPPA2Q9BXP8 1791 aa23.47■■□□□ 1.35
CTSB-206ENST00000524500 COL1A1P02452 1464 aaPredicted RBP23.46■■□□□ 1.35
CTSB-206ENST00000524500 COPRSQ9NQ92 184 aa23.46■■□□□ 1.35
CTSB-206ENST00000524500 PCDHAC2Q9Y5I4 1007 aa23.46■■□□□ 1.35
CTSB-206ENST00000524500 PPP2R3BQ9Y5P8 575 aa23.46■■□□□ 1.35
CTSB-206ENST00000524500 CLRN2A0PK11 232 aa23.45■■□□□ 1.34
CTSB-206ENST00000524500 SRGAP3O43295 1099 aa23.45■■□□□ 1.34
CTSB-206ENST00000524500 GNAI2P04899 355 aa23.45■■□□□ 1.34
CTSB-206ENST00000524500 SLC10A3P09131 477 aa23.45■■□□□ 1.34
CTSB-206ENST00000524500 ARMC9Q7Z3E5 817 aa23.45■■□□□ 1.34
CTSB-206ENST00000524500 VEZTQ9HBM0 779 aa23.45■■□□□ 1.34
CTSB-206ENST00000524500 PA2G4Q9UQ80 394 aaKnown RBP23.45■■□□□ 1.34
CTSB-206ENST00000524500 UBE2Q2LH0YL09 131 aa23.44■■□□□ 1.34
CTSB-206ENST00000524500 ATP2B3Q16720 1220 aa23.44■■□□□ 1.34
CTSB-206ENST00000524500 MOB2Q70IA6 237 aa23.44■■□□□ 1.34
CTSB-206ENST00000524500 ZIC5Q96T25 663 aa23.44■■□□□ 1.34
CTSB-206ENST00000524500 TNNQ9UQP3 1299 aa23.44■■□□□ 1.34
CTSB-206ENST00000524500 CRKP46108 304 aa23.43■■□□□ 1.34
CTSB-206ENST00000524500 KIF23Q02241 960 aaPredicted RBP23.43■■□□□ 1.34
CTSB-206ENST00000524500 MTX1Q13505 466 aa23.43■■□□□ 1.34
CTSB-206ENST00000524500 GNL3LQ9NVN8 582 aaKnown RBP23.43■■□□□ 1.34
CTSB-206ENST00000524500 SUGT1Q9Y2Z0 365 aa23.43■■□□□ 1.34
CTSB-206ENST00000524500 HDLBPQ00341 1268 aaKnown RBP23.42■■□□□ 1.34
CTSB-206ENST00000524500 TNFAIP1Q13829 316 aa23.42■■□□□ 1.34
CTSB-206ENST00000524500 RASAL3Q86YV0 1011 aa23.42■■□□□ 1.34
CTSB-206ENST00000524500 FTSJ3Q8IY81 847 aaKnown RBP23.42■■□□□ 1.34
CTSB-206ENST00000524500 REM2Q8IYK8 340 aaPredicted RBP23.42■■□□□ 1.34
CTSB-206ENST00000524500 DZIP1LQ8IYY4 767 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms