RNA–Protein interactions for RNA: ENST00000521589.5

NPIPB3-205, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-205ENST00000521589 SLC10A3P09131 477 aa11.03□□□□□ -0.64
NPIPB3-205ENST00000521589 APOBEC3FQ8IUX4 373 aaKnown RBP11.03□□□□□ -0.64
NPIPB3-205ENST00000521589 VGLL2Q8N8G2 317 aa11.03□□□□□ -0.64
NPIPB3-205ENST00000521589 TDRD7Q8NHU6 1098 aaKnown RBP11.03□□□□□ -0.64
NPIPB3-205ENST00000521589 FAM84BQ96KN1 310 aaPredicted RBP11.03□□□□□ -0.64
NPIPB3-205ENST00000521589 ZIC5Q96T25 663 aa11.03□□□□□ -0.64
NPIPB3-205ENST00000521589 COL1A1P02452 1464 aaPredicted RBP11.03□□□□□ -0.64
NPIPB3-205ENST00000521589 PLIN1O60240 522 aa11.02□□□□□ -0.65
NPIPB3-205ENST00000521589 HIBADHP31937 336 aaKnown RBP11.02□□□□□ -0.65
NPIPB3-205ENST00000521589 ZNF157P51786 506 aaPredicted RBP11.02□□□□□ -0.65
NPIPB3-205ENST00000521589 FBXO33Q7Z6M2 555 aa11.02□□□□□ -0.65
NPIPB3-205ENST00000521589 KIF16BQ96L93 1317 aa11.02□□□□□ -0.65
NPIPB3-205ENST00000521589 SPDYE2BA6NHP3 402 aa11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 PDE8BO95263 885 aa11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 SPDYE6P0CI01 402 aa11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 GYG1P46976 350 aa11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 RFX5P48382 616 aaPredicted RBP11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 RARSP54136 660 aaKnown RBP11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 DLGAP5Q15398 846 aa11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 LRRC24Q50LG9 513 aa11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 METTL24Q5JXM2 366 aa11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 RASAL3Q86YV0 1011 aa11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 API5Q9BZZ5 524 aaKnown RBP11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 SAGE1Q9NXZ1 904 aa11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 NOB1Q9ULX3 412 aaKnown RBP11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 SCAF8Q9UPN6 1271 aaKnown RBP11.01□□□□□ -0.65
NPIPB3-205ENST00000521589 NF2P35240 595 aa11□□□□□ -0.65
NPIPB3-205ENST00000521589 KIF23Q02241 960 aaPredicted RBP11□□□□□ -0.65
NPIPB3-205ENST00000521589 CFAP100Q494V2 611 aa11□□□□□ -0.65
NPIPB3-205ENST00000521589 MFSD14BQ5SR56 506 aa11□□□□□ -0.65
NPIPB3-205ENST00000521589 PRAMEF18Q5VWM3 479 aa11□□□□□ -0.65
NPIPB3-205ENST00000521589 REM2Q8IYK8 340 aaPredicted RBP11□□□□□ -0.65
NPIPB3-205ENST00000521589 KLHDC4Q8TBB5 520 aa11□□□□□ -0.65
NPIPB3-205ENST00000521589 ARHGAP45Q92619 1136 aa11□□□□□ -0.65
NPIPB3-205ENST00000521589 FBXO3Q9UK99 471 aa11□□□□□ -0.65
NPIPB3-205ENST00000521589 PPP2R3BQ9Y5P8 575 aa11□□□□□ -0.65
NPIPB3-205ENST00000521589 ARAP2Q8WZ64 1704 aa10.99□□□□□ -0.65
NPIPB3-205ENST00000521589 EYA2O00167 538 aa10.99□□□□□ -0.65
NPIPB3-205ENST00000521589 UBTFL1P0CB47 393 aaPredicted RBP10.99□□□□□ -0.65
NPIPB3-205ENST00000521589 FGFR2P21802 821 aa10.99□□□□□ -0.65
NPIPB3-205ENST00000521589 PTPN12Q05209 780 aaKnown RBP10.99□□□□□ -0.65
NPIPB3-205ENST00000521589 PUM3Q15397 648 aaKnown RBP10.99□□□□□ -0.65
NPIPB3-205ENST00000521589 PRMT6Q96LA8 375 aaPredicted RBP10.99□□□□□ -0.65
NPIPB3-205ENST00000521589 DEFB129Q9H1M3 183 aa10.99□□□□□ -0.65
NPIPB3-205ENST00000521589 TSKSQ9UJT2 592 aa10.99□□□□□ -0.65
NPIPB3-205ENST00000521589 SERPINA10Q9UK55 444 aa10.99□□□□□ -0.65
NPIPB3-205ENST00000521589 JAG2Q9Y219 1238 aa10.99□□□□□ -0.65
NPIPB3-205ENST00000521589 PCDHAC2Q9Y5I4 1007 aa10.99□□□□□ -0.65
NPIPB3-205ENST00000521589 ECM29Q5VYK3 1845 aa10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 F8W031 263 aaPredicted RBP10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 UBE2Q2LH0YL09 131 aa10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 MYO1BO43795 1136 aa10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 CIAO1O76071 339 aa10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 MAP3K11Q16584 847 aa10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 CAVIN4Q5BKX8 364 aa10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 LDLRAD1Q5T700 205 aa10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 INTS3Q68E01 1043 aaKnown RBP10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 MOB2Q70IA6 237 aa10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 ATG9AQ7Z3C6 839 aa10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 TBC1D22AQ8WUA7 517 aa10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 CSRNP1Q96S65 589 aa10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 HDAC5Q9UQL6 1122 aa10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 SSC5DA1L4H1 1573 aa10.98□□□□□ -0.65
NPIPB3-205ENST00000521589 ZBTB22O15209 634 aa10.97□□□□□ -0.65
NPIPB3-205ENST00000521589 IFIT1P09914 478 aaKnown RBP10.97□□□□□ -0.65
NPIPB3-205ENST00000521589 HDLBPQ00341 1268 aaKnown RBP10.97□□□□□ -0.65
NPIPB3-205ENST00000521589 SPDYE2Q495Y8 402 aa10.97□□□□□ -0.65
NPIPB3-205ENST00000521589 ARMC9Q7Z3E5 817 aa10.97□□□□□ -0.65
NPIPB3-205ENST00000521589 VPS37DQ86XT2 251 aa10.97□□□□□ -0.65
NPIPB3-205ENST00000521589 RNF186Q9NXI6 227 aa10.97□□□□□ -0.65
NPIPB3-205ENST00000521589 TTF2Q9UNY4 1162 aaKnown RBP10.97□□□□□ -0.65
NPIPB3-205ENST00000521589 SUGT1Q9Y2Z0 365 aa10.97□□□□□ -0.65
NPIPB3-205ENST00000521589 AOX1Q06278 1338 aa10.97□□□□□ -0.65
NPIPB3-205ENST00000521589 CLRN2A0PK11 232 aa10.96□□□□□ -0.65
NPIPB3-205ENST00000521589 UNCXA6NJT0 531 aa10.96□□□□□ -0.65
NPIPB3-205ENST00000521589 CAPN15O75808 1086 aa10.96□□□□□ -0.65
NPIPB3-205ENST00000521589 BCAMP50895 628 aa10.96□□□□□ -0.65
NPIPB3-205ENST00000521589 LPIN2Q92539 896 aa10.96□□□□□ -0.65
NPIPB3-205ENST00000521589 ABHD8Q96I13 439 aa10.96□□□□□ -0.65
NPIPB3-205ENST00000521589 MEIS3Q99687 375 aa10.96□□□□□ -0.65
NPIPB3-205ENST00000521589 MRIQ9BWK5 157 aa10.96□□□□□ -0.65
NPIPB3-205ENST00000521589 COPRSQ9NQ92 184 aa10.96□□□□□ -0.65
NPIPB3-205ENST00000521589 LRRFIP2Q9Y608 721 aaKnown RBP10.96□□□□□ -0.65
NPIPB3-205ENST00000521589 IPO8O15397 1037 aaKnown RBP10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 GNAI3P08754 354 aa10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 SLC5A1P13866 664 aa10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 TRIM27P14373 513 aa10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 CRKP46108 304 aa10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 MTX1Q13505 466 aa10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 TNFAIP1Q13829 316 aa10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 TTLL12Q14166 644 aaPredicted RBP10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 RASA3Q14644 834 aa10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 GRIK5Q16478 980 aa10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 SUPT20HL1Q3ZLR7 823 aa10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 DZIP1LQ8IYY4 767 aaKnown RBP10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 MIER1Q8N108 512 aa10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 VEZTQ9HBM0 779 aa10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 IQSEC3Q9UPP2 1182 aaPredicted RBP10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 CASP8AP2Q9UKL3 1982 aa10.95□□□□□ -0.66
NPIPB3-205ENST00000521589 AKAP11Q9UKA4 1901 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms