RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 AOX1Q06278 1338 aa25.71■■□□□ 1.71
PABPC1-217ENST00000521067 F8W031 263 aaPredicted RBP25.71■■□□□ 1.71
PABPC1-217ENST00000521067 MTMR14Q8NCE2 650 aa25.71■■□□□ 1.71
PABPC1-217ENST00000521067 SUCLG2Q96I99 432 aa25.71■■□□□ 1.71
PABPC1-217ENST00000521067 SRCIN1Q9C0H9 1055 aa25.71■■□□□ 1.71
PABPC1-217ENST00000521067 NF2P35240 595 aa25.7■■□□□ 1.7
PABPC1-217ENST00000521067 MLLT1Q03111 559 aaPredicted RBP25.7■■□□□ 1.7
PABPC1-217ENST00000521067 MKRN3Q13064 507 aaKnown RBP25.7■■□□□ 1.7
PABPC1-217ENST00000521067 DLGAP5Q15398 846 aa25.7■■□□□ 1.7
PABPC1-217ENST00000521067 LDLRAD1Q5T700 205 aa25.7■■□□□ 1.7
PABPC1-217ENST00000521067 ZNF804AQ7Z570 1209 aa25.7■■□□□ 1.7
PABPC1-217ENST00000521067 PUS3Q9BZE2 481 aaKnown RBP25.7■■□□□ 1.7
PABPC1-217ENST00000521067 DEFB129Q9H1M3 183 aa25.7■■□□□ 1.7
PABPC1-217ENST00000521067 CNNM1Q9NRU3 951 aa25.7■■□□□ 1.7
PABPC1-217ENST00000521067 TBC1D8O95759 1140 aa25.69■■□□□ 1.7
PABPC1-217ENST00000521067 NBPF7P0C2Y1 421 aaPredicted RBP25.69■■□□□ 1.7
PABPC1-217ENST00000521067 TM4SF4P48230 202 aa25.69■■□□□ 1.7
PABPC1-217ENST00000521067 TAF7LQ5H9L4 462 aa25.69■■□□□ 1.7
PABPC1-217ENST00000521067 PRMT6Q96LA8 375 aaPredicted RBP25.69■■□□□ 1.7
PABPC1-217ENST00000521067 CFAP100Q494V2 611 aa25.68■■□□□ 1.7
PABPC1-217ENST00000521067 AKAP11Q9UKA4 1901 aa25.68■■□□□ 1.7
PABPC1-217ENST00000521067 FKBP1AP62942 108 aaKnown RBP25.67■■□□□ 1.7
PABPC1-217ENST00000521067 ARMC9Q7Z3E5 817 aa25.67■■□□□ 1.7
PABPC1-217ENST00000521067 SPDYE2BA6NHP3 402 aa25.66■■□□□ 1.7
PABPC1-217ENST00000521067 SPDYE6P0CI01 402 aa25.66■■□□□ 1.7
PABPC1-217ENST00000521067 MRPL50Q8N5N7 158 aaKnown RBP25.66■■□□□ 1.7
PABPC1-217ENST00000521067 ANGEL1Q9UNK9 670 aaKnown RBP25.66■■□□□ 1.7
PABPC1-217ENST00000521067 UTYO14607 1347 aa25.65■■□□□ 1.7
PABPC1-217ENST00000521067 CLRN2A0PK11 232 aa25.65■■□□□ 1.7
PABPC1-217ENST00000521067 GYG1P46976 350 aa25.65■■□□□ 1.7
PABPC1-217ENST00000521067 CTU1Q7Z7A3 348 aaKnown RBP25.65■■□□□ 1.7
PABPC1-217ENST00000521067 TDRD7Q8NHU6 1098 aaKnown RBP25.65■■□□□ 1.7
PABPC1-217ENST00000521067 FAM84BQ96KN1 310 aaPredicted RBP25.65■■□□□ 1.7
PABPC1-217ENST00000521067 RIPOR2Q9Y4F9 1068 aa25.65■■□□□ 1.7
PABPC1-217ENST00000521067 A0A1B0GUL6 1792 aa25.64■■□□□ 1.7
PABPC1-217ENST00000521067 UBE4AQ14139 1066 aa25.64■■□□□ 1.7
PABPC1-217ENST00000521067 ZNF296Q8WUU4 475 aaPredicted RBP25.64■■□□□ 1.7
PABPC1-217ENST00000521067 R3HDMLQ9H3Y0 253 aa25.64■■□□□ 1.7
PABPC1-217ENST00000521067 TNRC18O15417 2968 aaPredicted RBP25.64■■□□□ 1.69
PABPC1-217ENST00000521067 FAM205AQ6ZU69 1335 aa25.63■■□□□ 1.69
PABPC1-217ENST00000521067 SPRYD7Q5W111 196 aa25.63■■□□□ 1.69
PABPC1-217ENST00000521067 BICC1Q9H694 974 aaKnown RBP25.63■■□□□ 1.69
PABPC1-217ENST00000521067 SSC5DA1L4H1 1573 aa25.63■■□□□ 1.69
PABPC1-217ENST00000521067 MAP3K11Q16584 847 aa25.62■■□□□ 1.69
PABPC1-217ENST00000521067 HIBADHP31937 336 aaKnown RBP25.61■■□□□ 1.69
PABPC1-217ENST00000521067 RABL6Q3YEC7 729 aaPredicted RBP25.61■■□□□ 1.69
PABPC1-217ENST00000521067 NBPF12Q5TAG4 269 aaPredicted RBP25.61■■□□□ 1.69
PABPC1-217ENST00000521067 ANKRD44Q8N8A2 993 aa25.61■■□□□ 1.69
PABPC1-217ENST00000521067 CLMNQ96JQ2 1002 aa25.61■■□□□ 1.69
PABPC1-217ENST00000521067 LRRC24Q50LG9 513 aa25.6■■□□□ 1.69
PABPC1-217ENST00000521067 MFSD14BQ5SR56 506 aa25.6■■□□□ 1.69
PABPC1-217ENST00000521067 VEZTQ9HBM0 779 aa25.6■■□□□ 1.69
PABPC1-217ENST00000521067 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.6■■□□□ 1.69
PABPC1-217ENST00000521067 PPP2R3BQ9Y5P8 575 aa25.6■■□□□ 1.69
PABPC1-217ENST00000521067 COL1A1P02452 1464 aaPredicted RBP25.6■■□□□ 1.69
PABPC1-217ENST00000521067 GPR25O00155 361 aa25.59■■□□□ 1.69
PABPC1-217ENST00000521067 RBM5P52756 815 aaKnown RBP eCLIP25.59■■□□□ 1.69
PABPC1-217ENST00000521067 GRIK5Q16478 980 aa25.59■■□□□ 1.69
PABPC1-217ENST00000521067 SSH1Q8WYL5 1049 aa25.59■■□□□ 1.69
PABPC1-217ENST00000521067 SLC10A4Q96EP9 437 aa25.59■■□□□ 1.69
PABPC1-217ENST00000521067 MYO1BO43795 1136 aa25.58■■□□□ 1.69
PABPC1-217ENST00000521067 SOX10P56693 466 aa25.58■■□□□ 1.69
PABPC1-217ENST00000521067 SREBF2Q12772 1141 aa25.58■■□□□ 1.69
PABPC1-217ENST00000521067 RASA3Q14644 834 aa25.58■■□□□ 1.69
PABPC1-217ENST00000521067 FBXO33Q7Z6M2 555 aa25.58■■□□□ 1.69
PABPC1-217ENST00000521067 TTF2Q9UNY4 1162 aaKnown RBP25.58■■□□□ 1.69
PABPC1-217ENST00000521067 USP2O75604 605 aaPredicted RBP25.57■■□□□ 1.68
PABPC1-217ENST00000521067 CFHR5Q9BXR6 569 aa25.57■■□□□ 1.68
PABPC1-217ENST00000521067 USP44Q9H0E7 712 aa25.57■■□□□ 1.68
PABPC1-217ENST00000521067 HPS5Q9UPZ3 1129 aa25.57■■□□□ 1.68
PABPC1-217ENST00000521067 MROH5Q6ZUA9 1318 aa25.57■■□□□ 1.68
PABPC1-217ENST00000521067 PPP1R12BO60237 982 aaPredicted RBP25.56■■□□□ 1.68
PABPC1-217ENST00000521067 SUPT20HL1Q3ZLR7 823 aa25.56■■□□□ 1.68
PABPC1-217ENST00000521067 NOM1Q5C9Z4 860 aaKnown RBP25.56■■□□□ 1.68
PABPC1-217ENST00000521067 KLHDC4Q8TBB5 520 aa25.56■■□□□ 1.68
PABPC1-217ENST00000521067 TDRD3Q9H7E2 651 aaKnown RBP25.56■■□□□ 1.68
PABPC1-217ENST00000521067 ZNF70Q9UC06 446 aaPredicted RBP25.56■■□□□ 1.68
PABPC1-217ENST00000521067 SERPINA10Q9UK55 444 aa25.56■■□□□ 1.68
PABPC1-217ENST00000521067 IQSEC3Q9UPP2 1182 aaPredicted RBP25.56■■□□□ 1.68
PABPC1-217ENST00000521067 SPDYE2Q495Y8 402 aa25.55■■□□□ 1.68
PABPC1-217ENST00000521067 CDAN1Q8IWY9 1227 aa25.55■■□□□ 1.68
PABPC1-217ENST00000521067 VGLL2Q8N8G2 317 aa25.55■■□□□ 1.68
PABPC1-217ENST00000521067 WNK4Q96J92 1243 aa25.55■■□□□ 1.68
PABPC1-217ENST00000521067 E9PSI1 815 aa25.54■■□□□ 1.68
PABPC1-217ENST00000521067 GJA5P36382 358 aa25.54■■□□□ 1.68
PABPC1-217ENST00000521067 SLFN5Q08AF3 891 aa25.54■■□□□ 1.68
PABPC1-217ENST00000521067 DZIP1LQ8IYY4 767 aaKnown RBP25.54■■□□□ 1.68
PABPC1-217ENST00000521067 PTPRCP08575 1304 aa25.54■■□□□ 1.68
PABPC1-217ENST00000521067 METTL24Q5JXM2 366 aa25.53■■□□□ 1.68
PABPC1-217ENST00000521067 IFNL1Q8IU54 200 aa25.53■■□□□ 1.68
PABPC1-217ENST00000521067 CDCA7LQ96GN5 454 aa25.53■■□□□ 1.68
PABPC1-217ENST00000521067 HTTP42858 3142 aa25.52■■□□□ 1.68
PABPC1-217ENST00000521067 MANSC4A6NHS7 340 aaPredicted RBP25.52■■□□□ 1.68
PABPC1-217ENST00000521067 IGF2BP3O00425 579 aaKnown RBP eCLIP25.52■■□□□ 1.688e-17■■■□□ 18
PABPC1-217ENST00000521067 PDE8BO95263 885 aa25.52■■□□□ 1.68
PABPC1-217ENST00000521067 ZBTB48P10074 688 aaPredicted RBP25.52■■□□□ 1.68
PABPC1-217ENST00000521067 CRKP46108 304 aa25.52■■□□□ 1.68
PABPC1-217ENST00000521067 PKN2Q16513 984 aaKnown RBP25.52■■□□□ 1.68
PABPC1-217ENST00000521067 TEPSINQ96N21 525 aa25.52■■□□□ 1.68
PABPC1-217ENST00000521067 UNCXA6NJT0 531 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms