RNA–Protein interactions for RNA: ENST00000520952.1

CDH17-204, Transcript of cadherin 17, humanhuman

TSL 4

Gene CDH17, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-204ENST00000520952 TM4SF4P48230 202 aa11.62□□□□□ -0.55
CDH17-204ENST00000520952 IFIT5Q13325 482 aaKnown RBP11.62□□□□□ -0.55
CDH17-204ENST00000520952 LMBR1LQ6UX01 489 aa11.62□□□□□ -0.55
CDH17-204ENST00000520952 CTU1Q7Z7A3 348 aaKnown RBP11.62□□□□□ -0.55
CDH17-204ENST00000520952 REM2Q8IYK8 340 aaPredicted RBP11.62□□□□□ -0.55
CDH17-204ENST00000520952 ZNF296Q8WUU4 475 aaPredicted RBP11.62□□□□□ -0.55
CDH17-204ENST00000520952 HDAC9Q9UKV0 1011 aa11.62□□□□□ -0.55
CDH17-204ENST00000520952 NF2P35240 595 aa11.61□□□□□ -0.55
CDH17-204ENST00000520952 DLGAP5Q15398 846 aa11.61□□□□□ -0.55
CDH17-204ENST00000520952 LDLRAD1Q5T700 205 aa11.61□□□□□ -0.55
CDH17-204ENST00000520952 PRMT6Q96LA8 375 aaPredicted RBP11.61□□□□□ -0.55
CDH17-204ENST00000520952 DEFB129Q9H1M3 183 aa11.61□□□□□ -0.55
CDH17-204ENST00000520952 ANGEL1Q9UNK9 670 aaKnown RBP11.61□□□□□ -0.55
CDH17-204ENST00000520952 PDE4DIPQ5VU43 2346 aa11.6□□□□□ -0.55
CDH17-204ENST00000520952 CLRN2A0PK11 232 aa11.6□□□□□ -0.55
CDH17-204ENST00000520952 IL1R1P14778 569 aa11.6□□□□□ -0.55
CDH17-204ENST00000520952 CFAP100Q494V2 611 aa11.6□□□□□ -0.55
CDH17-204ENST00000520952 C15orf52Q6ZUT6 534 aaKnown RBP11.6□□□□□ -0.55
CDH17-204ENST00000520952 ARMC9Q7Z3E5 817 aa11.6□□□□□ -0.55
CDH17-204ENST00000520952 APOBEC3FQ8IUX4 373 aaKnown RBP11.6□□□□□ -0.55
CDH17-204ENST00000520952 HPS5Q9UPZ3 1129 aa11.6□□□□□ -0.55
CDH17-204ENST00000520952 GPR25O00155 361 aa11.59□□□□□ -0.55
CDH17-204ENST00000520952 GRM8O00222 908 aa11.59□□□□□ -0.55
CDH17-204ENST00000520952 ANP32CO43423 234 aa11.59□□□□□ -0.55
CDH17-204ENST00000520952 MMP14P50281 582 aa11.59□□□□□ -0.55
CDH17-204ENST00000520952 SPRYD7Q5W111 196 aa11.59□□□□□ -0.55
CDH17-204ENST00000520952 SLC4A10Q6U841 1118 aa11.59□□□□□ -0.55
CDH17-204ENST00000520952 LDHAL6AQ6ZMR3 332 aa11.59□□□□□ -0.55
CDH17-204ENST00000520952 CLMNQ96JQ2 1002 aa11.59□□□□□ -0.55
CDH17-204ENST00000520952 PUS3Q9BZE2 481 aaKnown RBP11.59□□□□□ -0.55
CDH17-204ENST00000520952 CACNA1FO60840 1977 aa11.59□□□□□ -0.55
CDH17-204ENST00000520952 SLC34A2O95436 690 aa11.58□□□□□ -0.56
CDH17-204ENST00000520952 CCDC57Q2TAC2 916 aa11.58□□□□□ -0.56
CDH17-204ENST00000520952 TAF7LQ5H9L4 462 aa11.58□□□□□ -0.56
CDH17-204ENST00000520952 NBPF12Q5TAG4 269 aaPredicted RBP11.58□□□□□ -0.56
CDH17-204ENST00000520952 FAM9BQ8IZU0 186 aa11.58□□□□□ -0.56
CDH17-204ENST00000520952 MTMR14Q8NCE2 650 aa11.58□□□□□ -0.56
CDH17-204ENST00000520952 SLC10A4Q96EP9 437 aa11.58□□□□□ -0.56
CDH17-204ENST00000520952 KAZALD1Q96I82 304 aa11.58□□□□□ -0.56
CDH17-204ENST00000520952 VEZTQ9HBM0 779 aa11.58□□□□□ -0.56
CDH17-204ENST00000520952 CNNM1Q9NRU3 951 aa11.58□□□□□ -0.56
CDH17-204ENST00000520952 C9orf78Q9NZ63 289 aaPredicted RBP11.58□□□□□ -0.56
CDH17-204ENST00000520952 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
CDH17-204ENST00000520952 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
CDH17-204ENST00000520952 GYG1P46976 350 aa11.57□□□□□ -0.56
CDH17-204ENST00000520952 RBM5P52756 815 aaKnown RBP eCLIP11.57□□□□□ -0.56
CDH17-204ENST00000520952 ZNF804AQ7Z570 1209 aa11.57□□□□□ -0.56
CDH17-204ENST00000520952 SUCLG2Q96I99 432 aa11.57□□□□□ -0.56
CDH17-204ENST00000520952 SSC5DA1L4H1 1573 aa11.57□□□□□ -0.56
CDH17-204ENST00000520952 USP2O75604 605 aaPredicted RBP11.56□□□□□ -0.56
CDH17-204ENST00000520952 NBPF7P0C2Y1 421 aaPredicted RBP11.56□□□□□ -0.56
CDH17-204ENST00000520952 HOXD11P31277 338 aaPredicted RBP11.56□□□□□ -0.56
CDH17-204ENST00000520952 GJA5P36382 358 aa11.56□□□□□ -0.56
CDH17-204ENST00000520952 SREBF2Q12772 1141 aa11.56□□□□□ -0.56
CDH17-204ENST00000520952 RASA3Q14644 834 aa11.56□□□□□ -0.56
CDH17-204ENST00000520952 GRIK5Q16478 980 aa11.56□□□□□ -0.56
CDH17-204ENST00000520952 FAM84BQ96KN1 310 aaPredicted RBP11.56□□□□□ -0.56
CDH17-204ENST00000520952 RNF39Q9H2S5 420 aa11.56□□□□□ -0.56
CDH17-204ENST00000520952 A0A1B0GUL6 1792 aa11.56□□□□□ -0.56
CDH17-204ENST00000520952 ZNF316A6NFI3 1004 aaPredicted RBP11.55□□□□□ -0.56
CDH17-204ENST00000520952 IGF2BP3O00425 579 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDH17-204ENST00000520952 FKTNO75072 461 aa11.55□□□□□ -0.56
CDH17-204ENST00000520952 ALDH1L1O75891 902 aa11.55□□□□□ -0.56
CDH17-204ENST00000520952 HIBADHP31937 336 aaKnown RBP11.55□□□□□ -0.56
CDH17-204ENST00000520952 FKBP1AP62942 108 aaKnown RBP11.55□□□□□ -0.56
CDH17-204ENST00000520952 PKN2Q16513 984 aaKnown RBP11.55□□□□□ -0.56
CDH17-204ENST00000520952 MAP3K11Q16584 847 aa11.55□□□□□ -0.56
CDH17-204ENST00000520952 IFNL1Q8IU54 200 aa11.55□□□□□ -0.56
CDH17-204ENST00000520952 CDAN1Q8IWY9 1227 aa11.55□□□□□ -0.56
CDH17-204ENST00000520952 TDRD7Q8NHU6 1098 aaKnown RBP11.55□□□□□ -0.56
CDH17-204ENST00000520952 WNK4Q96J92 1243 aa11.55□□□□□ -0.56
CDH17-204ENST00000520952 SRCIN1Q9C0H9 1055 aa11.55□□□□□ -0.56
CDH17-204ENST00000520952 TDRD3Q9H7E2 651 aaKnown RBP11.55□□□□□ -0.56
CDH17-204ENST00000520952 RIPOR2Q9Y4F9 1068 aa11.55□□□□□ -0.56
CDH17-204ENST00000520952 FAM205AQ6ZU69 1335 aa11.55□□□□□ -0.56
CDH17-204ENST00000520952 HTTP42858 3142 aa11.54□□□□□ -0.56
CDH17-204ENST00000520952 MYO1BO43795 1136 aa11.54□□□□□ -0.56
CDH17-204ENST00000520952 PPP1R12BO60237 982 aaPredicted RBP11.54□□□□□ -0.56
CDH17-204ENST00000520952 UBE4AQ14139 1066 aa11.54□□□□□ -0.56
CDH17-204ENST00000520952 SUPT20HL1Q3ZLR7 823 aa11.54□□□□□ -0.56
CDH17-204ENST00000520952 LRRC24Q50LG9 513 aa11.54□□□□□ -0.56
CDH17-204ENST00000520952 MFSD14BQ5SR56 506 aa11.54□□□□□ -0.56
CDH17-204ENST00000520952 ZNF70Q9UC06 446 aaPredicted RBP11.54□□□□□ -0.56
CDH17-204ENST00000520952 TTF2Q9UNY4 1162 aaKnown RBP11.54□□□□□ -0.56
CDH17-204ENST00000520952 IQSEC3Q9UPP2 1182 aaPredicted RBP11.54□□□□□ -0.56
CDH17-204ENST00000520952 CENPFP49454 3210 aa11.53□□□□□ -0.56
CDH17-204ENST00000520952 MANSC4A6NHS7 340 aaPredicted RBP11.53□□□□□ -0.56
CDH17-204ENST00000520952 NOM1Q5C9Z4 860 aaKnown RBP11.53□□□□□ -0.56
CDH17-204ENST00000520952 FBXO46Q6PJ61 603 aaPredicted RBP11.53□□□□□ -0.56
CDH17-204ENST00000520952 ANKRD44Q8N8A2 993 aa11.53□□□□□ -0.56
CDH17-204ENST00000520952 KLHDC4Q8TBB5 520 aa11.53□□□□□ -0.56
CDH17-204ENST00000520952 PTPN18Q99952 460 aa11.53□□□□□ -0.56
CDH17-204ENST00000520952 CFHR5Q9BXR6 569 aa11.53□□□□□ -0.56
CDH17-204ENST00000520952 BICC1Q9H694 974 aaKnown RBP11.53□□□□□ -0.56
CDH17-204ENST00000520952 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
CDH17-204ENST00000520952 PPP2R3BQ9Y5P8 575 aa11.53□□□□□ -0.56
CDH17-204ENST00000520952 TCP10L2B9ZVM9 353 aa11.52□□□□□ -0.57
CDH17-204ENST00000520952 INHBEP58166 350 aa11.52□□□□□ -0.57
CDH17-204ENST00000520952 CAP1Q01518 475 aa11.52□□□□□ -0.57
CDH17-204ENST00000520952 CHAF1AQ13111 956 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms