RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 ANKRD44Q8N8A2 993 aa13.5□□□□□ -0.25
PVT1-209ENST00000520913 KIF16BQ96L93 1317 aa13.49□□□□□ -0.25
PVT1-209ENST00000520913 APOBEC3FQ8IUX4 373 aaKnown RBP13.49□□□□□ -0.25
PVT1-209ENST00000520913 SLC10A3P09131 477 aa13.48□□□□□ -0.25
PVT1-209ENST00000520913 NF2P35240 595 aa13.48□□□□□ -0.25
PVT1-209ENST00000520913 ZNF157P51786 506 aaPredicted RBP13.48□□□□□ -0.25
PVT1-209ENST00000520913 CERS5Q8N5B7 392 aa13.48□□□□□ -0.25
PVT1-209ENST00000520913 CCDC102AQ96A19 550 aa13.48□□□□□ -0.25
PVT1-209ENST00000520913 PUS3Q9BZE2 481 aaKnown RBP13.48□□□□□ -0.25
PVT1-209ENST00000520913 USP44Q9H0E7 712 aa13.48□□□□□ -0.25
PVT1-209ENST00000520913 FAM205AQ6ZU69 1335 aa13.47□□□□□ -0.25
PVT1-209ENST00000520913 FAM155AB1AL88 458 aaPredicted RBP13.47□□□□□ -0.25
PVT1-209ENST00000520913 METTL24Q5JXM2 366 aa13.47□□□□□ -0.25
PVT1-209ENST00000520913 MTMR14Q8NCE2 650 aa13.47□□□□□ -0.25
PVT1-209ENST00000520913 ZBED3Q96IU2 234 aaPredicted RBP13.47□□□□□ -0.25
PVT1-209ENST00000520913 API5Q9BZZ5 524 aaKnown RBP13.47□□□□□ -0.25
PVT1-209ENST00000520913 RIPOR2Q9Y4F9 1068 aa13.47□□□□□ -0.25
PVT1-209ENST00000520913 HIBADHP31937 336 aaKnown RBP13.46□□□□□ -0.25
PVT1-209ENST00000520913 DLGAP5Q15398 846 aa13.46□□□□□ -0.25
PVT1-209ENST00000520913 LRRC24Q50LG9 513 aa13.46□□□□□ -0.25
PVT1-209ENST00000520913 SCAF8Q9UPN6 1271 aaKnown RBP13.46□□□□□ -0.25
PVT1-209ENST00000520913 F8W031 263 aaPredicted RBP13.45□□□□□ -0.26
PVT1-209ENST00000520913 MYO1BO43795 1136 aa13.45□□□□□ -0.26
PVT1-209ENST00000520913 CAPN15O75808 1086 aa13.45□□□□□ -0.26
PVT1-209ENST00000520913 UBTFL1P0CB47 393 aaPredicted RBP13.45□□□□□ -0.26
PVT1-209ENST00000520913 GYG1P46976 350 aa13.45□□□□□ -0.26
PVT1-209ENST00000520913 RASAL3Q86YV0 1011 aa13.45□□□□□ -0.26
PVT1-209ENST00000520913 VGLL2Q8N8G2 317 aa13.45□□□□□ -0.26
PVT1-209ENST00000520913 TDRD7Q8NHU6 1098 aaKnown RBP13.45□□□□□ -0.26
PVT1-209ENST00000520913 TSKSQ9UJT2 592 aa13.45□□□□□ -0.26
PVT1-209ENST00000520913 NOB1Q9ULX3 412 aaKnown RBP13.45□□□□□ -0.26
PVT1-209ENST00000520913 JAG2Q9Y219 1238 aa13.45□□□□□ -0.26
PVT1-209ENST00000520913 SSC5DA1L4H1 1573 aa13.45□□□□□ -0.26
PVT1-209ENST00000520913 SPDYE2BA6NHP3 402 aa13.44□□□□□ -0.26
PVT1-209ENST00000520913 PDE8BO95263 885 aa13.44□□□□□ -0.26
PVT1-209ENST00000520913 SPDYE6P0CI01 402 aa13.44□□□□□ -0.26
PVT1-209ENST00000520913 RARSP54136 660 aaKnown RBP13.44□□□□□ -0.26
PVT1-209ENST00000520913 TTLL12Q14166 644 aaPredicted RBP13.44□□□□□ -0.26
PVT1-209ENST00000520913 CFAP100Q494V2 611 aa13.44□□□□□ -0.26
PVT1-209ENST00000520913 CAVIN4Q5BKX8 364 aa13.44□□□□□ -0.26
PVT1-209ENST00000520913 MFSD14BQ5SR56 506 aa13.44□□□□□ -0.26
PVT1-209ENST00000520913 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
PVT1-209ENST00000520913 KLHDC4Q8TBB5 520 aa13.44□□□□□ -0.26
PVT1-209ENST00000520913 FAM84BQ96KN1 310 aaPredicted RBP13.44□□□□□ -0.26
PVT1-209ENST00000520913 ZIC5Q96T25 663 aa13.44□□□□□ -0.26
PVT1-209ENST00000520913 SAGE1Q9NXZ1 904 aa13.44□□□□□ -0.26
PVT1-209ENST00000520913 PPP2R3BQ9Y5P8 575 aa13.44□□□□□ -0.26
PVT1-209ENST00000520913 MYH2Q9UKX2 1941 aa13.43□□□□□ -0.26
PVT1-209ENST00000520913 KIF23Q02241 960 aaPredicted RBP13.43□□□□□ -0.26
PVT1-209ENST00000520913 PUM3Q15397 648 aaKnown RBP13.43□□□□□ -0.26
PVT1-209ENST00000520913 PRAMEF18Q5VWM3 479 aa13.43□□□□□ -0.26
PVT1-209ENST00000520913 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
PVT1-209ENST00000520913 HDAC5Q9UQL6 1122 aa13.43□□□□□ -0.26
PVT1-209ENST00000520913 DOCK2Q92608 1830 aa13.43□□□□□ -0.26
PVT1-209ENST00000520913 EYA2O00167 538 aa13.42□□□□□ -0.26
PVT1-209ENST00000520913 FRAT2O75474 233 aaPredicted RBP13.42□□□□□ -0.26
PVT1-209ENST00000520913 IFIT1P09914 478 aaKnown RBP13.42□□□□□ -0.26
PVT1-209ENST00000520913 RFX5P48382 616 aaPredicted RBP13.42□□□□□ -0.26
PVT1-209ENST00000520913 RBM5P52756 815 aaKnown RBP eCLIP13.42□□□□□ -0.26
PVT1-209ENST00000520913 PTPN12Q05209 780 aaKnown RBP13.42□□□□□ -0.26
PVT1-209ENST00000520913 MOB2Q70IA6 237 aa13.42□□□□□ -0.26
PVT1-209ENST00000520913 TBC1D22AQ8WUA7 517 aa13.42□□□□□ -0.26
PVT1-209ENST00000520913 ARHGAP45Q92619 1136 aa13.42□□□□□ -0.26
PVT1-209ENST00000520913 SERPINA10Q9UK55 444 aa13.42□□□□□ -0.26
PVT1-209ENST00000520913 FBXO3Q9UK99 471 aa13.42□□□□□ -0.26
PVT1-209ENST00000520913 AK9Q5TCS8 1911 aa13.42□□□□□ -0.26
PVT1-209ENST00000520913 CLRN2A0PK11 232 aa13.41□□□□□ -0.26
PVT1-209ENST00000520913 UBE2Q2LH0YL09 131 aa13.41□□□□□ -0.26
PVT1-209ENST00000520913 SLC5A1P13866 664 aa13.41□□□□□ -0.26
PVT1-209ENST00000520913 ARMC9Q7Z3E5 817 aa13.41□□□□□ -0.26
PVT1-209ENST00000520913 FBXO33Q7Z6M2 555 aa13.41□□□□□ -0.26
PVT1-209ENST00000520913 DEFB129Q9H1M3 183 aa13.41□□□□□ -0.26
PVT1-209ENST00000520913 VEZTQ9HBM0 779 aa13.41□□□□□ -0.26
PVT1-209ENST00000520913 TTF2Q9UNY4 1162 aaKnown RBP13.41□□□□□ -0.26
PVT1-209ENST00000520913 IQSEC3Q9UPP2 1182 aaPredicted RBP13.41□□□□□ -0.26
PVT1-209ENST00000520913 PCDHAC2Q9Y5I4 1007 aa13.41□□□□□ -0.26
PVT1-209ENST00000520913 MAST2Q6P0Q8 1798 aa13.4□□□□□ -0.26
PVT1-209ENST00000520913 FGFR2P21802 821 aa13.4□□□□□ -0.26
PVT1-209ENST00000520913 CHAF1AQ13111 956 aaPredicted RBP13.4□□□□□ -0.26
PVT1-209ENST00000520913 TNFAIP1Q13829 316 aa13.4□□□□□ -0.26
PVT1-209ENST00000520913 DIEXFQ68CQ4 756 aaKnown RBP13.4□□□□□ -0.26
PVT1-209ENST00000520913 PRMT6Q96LA8 375 aaPredicted RBP13.4□□□□□ -0.26
PVT1-209ENST00000520913 MEIS3Q99687 375 aa13.4□□□□□ -0.26
PVT1-209ENST00000520913 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
PVT1-209ENST00000520913 MAST3O60307 1309 aa13.39□□□□□ -0.27
PVT1-209ENST00000520913 IPO8O15397 1037 aaKnown RBP13.39□□□□□ -0.27
PVT1-209ENST00000520913 CIAO1O76071 339 aa13.39□□□□□ -0.27
PVT1-209ENST00000520913 GNAI3P08754 354 aa13.39□□□□□ -0.27
PVT1-209ENST00000520913 HNRNPUQ00839 825 aaKnown RBP eCLIP13.39□□□□□ -0.27
PVT1-209ENST00000520913 PRKG1Q13976 671 aa13.39□□□□□ -0.27
PVT1-209ENST00000520913 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
PVT1-209ENST00000520913 INTS3Q68E01 1043 aaKnown RBP13.39□□□□□ -0.27
PVT1-209ENST00000520913 ATG9AQ7Z3C6 839 aa13.39□□□□□ -0.27
PVT1-209ENST00000520913 LPIN2Q92539 896 aa13.39□□□□□ -0.27
PVT1-209ENST00000520913 CSRNP1Q96S65 589 aa13.39□□□□□ -0.27
PVT1-209ENST00000520913 SIL1Q9H173 461 aa13.39□□□□□ -0.27
PVT1-209ENST00000520913 ANGEL1Q9UNK9 670 aaKnown RBP13.39□□□□□ -0.27
PVT1-209ENST00000520913 AOX1Q06278 1338 aa13.39□□□□□ -0.27
PVT1-209ENST00000520913 CRKP46108 304 aa13.38□□□□□ -0.27
PVT1-209ENST00000520913 BCAMP50895 628 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms