RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 SPTY2D1Q68D10 685 aaPredicted RBP6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 C15orf52Q6ZUT6 534 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 CLASRPQ8N2M8 674 aaKnown RBP6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 IL27Q8NEV9 243 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 UBE2Q2Q8WVN8 375 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 MEIS3Q99687 375 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 BACH2Q9BYV9 841 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 SEC31BQ9NQW1 1179 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 DUOX1Q9NRD9 1551 aa6.91□□□□□ -1.3
CTNNA1-220ENST00000520260 LRRC37AA6NMS7 1700 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 USP17L3A6NCW0 530 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 USP17L4A6NCW7 530 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 ZBTB7BO15156 539 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 PLIN1O60240 522 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 ECE2O60344 883 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 SURF6O75683 361 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 UQCRFS1P1P0C7P4 283 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 HIBADHP31937 336 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 GPSM2P81274 684 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 ATP8B2P98198 1209 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 ATP2B3Q16720 1220 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 STRIP1Q5VSL9 837 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 C3orf67Q6ZVT6 689 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 USP17L1Q7RTZ2 530 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 CERS3Q8IU89 383 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 AGBL3Q8NEM8 1001 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 JARID2Q92833 1246 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 FBXW7Q969H0 707 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 KIF1BPQ96EK5 621 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 NOL10Q9BSC4 688 aaKnown RBP6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 RWDD1Q9H446 243 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 GPR108Q9NPR9 543 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 HACL1Q9UJ83 578 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 COG6Q9Y2V7 657 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 SUGT1Q9Y2Z0 365 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 GJA3Q9Y6H8 435 aa6.9□□□□□ -1.3
CTNNA1-220ENST00000520260 SLX4Q8IY92 1834 aa6.9□□□□□ -1.31
CTNNA1-220ENST00000520260 CACNA1SQ13698 1873 aa6.9□□□□□ -1.31
CTNNA1-220ENST00000520260 FZD9O00144 591 aa6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 RIMBP2O15034 1052 aa6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 IFIT2P09913 472 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 FKBP1AP62942 108 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 USP50Q70EL3 339 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 ANKRD44Q8N8A2 993 aa6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 SMC1BQ8NDV3 1235 aa6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 WDR66Q8TBY9 1149 aa6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 PANK1Q8TE04 598 aa6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 DPF2Q92785 391 aa6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 GCC1Q96CN9 775 aa6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 HOOK2Q96ED9 719 aa6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 L3MBTL3Q96JM7 780 aaPredicted RBP6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 SIL1Q9H173 461 aa6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 TMOD2Q9NZR1 351 aa6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 DENND2AQ9ULE3 1009 aa6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 FER1L6Q2WGJ9 1857 aa6.89□□□□□ -1.31
CTNNA1-220ENST00000520260 TIAM2Q8IVF5 1701 aa6.88□□□□□ -1.31
CTNNA1-220ENST00000520260 PDS5AQ29RF7 1337 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-220ENST00000520260 NF2P35240 595 aa6.88□□□□□ -1.31
CTNNA1-220ENST00000520260 GSTO1P78417 241 aa6.88□□□□□ -1.31
CTNNA1-220ENST00000520260 PTPN12Q05209 780 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-220ENST00000520260 FSTL1Q12841 308 aa6.88□□□□□ -1.31
CTNNA1-220ENST00000520260 TNFAIP1Q13829 316 aa6.88□□□□□ -1.31
CTNNA1-220ENST00000520260 TTF1Q15361 905 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-220ENST00000520260 SSH3Q8TE77 659 aa6.88□□□□□ -1.31
CTNNA1-220ENST00000520260 ZC3H15Q8WU90 426 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-220ENST00000520260 LRRCC1Q9C099 1032 aa6.88□□□□□ -1.31
CTNNA1-220ENST00000520260 ADARB2Q9NS39 739 aaKnown RBP6.88□□□□□ -1.31
CTNNA1-220ENST00000520260 ZBTB40Q9NUA8 1239 aa6.88□□□□□ -1.31
CTNNA1-220ENST00000520260 ZNF609O15014 1411 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 ERC2O15083 957 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 TOMM70O94826 608 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 SASH1O94885 1247 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 USP17L8P0C7I0 530 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 TNNI2P48788 182 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 TTC39AQ5SRH9 613 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 TTLL5Q6EMB2 1281 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 CEP85Q6P2H3 762 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 RSBN1LQ6PCB5 846 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 LDHDQ86WU2 507 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 RBM46Q8TBY0 533 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 ZNF526Q8TF50 670 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 DCPSQ96C86 337 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 NEUROD6Q96NK8 337 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 DBNDD1Q9H9R9 158 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 POLLQ9UGP5 575 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 RIPOR2Q9Y4F9 1068 aa6.87□□□□□ -1.31
CTNNA1-220ENST00000520260 DICER1Q9UPY3 1922 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 MAP4K4O95819 1239 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 LDHCP07864 332 aa6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 IL1R1P14778 569 aa6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 EPHX2P34913 555 aa6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 GSE1Q14687 1217 aa6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 DOK7Q18PE1 504 aa6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 EPHA10Q5JZY3 1008 aa6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 ZSCAN25Q6NSZ9 544 aa6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 DZIP1Q86YF9 867 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 ZNF784Q8NCA9 323 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 ZNF594Q96JF6 807 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.86□□□□□ -1.31
CTNNA1-220ENST00000520260 CD209Q9NNX6 404 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms