RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 KANSL3Q9P2N6 904 aa4.48□□□□□ -1.69
PABPC1-211ENST00000519596 MTMR7Q9Y216 660 aa4.48□□□□□ -1.69
PABPC1-211ENST00000519596 PDE2AO00408 941 aaPredicted RBP4.47□□□□□ -1.69
PABPC1-211ENST00000519596 GAS2O43903 313 aaKnown RBP4.47□□□□□ -1.69
PABPC1-211ENST00000519596 SPOCD1Q6ZMY3 1216 aa4.47□□□□□ -1.69
PABPC1-211ENST00000519596 NFXL1Q6ZNB6 911 aa4.47□□□□□ -1.69
PABPC1-211ENST00000519596 ATCAYQ86WG3 371 aa4.47□□□□□ -1.69
PABPC1-211ENST00000519596 CLEC10AQ8IUN9 316 aa4.47□□□□□ -1.69
PABPC1-211ENST00000519596 HELQQ8TDG4 1101 aa4.47□□□□□ -1.69
PABPC1-211ENST00000519596 ASIC4Q96FT7 647 aa4.47□□□□□ -1.69
PABPC1-211ENST00000519596 KLHDC7BQ96G42 594 aa4.47□□□□□ -1.69
PABPC1-211ENST00000519596 MYRFLQ96LU7 910 aa4.47□□□□□ -1.69
PABPC1-211ENST00000519596 RUSC1Q9BVN2 902 aa4.47□□□□□ -1.69
PABPC1-211ENST00000519596 RNF208Q9H0X6 261 aa4.47□□□□□ -1.69
PABPC1-211ENST00000519596 KCNK4Q9NYG8 393 aa4.47□□□□□ -1.69
PABPC1-211ENST00000519596 SEPT3Q9UH03 358 aa4.47□□□□□ -1.69
PABPC1-211ENST00000519596 DDX3YO15523 660 aaKnown RBP4.46□□□□□ -1.7
PABPC1-211ENST00000519596 EIF4EBP3O60516 100 aaPredicted RBP4.46□□□□□ -1.7
PABPC1-211ENST00000519596 BMP3P12645 472 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 EDN3P14138 238 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 ITGB5P18084 799 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 MZF1P28698 734 aaPredicted RBP4.46□□□□□ -1.7
PABPC1-211ENST00000519596 NLRP12P59046 1061 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 C19orf57Q0VDD7 668 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 COL19A1Q14993 1142 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 XKR5Q6UX68 686 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 KIAA1211Q6ZU35 1233 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 BEND4Q6ZU67 534 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 FAM20CQ8IXL6 584 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 C1orf127Q8N9H9 656 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 UBASH3BQ8TF42 649 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 CNTN3Q9P232 1028 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 SALL4Q9UJQ4 1053 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 HIF3AQ9Y2N7 669 aa4.46□□□□□ -1.7
PABPC1-211ENST00000519596 WDR64B1ANS9 1081 aa4.45□□□□□ -1.7
PABPC1-211ENST00000519596 TM4SF5O14894 197 aa4.45□□□□□ -1.7
PABPC1-211ENST00000519596 PHACTR2O75167 634 aa4.45□□□□□ -1.7
PABPC1-211ENST00000519596 PDGFAP04085 211 aa4.45□□□□□ -1.7
PABPC1-211ENST00000519596 RXRBP28702 533 aa4.45□□□□□ -1.7
PABPC1-211ENST00000519596 USP5P45974 858 aa4.45□□□□□ -1.7
PABPC1-211ENST00000519596 EHHADHQ08426 723 aa4.45□□□□□ -1.7
PABPC1-211ENST00000519596 ZNF648Q5T619 568 aaPredicted RBP4.45□□□□□ -1.7
PABPC1-211ENST00000519596 NUTM2GQ5VZR2 741 aa4.45□□□□□ -1.7
PABPC1-211ENST00000519596 FOXD4L4Q8WXT5 416 aaPredicted RBP4.45□□□□□ -1.7
PABPC1-211ENST00000519596 FAM83CQ9BQN1 747 aa4.45□□□□□ -1.7
PABPC1-211ENST00000519596 CYP4F12Q9HCS2 524 aa4.45□□□□□ -1.7
PABPC1-211ENST00000519596 DZANK1Q9NVP4 752 aa4.45□□□□□ -1.7
PABPC1-211ENST00000519596 ANGEL1Q9UNK9 670 aaKnown RBP4.45□□□□□ -1.7
PABPC1-211ENST00000519596 ADAM11O75078 769 aa4.44□□□□□ -1.7
PABPC1-211ENST00000519596 FAM13AO94988 1023 aa4.44□□□□□ -1.7
PABPC1-211ENST00000519596 EIF1AXP47813 144 aaKnown RBP4.44□□□□□ -1.7
PABPC1-211ENST00000519596 IKBKEQ14164 716 aa4.44□□□□□ -1.7
PABPC1-211ENST00000519596 ZNF124Q15973 351 aa4.44□□□□□ -1.7
PABPC1-211ENST00000519596 MSMPQ1L6U9 139 aa4.44□□□□□ -1.7
PABPC1-211ENST00000519596 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
PABPC1-211ENST00000519596 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.44□□□□□ -1.7
PABPC1-211ENST00000519596 TMEM102Q8N9M5 508 aaPredicted RBP4.44□□□□□ -1.7
PABPC1-211ENST00000519596 C12orf50Q8NA57 414 aaPredicted RBP4.44□□□□□ -1.7
PABPC1-211ENST00000519596 GTF3C2Q8WUA4 911 aaPredicted RBP4.44□□□□□ -1.7
PABPC1-211ENST00000519596 BSNDQ8WZ55 320 aa4.44□□□□□ -1.7
PABPC1-211ENST00000519596 OSMRQ99650 979 aa4.44□□□□□ -1.7
PABPC1-211ENST00000519596 ATG3Q9NT62 314 aa4.44□□□□□ -1.7
PABPC1-211ENST00000519596 PIM2Q9P1W9 311 aa4.44□□□□□ -1.7
PABPC1-211ENST00000519596 SLAIN2Q9P270 581 aa4.44□□□□□ -1.7
PABPC1-211ENST00000519596 CCDC39Q9UFE4 941 aa4.44□□□□□ -1.7
PABPC1-211ENST00000519596 CARNS1A5YM72 827 aa4.43□□□□□ -1.7
PABPC1-211ENST00000519596 MEGF11A6BM72 1044 aa4.43□□□□□ -1.7
PABPC1-211ENST00000519596 MPSTP25325 297 aa4.43□□□□□ -1.7
PABPC1-211ENST00000519596 USP11P51784 963 aa4.43□□□□□ -1.7
PABPC1-211ENST00000519596 ASAP3Q8TDY4 903 aa4.43□□□□□ -1.7
PABPC1-211ENST00000519596 SNX29Q8TEQ0 813 aa4.43□□□□□ -1.7
PABPC1-211ENST00000519596 MFSD14AQ96MC6 490 aa4.43□□□□□ -1.7
PABPC1-211ENST00000519596 ARID3AQ99856 593 aa4.43□□□□□ -1.7
PABPC1-211ENST00000519596 YIPF2Q9BWQ6 316 aa4.43□□□□□ -1.7
PABPC1-211ENST00000519596 USP26Q9BXU7 913 aa4.43□□□□□ -1.7
PABPC1-211ENST00000519596 GGNBP2Q9H3C7 697 aa4.43□□□□□ -1.7
PABPC1-211ENST00000519596 A6NHS1 94 aa4.42□□□□□ -1.7
PABPC1-211ENST00000519596 TRPA1O75762 1119 aa4.42□□□□□ -1.7
PABPC1-211ENST00000519596 PPP1R15AO75807 674 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-211ENST00000519596 ACPPP15309 386 aa4.42□□□□□ -1.7
PABPC1-211ENST00000519596 JUNBP17275 347 aaPredicted RBP4.42□□□□□ -1.7
PABPC1-211ENST00000519596 PREPP48147 710 aa4.42□□□□□ -1.7
PABPC1-211ENST00000519596 ADAMTSL4Q6UY14 1074 aa4.42□□□□□ -1.7
PABPC1-211ENST00000519596 NXPE3Q969Y0 559 aa4.42□□□□□ -1.7
PABPC1-211ENST00000519596 SOX13Q9UN79 622 aa4.42□□□□□ -1.7
PABPC1-211ENST00000519596 POLIQ9UNA4 740 aa4.42□□□□□ -1.7
PABPC1-211ENST00000519596 LEMD3Q9Y2U8 911 aa4.42□□□□□ -1.7
PABPC1-211ENST00000519596 DBX1A6NMT0 343 aa4.41□□□□□ -1.7
PABPC1-211ENST00000519596 NFKBIEO00221 500 aa4.41□□□□□ -1.7
PABPC1-211ENST00000519596 EREGO14944 169 aa4.41□□□□□ -1.7
PABPC1-211ENST00000519596 TNFRSF21O75509 655 aa4.41□□□□□ -1.7
PABPC1-211ENST00000519596 PRNPP04156 253 aa4.41□□□□□ -1.7
PABPC1-211ENST00000519596 MAP4P27816 1152 aaKnown RBP4.41□□□□□ -1.7
PABPC1-211ENST00000519596 SF3B2Q13435 895 aaKnown RBP4.41□□□□□ -1.7
PABPC1-211ENST00000519596 HP1BP3Q5SSJ5 553 aaPredicted RBP4.41□□□□□ -1.7
PABPC1-211ENST00000519596 PAOXQ6QHF9 649 aa4.41□□□□□ -1.7
PABPC1-211ENST00000519596 TP53INP2Q8IXH6 220 aa4.41□□□□□ -1.7
PABPC1-211ENST00000519596 DDX54Q8TDD1 881 aaKnown RBP4.41□□□□□ -1.7
PABPC1-211ENST00000519596 ZKSCAN3Q9BRR0 538 aa4.41□□□□□ -1.7
PABPC1-211ENST00000519596 OSBPL1AQ9BXW6 950 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms