RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 KCNJ4P48050 445 aa11.17□□□□□ -0.62
TRIM35-202ENST00000519219 LINS1Q8NG48 757 aa11.17□□□□□ -0.62
TRIM35-202ENST00000519219 DEFB129Q9H1M3 183 aa11.17□□□□□ -0.62
TRIM35-202ENST00000519219 SPINK5Q9NQ38 1064 aaPredicted RBP11.17□□□□□ -0.62
TRIM35-202ENST00000519219 KIAA0100Q14667 2235 aaKnown RBP11.17□□□□□ -0.62
TRIM35-202ENST00000519219 ANKRD18BA2A2Z9 1011 aa11.16□□□□□ -0.62
TRIM35-202ENST00000519219 VAMP4O75379 141 aa11.16□□□□□ -0.62
TRIM35-202ENST00000519219 GJA5P36382 358 aa11.16□□□□□ -0.62
TRIM35-202ENST00000519219 CAP1Q01518 475 aa11.16□□□□□ -0.62
TRIM35-202ENST00000519219 EXOSC9Q06265 439 aaKnown RBP11.16□□□□□ -0.62
TRIM35-202ENST00000519219 DLGAP5Q15398 846 aa11.16□□□□□ -0.62
TRIM35-202ENST00000519219 ARMC9Q7Z3E5 817 aa11.16□□□□□ -0.62
TRIM35-202ENST00000519219 CDAN1Q8IWY9 1227 aa11.16□□□□□ -0.62
TRIM35-202ENST00000519219 MYH16Q9H6N6 1097 aa11.16□□□□□ -0.62
TRIM35-202ENST00000519219 CHMP3Q9Y3E7 222 aa11.16□□□□□ -0.62
TRIM35-202ENST00000519219 ZSWIM8A7E2V4 1837 aa11.16□□□□□ -0.62
TRIM35-202ENST00000519219 IL16Q14005 1332 aa11.15□□□□□ -0.62
TRIM35-202ENST00000519219 COL1A1P02452 1464 aaPredicted RBP11.15□□□□□ -0.62
TRIM35-202ENST00000519219 IGF2BP3O00425 579 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRIM35-202ENST00000519219 PLIN1O60240 522 aa11.15□□□□□ -0.62
TRIM35-202ENST00000519219 SREBF2Q12772 1141 aa11.15□□□□□ -0.62
TRIM35-202ENST00000519219 CFAP100Q494V2 611 aa11.15□□□□□ -0.62
TRIM35-202ENST00000519219 BEND3Q5T5X7 828 aa11.15□□□□□ -0.62
TRIM35-202ENST00000519219 NBPF12Q5TAG4 269 aaPredicted RBP11.15□□□□□ -0.62
TRIM35-202ENST00000519219 LMBR1LQ6UX01 489 aa11.15□□□□□ -0.62
TRIM35-202ENST00000519219 C15orf52Q6ZUT6 534 aaKnown RBP11.15□□□□□ -0.62
TRIM35-202ENST00000519219 WNK4Q96J92 1243 aa11.15□□□□□ -0.62
TRIM35-202ENST00000519219 PRMT6Q96LA8 375 aaPredicted RBP11.15□□□□□ -0.62
TRIM35-202ENST00000519219 CHMP4AQ9BY43 222 aa11.15□□□□□ -0.62
TRIM35-202ENST00000519219 MKI67P46013 3256 aaKnown RBP11.14□□□□□ -0.63
TRIM35-202ENST00000519219 SPDYE2BA6NHP3 402 aa11.14□□□□□ -0.63
TRIM35-202ENST00000519219 FKTNO75072 461 aa11.14□□□□□ -0.63
TRIM35-202ENST00000519219 SPDYE6P0CI01 402 aa11.14□□□□□ -0.63
TRIM35-202ENST00000519219 IL1R1P14778 569 aa11.14□□□□□ -0.63
TRIM35-202ENST00000519219 IFIT5Q13325 482 aaKnown RBP11.14□□□□□ -0.63
TRIM35-202ENST00000519219 PKN2Q16513 984 aaKnown RBP11.14□□□□□ -0.63
TRIM35-202ENST00000519219 NOM1Q5C9Z4 860 aaKnown RBP11.14□□□□□ -0.63
TRIM35-202ENST00000519219 FBXO46Q6PJ61 603 aaPredicted RBP11.14□□□□□ -0.63
TRIM35-202ENST00000519219 IFNL1Q8IU54 200 aa11.14□□□□□ -0.63
TRIM35-202ENST00000519219 MTMR14Q8NCE2 650 aa11.14□□□□□ -0.63
TRIM35-202ENST00000519219 CFHR5Q9BXR6 569 aa11.14□□□□□ -0.63
TRIM35-202ENST00000519219 VEZTQ9HBM0 779 aa11.14□□□□□ -0.63
TRIM35-202ENST00000519219 RBBP6Q7Z6E9 1792 aaKnown RBP11.13□□□□□ -0.63
TRIM35-202ENST00000519219 CENPFP49454 3210 aa11.13□□□□□ -0.63
TRIM35-202ENST00000519219 GRIK5Q16478 980 aa11.13□□□□□ -0.63
TRIM35-202ENST00000519219 MAP3K11Q16584 847 aa11.13□□□□□ -0.63
TRIM35-202ENST00000519219 SLC10A4Q96EP9 437 aa11.13□□□□□ -0.63
TRIM35-202ENST00000519219 PUS3Q9BZE2 481 aaKnown RBP11.13□□□□□ -0.63
TRIM35-202ENST00000519219 POTEFA5A3E0 1075 aa11.12□□□□□ -0.63
TRIM35-202ENST00000519219 USP2O75604 605 aaPredicted RBP11.12□□□□□ -0.63
TRIM35-202ENST00000519219 GYG1P46976 350 aa11.12□□□□□ -0.63
TRIM35-202ENST00000519219 PRPF38BQ5VTL8 546 aaKnown RBP11.12□□□□□ -0.63
TRIM35-202ENST00000519219 OTOP1Q7RTM1 612 aa11.12□□□□□ -0.63
TRIM35-202ENST00000519219 ZNF804AQ7Z570 1209 aa11.12□□□□□ -0.63
TRIM35-202ENST00000519219 CNKSR2Q8WXI2 1034 aa11.12□□□□□ -0.63
TRIM35-202ENST00000519219 KAZALD1Q96I82 304 aa11.12□□□□□ -0.63
TRIM35-202ENST00000519219 PTPN18Q99952 460 aa11.12□□□□□ -0.63
TRIM35-202ENST00000519219 MRS2Q9HD23 443 aa11.12□□□□□ -0.63
TRIM35-202ENST00000519219 TRIM17Q9Y577 477 aa11.12□□□□□ -0.63
TRIM35-202ENST00000519219 MANSC4A6NHS7 340 aaPredicted RBP11.11□□□□□ -0.63
TRIM35-202ENST00000519219 GRM8O00222 908 aa11.11□□□□□ -0.63
TRIM35-202ENST00000519219 MMP14P50281 582 aa11.11□□□□□ -0.63
TRIM35-202ENST00000519219 RBM5P52756 815 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRIM35-202ENST00000519219 CRHR2Q13324 411 aa11.11□□□□□ -0.63
TRIM35-202ENST00000519219 RASA3Q14644 834 aa11.11□□□□□ -0.63
TRIM35-202ENST00000519219 LDHAL6AQ6ZMR3 332 aa11.11□□□□□ -0.63
TRIM35-202ENST00000519219 CD99L2Q8TCZ2 262 aa11.11□□□□□ -0.63
TRIM35-202ENST00000519219 SUCLG2Q96I99 432 aa11.11□□□□□ -0.63
TRIM35-202ENST00000519219 TDRD3Q9H7E2 651 aaKnown RBP11.11□□□□□ -0.63
TRIM35-202ENST00000519219 FAM205AQ6ZU69 1335 aa11.1□□□□□ -0.63
TRIM35-202ENST00000519219 MYH13Q9UKX3 1938 aa11.1□□□□□ -0.63
TRIM35-202ENST00000519219 PPP1R12BO60237 982 aaPredicted RBP11.1□□□□□ -0.63
TRIM35-202ENST00000519219 ZBTB48P10074 688 aaPredicted RBP11.1□□□□□ -0.63
TRIM35-202ENST00000519219 FKBP1AP62942 108 aaKnown RBP11.1□□□□□ -0.63
TRIM35-202ENST00000519219 SPDYE2Q495Y8 402 aa11.1□□□□□ -0.63
TRIM35-202ENST00000519219 TDRD7Q8NHU6 1098 aaKnown RBP11.1□□□□□ -0.63
TRIM35-202ENST00000519219 FAM84BQ96KN1 310 aaPredicted RBP11.1□□□□□ -0.63
TRIM35-202ENST00000519219 TEPSINQ96N21 525 aa11.1□□□□□ -0.63
TRIM35-202ENST00000519219 ELP3Q9H9T3 547 aa11.1□□□□□ -0.63
TRIM35-202ENST00000519219 CNNM1Q9NRU3 951 aa11.1□□□□□ -0.63
TRIM35-202ENST00000519219 ZNF70Q9UC06 446 aaPredicted RBP11.1□□□□□ -0.63
TRIM35-202ENST00000519219 IQSEC3Q9UPP2 1182 aaPredicted RBP11.1□□□□□ -0.63
TRIM35-202ENST00000519219 PPP2R3BQ9Y5P8 575 aa11.1□□□□□ -0.63
TRIM35-202ENST00000519219 TCP10L2B9ZVM9 353 aa11.09□□□□□ -0.63
TRIM35-202ENST00000519219 CCDC57Q2TAC2 916 aa11.09□□□□□ -0.63
TRIM35-202ENST00000519219 TAF7LQ5H9L4 462 aa11.09□□□□□ -0.63
TRIM35-202ENST00000519219 MFSD14BQ5SR56 506 aa11.09□□□□□ -0.63
TRIM35-202ENST00000519219 SLC4A10Q6U841 1118 aa11.09□□□□□ -0.63
TRIM35-202ENST00000519219 WDR63Q8IWG1 891 aa11.09□□□□□ -0.63
TRIM35-202ENST00000519219 TMEM39BQ9GZU3 492 aa11.09□□□□□ -0.63
TRIM35-202ENST00000519219 TTF2Q9UNY4 1162 aaKnown RBP11.09□□□□□ -0.63
TRIM35-202ENST00000519219 MYO1BO43795 1136 aa11.08□□□□□ -0.64
TRIM35-202ENST00000519219 ALDH1A1P00352 501 aa11.08□□□□□ -0.64
TRIM35-202ENST00000519219 NBPF7P0C2Y1 421 aaPredicted RBP11.08□□□□□ -0.64
TRIM35-202ENST00000519219 IREB2P48200 963 aaKnown RBP11.08□□□□□ -0.64
TRIM35-202ENST00000519219 CACNB3P54284 484 aa11.08□□□□□ -0.64
TRIM35-202ENST00000519219 SUPT20HL1Q3ZLR7 823 aa11.08□□□□□ -0.64
TRIM35-202ENST00000519219 LRRC24Q50LG9 513 aa11.08□□□□□ -0.64
TRIM35-202ENST00000519219 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.08□□□□□ -0.64
TRIM35-202ENST00000519219 DZIP1LQ8IYY4 767 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms