RNA–Protein interactions for RNA: ENST00000519207.5

SH2D4A-204, Transcript of SH2 domain containing 4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SH2D4A, Length 1,984 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-204ENST00000519207 GTF3C6Q969F1 213 aa11.87□□□□□ -0.51
SH2D4A-204ENST00000519207 DSCC1Q9BVC3 393 aa11.87□□□□□ -0.51
SH2D4A-204ENST00000519207 EYA2O00167 538 aa11.86□□□□□ -0.51
SH2D4A-204ENST00000519207 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.86□□□□□ -0.51
SH2D4A-204ENST00000519207 TCEANC2Q96MN5 208 aa11.86□□□□□ -0.51
SH2D4A-204ENST00000519207 PAG1Q9NWQ8 432 aa11.86□□□□□ -0.51
SH2D4A-204ENST00000519207 STK32BQ9NY57 414 aa11.86□□□□□ -0.51
SH2D4A-204ENST00000519207 CHMP3Q9Y3E7 222 aa11.86□□□□□ -0.51
SH2D4A-204ENST00000519207 CYP21A2P08686 494 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 DDX46Q7L014 1031 aaKnown RBP11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 KIF18AQ8NI77 898 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 KAT6BQ8WYB5 2073 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 TSPYL1Q9H0U9 437 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 USP25Q9UHP3 1055 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 FBXO3Q9UK99 471 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 SHANK3Q9BYB0 1731 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 KDM4AO75164 1064 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 A1BGP04217 495 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 CDK11BP21127 795 aaKnown RBP11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 ZMYM1Q5SVZ6 1142 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 CCDC129Q6ZRS4 1044 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 TTC6Q86TZ1 520 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 POTEDQ86YR6 584 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 NEUROD6Q96NK8 337 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 SEC62Q99442 399 aaKnown RBP11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 LLPHQ9BRT6 129 aaKnown RBP11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 CALCOCO1Q9P1Z2 691 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 PYCARDQ9ULZ3 195 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 ATF5Q9Y2D1 282 aaPredicted RBP11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 NDUFB9Q9Y6M9 179 aa11.85□□□□□ -0.51
SH2D4A-204ENST00000519207 HCLS1P14317 486 aaPredicted RBP11.84□□□□□ -0.51
SH2D4A-204ENST00000519207 PTGER2P43116 358 aa11.84□□□□□ -0.51
SH2D4A-204ENST00000519207 CHAF1AQ13111 956 aaPredicted RBP11.84□□□□□ -0.51
SH2D4A-204ENST00000519207 TRIM28Q13263 835 aaKnown RBP11.84□□□□□ -0.51
SH2D4A-204ENST00000519207 Q6ZUG5 572 aa11.84□□□□□ -0.51
SH2D4A-204ENST00000519207 ISCA1Q9BUE6 129 aa11.84□□□□□ -0.51
SH2D4A-204ENST00000519207 LAMA4Q16363 1823 aa11.84□□□□□ -0.51
SH2D4A-204ENST00000519207 CASZ1Q86V15 1759 aa11.84□□□□□ -0.51
SH2D4A-204ENST00000519207 SMTNL1A8MU46 457 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 GOLIM4O00461 696 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 CCDC192P0DO97 292 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 TIMM10P62072 90 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 GIMAP6Q6P9H5 292 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 DHX32Q7L7V1 743 aaKnown RBP11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 TEX2Q8IWB9 1127 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 AGXT2Q9BYV1 514 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 NHSQ6T4R5 1651 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 PFKFB2O60825 505 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 STK3Q13188 491 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 TCIRG1Q13488 830 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 LRRFIP1Q32MZ4 808 aaKnown RBP11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 FERMT3Q86UX7 667 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 CHMP4CQ96CF2 233 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 TEX13AQ9BXU3 409 aaPredicted RBP11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 ZSCAN16Q9H4T2 348 aaPredicted RBP11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 ZBTB3Q9H5J0 574 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 LRRC4BQ9NT99 713 aa11.83□□□□□ -0.52
SH2D4A-204ENST00000519207 A0A1B0GUL7 405 aa11.82□□□□□ -0.52
SH2D4A-204ENST00000519207 RNF113AO15541 343 aaKnown RBP11.82□□□□□ -0.52
SH2D4A-204ENST00000519207 DTNBO60941 627 aa11.82□□□□□ -0.52
SH2D4A-204ENST00000519207 IFIT1P09914 478 aaKnown RBP11.82□□□□□ -0.52
SH2D4A-204ENST00000519207 LRRC24Q50LG9 513 aa11.82□□□□□ -0.52
SH2D4A-204ENST00000519207 SMARCC2Q8TAQ2 1214 aa11.82□□□□□ -0.52
SH2D4A-204ENST00000519207 SPATA32Q96LK8 384 aa11.82□□□□□ -0.52
SH2D4A-204ENST00000519207 PLA2G12BQ9BX93 195 aa11.82□□□□□ -0.52
SH2D4A-204ENST00000519207 CEP126Q9P2H0 1117 aa11.82□□□□□ -0.52
SH2D4A-204ENST00000519207 AKAP2Q9Y2D5 859 aa11.82□□□□□ -0.52
SH2D4A-204ENST00000519207 CHGBP05060 677 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 HSP90B1P14625 803 aaKnown RBP11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 EXOSC10Q01780 885 aaKnown RBP11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 MAP3K11Q16584 847 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 STOX1Q6ZVD7 989 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 KRT222Q8N1A0 295 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 LEO1Q8WVC0 666 aaPredicted RBP11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 NUP62CLQ9H1M0 184 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 YY1AP1Q9H869 796 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 DDX19AQ9NUU7 478 aaKnown RBP11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 GOLGA6L4A6NEF3 574 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 AP5Z1O43299 807 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 JAK2O60674 1132 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 HSPD1P10809 573 aaKnown RBP11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 YY1P25490 414 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 SCRN1Q12765 414 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 RESTQ13127 1097 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 CCDC57Q2TAC2 916 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 FBXL16Q8N461 479 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 RGS22Q8NE09 1264 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 BRF1Q92994 677 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 MTFR1LQ9H019 292 aa11.81□□□□□ -0.52
SH2D4A-204ENST00000519207 ABCC12Q96J65 1359 aa11.8□□□□□ -0.52
SH2D4A-204ENST00000519207 BTAF1O14981 1849 aa11.8□□□□□ -0.52
SH2D4A-204ENST00000519207 H3BQV1 296 aa11.8□□□□□ -0.52
SH2D4A-204ENST00000519207 PCCAP05165 728 aaPredicted RBP11.8□□□□□ -0.52
SH2D4A-204ENST00000519207 ZFYP08048 801 aaPredicted RBP11.8□□□□□ -0.52
SH2D4A-204ENST00000519207 ZNF827Q17R98 1081 aa11.8□□□□□ -0.52
SH2D4A-204ENST00000519207 SLFNL1Q499Z3 407 aa11.8□□□□□ -0.52
SH2D4A-204ENST00000519207 TPRNQ4KMQ1 711 aa11.8□□□□□ -0.52
SH2D4A-204ENST00000519207 IFFO2Q5TF58 517 aa11.8□□□□□ -0.52
SH2D4A-204ENST00000519207 NAA16Q6N069 864 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms