RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 REXO1Q8N1G1 1221 aaKnown RBP2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 TTC16Q8NEE8 873 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 OSMRQ99650 979 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 OXCT2Q9BYC2 517 aaPredicted RBP2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 SRCAPQ6ZRS2 3230 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 ERCC6L2Q5T890 1561 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 PHF20L1A8MW92 1017 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 TARSP26639 723 aaKnown RBP2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 IRS1P35568 1242 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 ZNF76P36508 570 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 RBM25P49756 843 aaKnown RBP2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 SF3A1Q15459 793 aaKnown RBP2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 PERM1Q5SV97 790 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 NBPF6Q5VWK0 638 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 FBXO11Q86XK2 927 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 PHC3Q8NDX5 983 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 ZNF428Q96B54 188 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 BTBD6Q96KE9 485 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 NBPF4Q96M43 638 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 POP1Q99575 1024 aaKnown RBP2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 EHD4Q9H223 541 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 SEC31BQ9NQW1 1179 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 FAM221AA4D161 298 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 MEIS3P2A8K0S8 358 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 SMNDC1O75940 238 aaKnown RBP eCLIP2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 USP17L7P0C7H9 530 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 BMP4P12644 408 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 RANGAP1P46060 587 aaPredicted RBP2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 ZNF385CQ66K41 422 aaPredicted RBP2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 GPAMQ9HCL2 828 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 RNF19AQ9NV58 838 aa2.81□□□□□ -1.96
AC025539.1-201ENST00000515343 ENC1O14682 589 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 WFS1O76024 890 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 MX2P20592 715 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 ADH7P40394 386 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 GRIA4P48058 902 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 KIF4BQ2VIQ3 1234 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 RNFT1Q5M7Z0 435 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 SOGA3Q5TF21 947 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 HS2ST1Q7LGA3 356 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 COL25A1Q9BXS0 654 aaPredicted RBP2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 NAGPAQ9UK23 515 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 ESRRAP11474 423 aaPredicted RBP2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 PTPRAP18433 802 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 C8orf34Q49A92 452 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 C1orf229Q6ZS94 237 aaPredicted RBP2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 TMEM130Q8N3G9 435 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 PCDHGC5Q9Y5F6 944 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 CADPSQ9ULU8 1353 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 A6NHS1 94 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 H3BRJ5 948 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 PIK3R2O00459 728 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 CILPO75339 1184 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 CELA2BP08218 269 aaPredicted RBP2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 ALAS2P22557 587 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 MAPK8P45983 427 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 FAAP100Q0VG06 881 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 GRIN2CQ14957 1233 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 LRRC14Q15048 493 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 RIPOR1Q6ZS17 1223 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 RBSNQ9H1K0 784 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 RASSF4Q9H2L5 321 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 SUGCTQ9HAC7 445 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 ADAM30Q9UKF2 790 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 SNCAIPQ9Y6H5 919 aa2.8□□□□□ -1.96
AC025539.1-201ENST00000515343 DCDC2BA2VCK2 349 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 ARNTP27540 789 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 RACK1P63244 317 aaKnown RBP2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 TMEM201Q5SNT2 666 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 KLHL23Q8NBE8 558 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 PNMA5Q96PV4 448 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 CLEC4MQ9H2X3 399 aaPredicted RBP2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 MRS2Q9HD23 443 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 GGA1Q9UJY5 639 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 USP20Q9Y2K6 914 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 FGRP09769 529 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 AFF1P51825 1210 aaKnown RBP2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 MSL1Q68DK7 614 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 NXPE4Q6UWF7 544 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 ADAMTSL4Q6UY14 1074 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 CHSY3Q70JA7 882 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 C19orf47Q8N9M1 422 aaKnown RBP2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 SAMM50Q9Y512 469 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 MPP2Q14168 576 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 ZNF423Q2M1K9 1284 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 TRIM42Q8IWZ5 723 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 DDX54Q8TDD1 881 aaKnown RBP2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 BHMTQ93088 406 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 LATS2Q9NRM7 1088 aa2.79□□□□□ -1.96
AC025539.1-201ENST00000515343 GFRA2O00451 464 aa2.78□□□□□ -1.96
AC025539.1-201ENST00000515343 DLL1O00548 723 aa2.78□□□□□ -1.96
AC025539.1-201ENST00000515343 LIG3P49916 1009 aa2.78□□□□□ -1.96
AC025539.1-201ENST00000515343 SUZ12Q15022 739 aaKnown RBP2.78□□□□□ -1.96
AC025539.1-201ENST00000515343 HP1BP3Q5SSJ5 553 aaPredicted RBP2.78□□□□□ -1.96
AC025539.1-201ENST00000515343 TMC1Q8TDI8 760 aa2.78□□□□□ -1.96
AC025539.1-201ENST00000515343 SREK1Q8WXA9 508 aaKnown RBP2.78□□□□□ -1.96
AC025539.1-201ENST00000515343 TMEM39AQ9NV64 488 aa2.78□□□□□ -1.96
AC025539.1-201ENST00000515343 VTI1BQ9UEU0 232 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms