RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 KIF1BPQ96EK5 621 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 VPS33BQ9H267 617 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 DCTPP1Q9H773 170 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 POLLQ9UGP5 575 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 AKAP2Q9Y2D5 859 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 MYH2Q9UKX2 1941 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 COL4A5P29400 1685 aa9.36□□□□□ -0.91
HMGXB3-204ENST00000513318 SCN4AP35499 1836 aa9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 MAST2Q6P0Q8 1798 aa9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 UTRNP46939 3433 aa9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 IFIT1P09914 478 aaKnown RBP9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 SLC5A1P13866 664 aa9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 PLCG2P16885 1265 aa9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 IARSP41252 1262 aaKnown RBP9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 TFCP2Q12800 502 aa9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 ATP2B3Q16720 1220 aa9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 DPY19L2Q6NUT2 758 aa9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 C15orf52Q6ZUT6 534 aaKnown RBP9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 RHPN1Q8TCX5 695 aa9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 GPR108Q9NPR9 543 aa9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.35□□□□□ -0.91
HMGXB3-204ENST00000513318 IRS2Q9Y4H2 1338 aa9.34□□□□□ -0.91
HMGXB3-204ENST00000513318 PPIP5K2O43314 1243 aa9.34□□□□□ -0.91
HMGXB3-204ENST00000513318 LMNB1P20700 586 aa9.34□□□□□ -0.91
HMGXB3-204ENST00000513318 FGFR2P21802 821 aa9.34□□□□□ -0.91
HMGXB3-204ENST00000513318 KIAA2012Q0VF49 1180 aa9.34□□□□□ -0.91
HMGXB3-204ENST00000513318 AOC3Q16853 763 aa9.34□□□□□ -0.91
HMGXB3-204ENST00000513318 WASHC4Q2M389 1173 aa9.34□□□□□ -0.91
HMGXB3-204ENST00000513318 SMC5Q8IY18 1101 aa9.34□□□□□ -0.91
HMGXB3-204ENST00000513318 CLASRPQ8N2M8 674 aaKnown RBP9.34□□□□□ -0.91
HMGXB3-204ENST00000513318 LPIN2Q92539 896 aa9.34□□□□□ -0.91
HMGXB3-204ENST00000513318 LRRCC1Q9C099 1032 aa9.34□□□□□ -0.91
HMGXB3-204ENST00000513318 ZNF277Q9NRM2 450 aaPredicted RBP9.34□□□□□ -0.91
HMGXB3-204ENST00000513318 A0A1B0GUL7 405 aa9.33□□□□□ -0.92
HMGXB3-204ENST00000513318 SNAP23O00161 211 aa9.33□□□□□ -0.92
HMGXB3-204ENST00000513318 APBB1O00213 710 aa9.33□□□□□ -0.92
HMGXB3-204ENST00000513318 IGHDP01880 384 aa9.33□□□□□ -0.92
HMGXB3-204ENST00000513318 TNNI3KQ59H18 835 aa9.33□□□□□ -0.92
HMGXB3-204ENST00000513318 ZNF804AQ7Z570 1209 aa9.33□□□□□ -0.92
HMGXB3-204ENST00000513318 LARGE2Q8N3Y3 721 aa9.33□□□□□ -0.92
HMGXB3-204ENST00000513318 GPR101Q96P66 508 aaPredicted RBP9.33□□□□□ -0.92
HMGXB3-204ENST00000513318 ZC3H12CQ9C0D7 883 aaKnown RBP9.33□□□□□ -0.92
HMGXB3-204ENST00000513318 FPGT-TNNI3KV9GXZ4 949 aa9.33□□□□□ -0.92
HMGXB3-204ENST00000513318 ZC3H4Q9UPT8 1303 aaKnown RBP9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 WTIPA6NIX2 430 aaPredicted RBP9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 PPP1R37O75864 691 aa9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 KLRK1P26718 216 aa9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 CAVIN4Q5BKX8 364 aa9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 NIM1KQ8IY84 436 aa9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 JDP2Q8WYK2 163 aa9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 CCDC136Q96JN2 1154 aa9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 COA1Q9GZY4 146 aa9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 IL1RAPL2Q9NP60 686 aa9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 RNF181Q9P0P0 153 aa9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 CDK5RAP2Q96SN8 1893 aa9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 POLR2AP24928 1970 aaKnown RBP9.32□□□□□ -0.92
HMGXB3-204ENST00000513318 WDR90Q96KV7 1748 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 G3V3G9 751 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 POTEB2H3BUK9 544 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 RIMBP2O15034 1052 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 PRELPP51888 382 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 TIMM10P62072 90 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 PAXIP1Q6ZW49 1069 aaPredicted RBP9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 CENPQQ7L2Z9 268 aaPredicted RBP9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 PODNQ7Z5L7 613 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 AACSQ86V21 672 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 TXNRD3Q86VQ6 643 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 VPS37DQ86XT2 251 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 SPRYD3Q8NCJ5 442 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 EAF2Q96CJ1 260 aaPredicted RBP9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 XAGE2Q96GT9 111 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 NEUROD6Q96NK8 337 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 PPP4R2Q9NY27 417 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 KDM2BQ8NHM5 1336 aa9.31□□□□□ -0.92
HMGXB3-204ENST00000513318 ADAMTSL1Q8N6G6 1762 aa9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 SMARCA5O60264 1052 aaPredicted RBP9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 ECE2O60344 883 aa9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 IFIT2P09913 472 aaKnown RBP9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 ADORA1P30542 326 aa9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 HIBADHP31937 336 aaKnown RBP9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 GYG1P46976 350 aa9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 GORABQ5T7V8 394 aa9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 ANKRD45Q5TZF3 282 aa9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 C9orf131Q5VYM1 1079 aa9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 FBXO33Q7Z6M2 555 aa9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 FAM84BQ96KN1 310 aaPredicted RBP9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 DBNDD1Q9H9R9 158 aa9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 CD209Q9NNX6 404 aa9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 GNL3LQ9NVN8 582 aaKnown RBP9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 DBNLQ9UJU6 430 aaKnown RBP9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 ZNRF3Q9ULT6 936 aa9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 FOCADQ5VW36 1801 aa9.3□□□□□ -0.92
HMGXB3-204ENST00000513318 YDJCA8MPS7 323 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 FZD9O00144 591 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 SEMA3EO15041 775 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 POTEJP0CG39 1038 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 IL1R1P14778 569 aa9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 ARID4AP29374 1257 aaPredicted RBP9.29□□□□□ -0.92
HMGXB3-204ENST00000513318 PHKA1P46020 1223 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms