RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 COL1A1P02452 1464 aaPredicted RBP20.47■□□□□ 0.87
DDR1-269ENST00000512725 STK31Q9BXU1 1019 aa20.46■□□□□ 0.87
DDR1-269ENST00000512725 CD209Q9NNX6 404 aa20.46■□□□□ 0.87
DDR1-269ENST00000512725 NEURL1BA8MQ27 555 aa20.45■□□□□ 0.86
DDR1-269ENST00000512725 SP3Q02447 781 aa20.45■□□□□ 0.86
DDR1-269ENST00000512725 CHRNDQ07001 517 aa20.45■□□□□ 0.86
DDR1-269ENST00000512725 DDX10Q13206 875 aaKnown RBP20.45■□□□□ 0.86
DDR1-269ENST00000512725 MAP3K11Q16584 847 aa20.45■□□□□ 0.86
DDR1-269ENST00000512725 CFAP100Q494V2 611 aa20.45■□□□□ 0.86
DDR1-269ENST00000512725 NBPF12Q5TAG4 269 aaPredicted RBP20.45■□□□□ 0.86
DDR1-269ENST00000512725 JAG2Q9Y219 1238 aa20.45■□□□□ 0.86
DDR1-269ENST00000512725 PPP2R3BQ9Y5P8 575 aa20.45■□□□□ 0.86
DDR1-269ENST00000512725 SNAP23O00161 211 aa20.44■□□□□ 0.86
DDR1-269ENST00000512725 MYCP01106 439 aaPredicted RBP20.44■□□□□ 0.86
DDR1-269ENST00000512725 CERS5Q8N5B7 392 aa20.44■□□□□ 0.86
DDR1-269ENST00000512725 TSPYL6Q8N831 410 aa20.44■□□□□ 0.86
DDR1-269ENST00000512725 HELBQ8NG08 1087 aaPredicted RBP20.44■□□□□ 0.86
DDR1-269ENST00000512725 SSC5DA1L4H1 1573 aa20.43■□□□□ 0.86
DDR1-269ENST00000512725 TAF5LO75529 589 aa20.43■□□□□ 0.86
DDR1-269ENST00000512725 GJA5P36382 358 aa20.43■□□□□ 0.86
DDR1-269ENST00000512725 SLC4A8Q2Y0W8 1093 aa20.43■□□□□ 0.86
DDR1-269ENST00000512725 ELP3Q9H9T3 547 aa20.43■□□□□ 0.86
DDR1-269ENST00000512725 CHMP3Q9Y3E7 222 aa20.43■□□□□ 0.86
DDR1-269ENST00000512725 KIAA0100Q14667 2235 aaKnown RBP20.43■□□□□ 0.86
DDR1-269ENST00000512725 H7C1W4 665 aa20.42■□□□□ 0.86
DDR1-269ENST00000512725 ANKRD13AQ8IZ07 590 aa20.42■□□□□ 0.86
DDR1-269ENST00000512725 BRCA2P51587 3418 aa20.41■□□□□ 0.86
DDR1-269ENST00000512725 USP2O75604 605 aaPredicted RBP20.41■□□□□ 0.86
DDR1-269ENST00000512725 FXR1P51114 621 aaKnown RBP eCLIP20.41■□□□□ 0.86
DDR1-269ENST00000512725 RASA3Q14644 834 aa20.41■□□□□ 0.86
DDR1-269ENST00000512725 SLC9C1Q4G0N8 1177 aa20.41■□□□□ 0.86
DDR1-269ENST00000512725 ZNF804AQ7Z570 1209 aa20.41■□□□□ 0.86
DDR1-269ENST00000512725 NBPF11Q86T75 865 aa20.41■□□□□ 0.86
DDR1-269ENST00000512725 MTMR14Q8NCE2 650 aa20.41■□□□□ 0.86
DDR1-269ENST00000512725 ARMC5Q96C12 935 aa20.41■□□□□ 0.86
DDR1-269ENST00000512725 OPTNQ96CV9 577 aa20.41■□□□□ 0.86
DDR1-269ENST00000512725 PRMT6Q96LA8 375 aaPredicted RBP20.41■□□□□ 0.86
DDR1-269ENST00000512725 ECM29Q5VYK3 1845 aa20.41■□□□□ 0.86
DDR1-269ENST00000512725 ANKRD18BA2A2Z9 1011 aa20.4■□□□□ 0.86
DDR1-269ENST00000512725 SPDYE2BA6NHP3 402 aa20.4■□□□□ 0.86
DDR1-269ENST00000512725 PLIN1O60240 522 aa20.4■□□□□ 0.86
DDR1-269ENST00000512725 SPDYE6P0CI01 402 aa20.4■□□□□ 0.86
DDR1-269ENST00000512725 PTPN18Q99952 460 aa20.4■□□□□ 0.86
DDR1-269ENST00000512725 RBBP6Q7Z6E9 1792 aaKnown RBP20.39■□□□□ 0.86
DDR1-269ENST00000512725 AOX1Q06278 1338 aa20.39■□□□□ 0.85
DDR1-269ENST00000512725 UNCXA6NJT0 531 aa20.39■□□□□ 0.85
DDR1-269ENST00000512725 ARHGEF6Q15052 776 aa20.39■□□□□ 0.85
DDR1-269ENST00000512725 TAF1CQ15572 869 aaPredicted RBP20.39■□□□□ 0.85
DDR1-269ENST00000512725 G2E3Q7L622 706 aa20.39■□□□□ 0.85
DDR1-269ENST00000512725 TSR2Q969E8 191 aaKnown RBP20.39■□□□□ 0.85
DDR1-269ENST00000512725 COLQQ9Y215 455 aaPredicted RBP20.39■□□□□ 0.85
DDR1-269ENST00000512725 SLC4A2P04920 1241 aa20.38■□□□□ 0.85
DDR1-269ENST00000512725 CAP1Q01518 475 aa20.38■□□□□ 0.85
DDR1-269ENST00000512725 GCKRQ14397 625 aa20.38■□□□□ 0.85
DDR1-269ENST00000512725 PLA2G12BQ9BX93 195 aa20.38■□□□□ 0.85
DDR1-269ENST00000512725 MYH16Q9H6N6 1097 aa20.38■□□□□ 0.85
DDR1-269ENST00000512725 ZFYVE28Q9HCC9 887 aa20.38■□□□□ 0.85
DDR1-269ENST00000512725 PTCH2Q9Y6C5 1203 aa20.38■□□□□ 0.85
DDR1-269ENST00000512725 ZNF333Q96JL9 665 aa20.37■□□□□ 0.85
DDR1-269ENST00000512725 CCL15-CCL14A0A0B4J2E2 113 aa20.36■□□□□ 0.85
DDR1-269ENST00000512725 ECM2O94769 699 aaPredicted RBP20.36■□□□□ 0.85
DDR1-269ENST00000512725 CSF1RP07333 972 aa20.36■□□□□ 0.85
DDR1-269ENST00000512725 IFIT5Q13325 482 aaKnown RBP20.36■□□□□ 0.85
DDR1-269ENST00000512725 TNFAIP1Q13829 316 aa20.36■□□□□ 0.85
DDR1-269ENST00000512725 CCL15Q16663 113 aa20.36■□□□□ 0.85
DDR1-269ENST00000512725 CNKSR2Q8WXI2 1034 aa20.36■□□□□ 0.85
DDR1-269ENST00000512725 IL1R1P14778 569 aa20.35■□□□□ 0.85
DDR1-269ENST00000512725 FKBP5Q13451 457 aaPredicted RBP20.35■□□□□ 0.85
DDR1-269ENST00000512725 TAF7LQ5H9L4 462 aa20.35■□□□□ 0.85
DDR1-269ENST00000512725 TDRD3Q9H7E2 651 aaKnown RBP20.35■□□□□ 0.85
DDR1-269ENST00000512725 ZNF70Q9UC06 446 aaPredicted RBP20.35■□□□□ 0.85
DDR1-269ENST00000512725 LAMB1P07942 1786 aa20.34■□□□□ 0.85
DDR1-269ENST00000512725 TESPA1A2RU30 521 aaPredicted RBP20.34■□□□□ 0.85
DDR1-269ENST00000512725 TCP10L2B9ZVM9 353 aa20.34■□□□□ 0.85
DDR1-269ENST00000512725 TWISTNBQ3B726 338 aaPredicted RBP20.34■□□□□ 0.85
DDR1-269ENST00000512725 BRI3BPQ8WY22 251 aa20.34■□□□□ 0.85
DDR1-269ENST00000512725 WDHD1O75717 1129 aaPredicted RBP20.33■□□□□ 0.85
DDR1-269ENST00000512725 GTF2A2P52657 109 aa20.33■□□□□ 0.85
DDR1-269ENST00000512725 CASP7P55210 303 aa20.33■□□□□ 0.85
DDR1-269ENST00000512725 FLIIQ13045 1269 aa20.33■□□□□ 0.85
DDR1-269ENST00000512725 KIF22Q14807 665 aa20.33■□□□□ 0.85
DDR1-269ENST00000512725 SH3TC2Q8TF17 1288 aa20.33■□□□□ 0.85
DDR1-269ENST00000512725 DNAAF4Q8WXU2 420 aa20.33■□□□□ 0.85
DDR1-269ENST00000512725 OTUD5Q96G74 571 aa20.33■□□□□ 0.85
DDR1-269ENST00000512725 MS4A4AQ96JQ5 239 aa20.33■□□□□ 0.85
DDR1-269ENST00000512725 TTF2Q9UNY4 1162 aaKnown RBP20.33■□□□□ 0.85
DDR1-269ENST00000512725 CSADQ9Y600 493 aa20.33■□□□□ 0.85
DDR1-269ENST00000512725 OTOFQ9HC10 1997 aa20.33■□□□□ 0.84
DDR1-269ENST00000512725 H0YGN5 161 aa20.32■□□□□ 0.84
DDR1-269ENST00000512725 FKBP1AP62942 108 aaKnown RBP20.32■□□□□ 0.84
DDR1-269ENST00000512725 C15orf52Q6ZUT6 534 aaKnown RBP20.32■□□□□ 0.84
DDR1-269ENST00000512725 CNNM1Q9NRU3 951 aa20.32■□□□□ 0.84
DDR1-269ENST00000512725 IRS2Q9Y4H2 1338 aa20.31■□□□□ 0.84
DDR1-269ENST00000512725 MAP3K9P80192 1104 aa20.31■□□□□ 0.84
DDR1-269ENST00000512725 VGLL4Q14135 290 aa20.31■□□□□ 0.84
DDR1-269ENST00000512725 SPDYE2Q495Y8 402 aa20.31■□□□□ 0.84
DDR1-269ENST00000512725 MFSD14BQ5SR56 506 aa20.31■□□□□ 0.84
DDR1-269ENST00000512725 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.31■□□□□ 0.84
DDR1-269ENST00000512725 CDAN1Q8IWY9 1227 aa20.31■□□□□ 0.84
DDR1-269ENST00000512725 FAM43AQ8N2R8 423 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms