RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-208ENST00000512064 MPSTP25325 297 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 MAP2K2P36507 400 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 USP5P45974 858 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 EIF1AXP47813 144 aaKnown RBP4.8□□□□□ -1.64
GYPA-208ENST00000512064 RIPK4P57078 832 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 POU5F1Q01860 360 aaKnown RBP4.8□□□□□ -1.64
GYPA-208ENST00000512064 MTMR3Q13615 1198 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 DCTN1Q14203 1278 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 DSC3Q14574 896 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 RBBP5Q15291 538 aaKnown RBP4.8□□□□□ -1.64
GYPA-208ENST00000512064 RTN1Q16799 776 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 ZC3H12AQ5D1E8 599 aaKnown RBP4.8□□□□□ -1.64
GYPA-208ENST00000512064 MUM1L1Q5H9M0 696 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 COX20Q5RI15 118 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 ZNF385CQ66K41 422 aaPredicted RBP4.8□□□□□ -1.64
GYPA-208ENST00000512064 WWC2Q6AWC2 1192 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 PRICKLE2Q7Z3G6 844 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 TMC7Q7Z402 723 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 CATIPQ7Z7H3 387 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 LCA5Q86VQ0 697 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 EFCAB13Q8IY85 973 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 CCDC191Q8NCU4 936 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 PNISRQ8TF01 805 aaKnown RBP4.8□□□□□ -1.64
GYPA-208ENST00000512064 STAG1Q8WVM7 1258 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 CNTNAP3BQ96NU0 1288 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 UTP14AQ9BVJ6 771 aaKnown RBP4.8□□□□□ -1.64
GYPA-208ENST00000512064 CNTNAP3Q9BZ76 1288 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 QTRT2Q9H974 415 aaKnown RBP4.8□□□□□ -1.64
GYPA-208ENST00000512064 NOL7Q9UMY1 257 aaKnown RBP4.8□□□□□ -1.64
GYPA-208ENST00000512064 GPC6Q9Y625 555 aaPredicted RBP4.8□□□□□ -1.64
GYPA-208ENST00000512064 UNC13AQ9UPW8 1703 aa4.8□□□□□ -1.64
GYPA-208ENST00000512064 WRNQ14191 1432 aaPredicted RBP eCLIP4.8□□□□□ -1.64
GYPA-208ENST00000512064 SERTM1A2A2V5 107 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 ANKRD62A6NC57 917 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 GOLGA6L10A6NI86 522 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 GOLGA6L19H0YKK7 550 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 K7ELQ4 463 aaPredicted RBP4.79□□□□□ -1.64
GYPA-208ENST00000512064 EML1O00423 815 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 EPB41L2O43491 1005 aaKnown RBP4.79□□□□□ -1.64
GYPA-208ENST00000512064 FZD6O60353 706 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 CDKL5O76039 1030 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 REC8O95072 547 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 YY1P25490 414 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 GPC1P35052 558 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 ICA1Q05084 483 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 MRPL58Q14197 206 aaKnown RBP4.79□□□□□ -1.64
GYPA-208ENST00000512064 NAA30Q147X3 362 aaPredicted RBP4.79□□□□□ -1.64
GYPA-208ENST00000512064 TLR1Q15399 786 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 ZRSR1Q15695 479 aaKnown RBP4.79□□□□□ -1.64
GYPA-208ENST00000512064 ZSCAN26Q16670 478 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 CT47A1Q5JQC4 288 aaPredicted RBP4.79□□□□□ -1.64
GYPA-208ENST00000512064 SLC27A3Q5K4L6 730 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 ZFYVE27Q5T4F4 411 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 C1orf53Q5VUE5 145 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 LYSMD3Q7Z3D4 306 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 SDCCAG8Q86SQ7 713 aaPredicted RBP4.79□□□□□ -1.64
GYPA-208ENST00000512064 SMC5Q8IY18 1101 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 RPUSD2Q8IZ73 545 aaKnown RBP4.79□□□□□ -1.64
GYPA-208ENST00000512064 NGEFQ8N5V2 710 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 CCDC155Q8N6L0 562 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 PMFBP1Q8TBY8 1022 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 C17orf50Q8WW18 174 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 CNKSR1Q969H4 720 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 CDK5RAP3Q96JB5 506 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 NLRP3Q96P20 1036 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 AGAP3Q96P47 875 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 SPOCK3Q9BQ16 436 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 FHDC1Q9C0D6 1143 aaPredicted RBP4.79□□□□□ -1.64
GYPA-208ENST00000512064 SAP130Q9H0E3 1048 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 ARHGEF10LQ9HCE6 1279 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 RAB6BQ9NRW1 208 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 CPSF2Q9P2I0 782 aaKnown RBP4.79□□□□□ -1.64
GYPA-208ENST00000512064 RSPH14Q9UHP6 348 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 SERTAD1Q9UHV2 236 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 JRKLQ9Y4A0 524 aa4.79□□□□□ -1.64
GYPA-208ENST00000512064 NCAPD3P42695 1498 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 SLC35F4A4IF30 521 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 IPO5O00410 1097 aaKnown RBP4.78□□□□□ -1.64
GYPA-208ENST00000512064 PRPF40AO75400 957 aaKnown RBP4.78□□□□□ -1.64
GYPA-208ENST00000512064 ARHGEF15O94989 841 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 RECKO95980 971 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 P4HBP07237 508 aaKnown RBP4.78□□□□□ -1.64
GYPA-208ENST00000512064 TPM1P09493 284 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 NBPF7P0C2Y1 421 aaPredicted RBP4.78□□□□□ -1.64
GYPA-208ENST00000512064 CCDC159P0C7I6 412 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 RHOQP17081 205 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 NF2P35240 595 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 PRPHP41219 470 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 NOP2P46087 812 aaKnown RBP4.78□□□□□ -1.64
GYPA-208ENST00000512064 RNF144AP50876 292 aaPredicted RBP4.78□□□□□ -1.64
GYPA-208ENST00000512064 HDLBPQ00341 1268 aaKnown RBP4.78□□□□□ -1.64
GYPA-208ENST00000512064 KRT76Q01546 638 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 SFSWAPQ12872 951 aaKnown RBP4.78□□□□□ -1.64
GYPA-208ENST00000512064 HIF1AQ16665 826 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 PLA2G4EQ3MJ16 856 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 SEPT14Q6ZU15 432 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 KIAA1328Q86T90 577 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 TAX1BP1Q86VP1 789 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 GJD3Q8N144 294 aa4.78□□□□□ -1.64
GYPA-208ENST00000512064 KRT222Q8N1A0 295 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms