RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 PSME4Q14997 1843 aa20.09■□□□□ 0.81
PDLIM5-216ENST00000511767 WNT10BO00744 389 aa20.09■□□□□ 0.81
PDLIM5-216ENST00000511767 IFIT1P09914 478 aaKnown RBP20.09■□□□□ 0.81
PDLIM5-216ENST00000511767 ATP8B2P98198 1209 aa20.09■□□□□ 0.81
PDLIM5-216ENST00000511767 DEFB115Q30KQ5 88 aa20.09■□□□□ 0.81
PDLIM5-216ENST00000511767 CAVIN4Q5BKX8 364 aa20.09■□□□□ 0.81
PDLIM5-216ENST00000511767 FTSJ3Q8IY81 847 aaKnown RBP20.09■□□□□ 0.81
PDLIM5-216ENST00000511767 PANK1Q8TE04 598 aa20.09■□□□□ 0.81
PDLIM5-216ENST00000511767 PNMA6EA0A0J9YXQ4 647 aa20.08■□□□□ 0.81
PDLIM5-216ENST00000511767 RASSF10A6NK89 507 aa20.08■□□□□ 0.81
PDLIM5-216ENST00000511767 CELF2O95319 508 aaKnown RBP20.08■□□□□ 0.81
PDLIM5-216ENST00000511767 ANGEL2Q5VTE6 544 aaKnown RBP20.08■□□□□ 0.81
PDLIM5-216ENST00000511767 RCAN3Q9UKA8 241 aa20.08■□□□□ 0.81
PDLIM5-216ENST00000511767 HDAC9Q9UKV0 1011 aa20.08■□□□□ 0.81
PDLIM5-216ENST00000511767 VPS37DQ86XT2 251 aa20.07■□□□□ 0.8
PDLIM5-216ENST00000511767 MTMR14Q8NCE2 650 aa20.07■□□□□ 0.8
PDLIM5-216ENST00000511767 IQSEC3Q9UPP2 1182 aaPredicted RBP20.07■□□□□ 0.8
PDLIM5-216ENST00000511767 A0A1B0GUL6 1792 aa20.06■□□□□ 0.8
PDLIM5-216ENST00000511767 ADM5C9JUS6 153 aa20.06■□□□□ 0.8
PDLIM5-216ENST00000511767 SLC5A1P13866 664 aa20.06■□□□□ 0.8
PDLIM5-216ENST00000511767 VEGFBP49765 207 aa20.06■□□□□ 0.8
PDLIM5-216ENST00000511767 ITPRIPQ8IWB1 547 aa20.06■□□□□ 0.8
PDLIM5-216ENST00000511767 SULF1Q8IWU6 871 aa20.06■□□□□ 0.8
PDLIM5-216ENST00000511767 GGA3Q9NZ52 723 aa20.06■□□□□ 0.8
PDLIM5-216ENST00000511767 CNTNAP1P78357 1384 aa20.06■□□□□ 0.8
PDLIM5-216ENST00000511767 F8W031 263 aaPredicted RBP20.05■□□□□ 0.8
PDLIM5-216ENST00000511767 MS4A1P11836 297 aa20.05■□□□□ 0.8
PDLIM5-216ENST00000511767 TIMM10P62072 90 aa20.05■□□□□ 0.8
PDLIM5-216ENST00000511767 POLA2Q14181 598 aa20.05■□□□□ 0.8
PDLIM5-216ENST00000511767 MFSD14BQ5SR56 506 aa20.05■□□□□ 0.8
PDLIM5-216ENST00000511767 SSH3Q8TE77 659 aa20.05■□□□□ 0.8
PDLIM5-216ENST00000511767 PRMT6Q96LA8 375 aaPredicted RBP20.05■□□□□ 0.8
PDLIM5-216ENST00000511767 ABT1Q9ULW3 272 aaKnown RBP20.05■□□□□ 0.8
PDLIM5-216ENST00000511767 TLL2Q9Y6L7 1015 aa20.05■□□□□ 0.8
PDLIM5-216ENST00000511767 PITPNM2Q9BZ72 1349 aa20.04■□□□□ 0.8
PDLIM5-216ENST00000511767 GRIK5Q16478 980 aa20.04■□□□□ 0.8
PDLIM5-216ENST00000511767 ATP2B3Q16720 1220 aa20.04■□□□□ 0.8
PDLIM5-216ENST00000511767 SAPCD2Q86UD0 394 aa20.04■□□□□ 0.8
PDLIM5-216ENST00000511767 SCAF8Q9UPN6 1271 aaKnown RBP20.04■□□□□ 0.8
PDLIM5-216ENST00000511767 PCDHAC2Q9Y5I4 1007 aa20.04■□□□□ 0.8
PDLIM5-216ENST00000511767 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.04■□□□□ 0.8
PDLIM5-216ENST00000511767 TFCP2Q12800 502 aa20.03■□□□□ 0.8
PDLIM5-216ENST00000511767 DLGAP5Q15398 846 aa20.03■□□□□ 0.8
PDLIM5-216ENST00000511767 C1orf115Q9H7X2 142 aa20.03■□□□□ 0.8
PDLIM5-216ENST00000511767 ZNF408Q9H9D4 720 aa20.03■□□□□ 0.8
PDLIM5-216ENST00000511767 ZNF646O15015 1829 aaPredicted RBP20.03■□□□□ 0.8
PDLIM5-216ENST00000511767 FRAT2O75474 233 aaPredicted RBP20.02■□□□□ 0.8
PDLIM5-216ENST00000511767 CHAF1AQ13111 956 aaPredicted RBP20.02■□□□□ 0.8
PDLIM5-216ENST00000511767 G3BP1Q13283 466 aaKnown RBP eCLIP20.02■□□□□ 0.8
PDLIM5-216ENST00000511767 CFAP100Q494V2 611 aa20.02■□□□□ 0.8
PDLIM5-216ENST00000511767 MRIQ9BWK5 157 aa20.02■□□□□ 0.8
PDLIM5-216ENST00000511767 TTF2Q9UNY4 1162 aaKnown RBP20.02■□□□□ 0.8
PDLIM5-216ENST00000511767 ZBTB22O15209 634 aa20.01■□□□□ 0.79
PDLIM5-216ENST00000511767 TBC1D22AQ8WUA7 517 aa20.01■□□□□ 0.79
PDLIM5-216ENST00000511767 CDCA5Q96FF9 252 aa20.01■□□□□ 0.79
PDLIM5-216ENST00000511767 PCNTO95613 3336 aa20.01■□□□□ 0.79
PDLIM5-216ENST00000511767 ADORA1P30542 326 aa20■□□□□ 0.79
PDLIM5-216ENST00000511767 PRAMEF18Q5VWM3 479 aa20■□□□□ 0.79
PDLIM5-216ENST00000511767 HHIPL1Q96JK4 782 aa20■□□□□ 0.79
PDLIM5-216ENST00000511767 AKAP2Q9Y2D5 859 aa20■□□□□ 0.79
PDLIM5-216ENST00000511767 NOP58Q9Y2X3 529 aaKnown RBP20■□□□□ 0.79
PDLIM5-216ENST00000511767 WDR33Q9C0J8 1336 aaKnown RBP20■□□□□ 0.79
PDLIM5-216ENST00000511767 TRPM7Q96QT4 1865 aa19.99■□□□□ 0.79
PDLIM5-216ENST00000511767 SPDYE2BA6NHP3 402 aa19.99■□□□□ 0.79
PDLIM5-216ENST00000511767 SPDYE6P0CI01 402 aa19.99■□□□□ 0.79
PDLIM5-216ENST00000511767 PHKA1P46020 1223 aa19.99■□□□□ 0.79
PDLIM5-216ENST00000511767 HDLBPQ00341 1268 aaKnown RBP19.99■□□□□ 0.79
PDLIM5-216ENST00000511767 C2orf69Q8N8R5 385 aa19.99■□□□□ 0.79
PDLIM5-216ENST00000511767 GBA2Q9HCG7 927 aaPredicted RBP19.99■□□□□ 0.79
PDLIM5-216ENST00000511767 GNL3LQ9NVN8 582 aaKnown RBP19.99■□□□□ 0.79
PDLIM5-216ENST00000511767 SERPINA10Q9UK55 444 aa19.99■□□□□ 0.79
PDLIM5-216ENST00000511767 COG6Q9Y2V7 657 aa19.99■□□□□ 0.79
PDLIM5-216ENST00000511767 AOX1Q06278 1338 aa19.99■□□□□ 0.79
PDLIM5-216ENST00000511767 A0A1B0GUL7 405 aa19.98■□□□□ 0.79
PDLIM5-216ENST00000511767 MVPQ14764 893 aaKnown RBP19.98■□□□□ 0.79
PDLIM5-216ENST00000511767 CCDC102BQ68D86 513 aa19.98■□□□□ 0.79
PDLIM5-216ENST00000511767 CYP4F22Q6NT55 531 aa19.98■□□□□ 0.79
PDLIM5-216ENST00000511767 WDR66Q8TBY9 1149 aa19.98■□□□□ 0.79
PDLIM5-216ENST00000511767 XAGE2Q96GT9 111 aa19.98■□□□□ 0.79
PDLIM5-216ENST00000511767 CAPNS2Q96L46 248 aa19.98■□□□□ 0.79
PDLIM5-216ENST00000511767 ZBTB40Q9NUA8 1239 aa19.98■□□□□ 0.79
PDLIM5-216ENST00000511767 SUGT1Q9Y2Z0 365 aa19.98■□□□□ 0.79
PDLIM5-216ENST00000511767 SURF6O75683 361 aaKnown RBP19.97■□□□□ 0.79
PDLIM5-216ENST00000511767 ECE1P42892 770 aa19.97■□□□□ 0.79
PDLIM5-216ENST00000511767 RBM5P52756 815 aaKnown RBP eCLIP19.97■□□□□ 0.79
PDLIM5-216ENST00000511767 PDE3AQ14432 1141 aa19.97■□□□□ 0.79
PDLIM5-216ENST00000511767 CEP85Q6P2H3 762 aa19.97■□□□□ 0.79
PDLIM5-216ENST00000511767 CRKP46108 304 aa19.96■□□□□ 0.79
PDLIM5-216ENST00000511767 HUNKP57058 714 aa19.96■□□□□ 0.79
PDLIM5-216ENST00000511767 C20orf194Q5TEA3 1177 aa19.96■□□□□ 0.79
PDLIM5-216ENST00000511767 APOBEC3FQ8IUX4 373 aaKnown RBP19.96■□□□□ 0.79
PDLIM5-216ENST00000511767 NEUROD6Q96NK8 337 aa19.96■□□□□ 0.79
PDLIM5-216ENST00000511767 DEFB129Q9H1M3 183 aa19.96■□□□□ 0.79
PDLIM5-216ENST00000511767 DENND2AQ9ULE3 1009 aa19.96■□□□□ 0.79
PDLIM5-216ENST00000511767 DDX19BQ9UMR2 479 aa19.96■□□□□ 0.79
PDLIM5-216ENST00000511767 SEMA3EO15041 775 aa19.95■□□□□ 0.78
PDLIM5-216ENST00000511767 CLRN2A0PK11 232 aa19.94■□□□□ 0.78
PDLIM5-216ENST00000511767 MYO1BO43795 1136 aa19.94■□□□□ 0.78
PDLIM5-216ENST00000511767 TDRD3Q9H7E2 651 aaKnown RBP19.94■□□□□ 0.78
PDLIM5-216ENST00000511767 GPR108Q9NPR9 543 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms