RNA–Protein interactions for RNA: ENST00000509576.5

DDX41-210, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-210ENST00000509576 CDAN1Q8IWY9 1227 aa17.09■□□□□ 0.33
DDX41-210ENST00000509576 PRMT6Q96LA8 375 aaPredicted RBP17.09■□□□□ 0.33
DDX41-210ENST00000509576 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
DDX41-210ENST00000509576 ZSWIM8A7E2V4 1837 aa17.08■□□□□ 0.33
DDX41-210ENST00000509576 COL1A1P02452 1464 aaPredicted RBP17.08■□□□□ 0.32
DDX41-210ENST00000509576 GPR25O00155 361 aa17.08■□□□□ 0.32
DDX41-210ENST00000509576 GJA5P36382 358 aa17.08■□□□□ 0.32
DDX41-210ENST00000509576 TTLL12Q14166 644 aaPredicted RBP17.08■□□□□ 0.32
DDX41-210ENST00000509576 SPRYD7Q5W111 196 aa17.08■□□□□ 0.32
DDX41-210ENST00000509576 REM2Q8IYK8 340 aaPredicted RBP17.08■□□□□ 0.32
DDX41-210ENST00000509576 MTMR14Q8NCE2 650 aa17.08■□□□□ 0.32
DDX41-210ENST00000509576 CHMP4AQ9BY43 222 aa17.08■□□□□ 0.32
DDX41-210ENST00000509576 MYH16Q9H6N6 1097 aa17.08■□□□□ 0.32
DDX41-210ENST00000509576 CLRN2A0PK11 232 aa17.07■□□□□ 0.32
DDX41-210ENST00000509576 ANKRD18BA2A2Z9 1011 aa17.07■□□□□ 0.32
DDX41-210ENST00000509576 F8W031 263 aaPredicted RBP17.07■□□□□ 0.32
DDX41-210ENST00000509576 GRIK5Q16478 980 aa17.07■□□□□ 0.32
DDX41-210ENST00000509576 LMBR1LQ6UX01 489 aa17.07■□□□□ 0.32
DDX41-210ENST00000509576 APOBEC3FQ8IUX4 373 aaKnown RBP17.07■□□□□ 0.32
DDX41-210ENST00000509576 CFHR5Q9BXR6 569 aa17.07■□□□□ 0.32
DDX41-210ENST00000509576 DEFB129Q9H1M3 183 aa17.07■□□□□ 0.32
DDX41-210ENST00000509576 ANGEL1Q9UNK9 670 aaKnown RBP17.07■□□□□ 0.32
DDX41-210ENST00000509576 SPDYE2BA6NHP3 402 aa17.06■□□□□ 0.32
DDX41-210ENST00000509576 IGF2BP3O00425 579 aaKnown RBP eCLIP17.06■□□□□ 0.32
DDX41-210ENST00000509576 SPDYE6P0CI01 402 aa17.06■□□□□ 0.32
DDX41-210ENST00000509576 MAP3K11Q16584 847 aa17.06■□□□□ 0.32
DDX41-210ENST00000509576 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
DDX41-210ENST00000509576 NBPF12Q5TAG4 269 aaPredicted RBP17.06■□□□□ 0.32
DDX41-210ENST00000509576 WDR63Q8IWG1 891 aa17.06■□□□□ 0.32
DDX41-210ENST00000509576 PUS3Q9BZE2 481 aaKnown RBP17.06■□□□□ 0.32
DDX41-210ENST00000509576 MRS2Q9HD23 443 aa17.06■□□□□ 0.32
DDX41-210ENST00000509576 RBBP6Q7Z6E9 1792 aaKnown RBP17.06■□□□□ 0.32
DDX41-210ENST00000509576 GRM8O00222 908 aa17.04■□□□□ 0.32
DDX41-210ENST00000509576 KCNJ4P48050 445 aa17.04■□□□□ 0.32
DDX41-210ENST00000509576 IFIT5Q13325 482 aaKnown RBP17.04■□□□□ 0.32
DDX41-210ENST00000509576 DLGAP5Q15398 846 aa17.04■□□□□ 0.32
DDX41-210ENST00000509576 NOM1Q5C9Z4 860 aaKnown RBP17.04■□□□□ 0.32
DDX41-210ENST00000509576 SUCLG2Q96I99 432 aa17.04■□□□□ 0.32
DDX41-210ENST00000509576 CHMP3Q9Y3E7 222 aa17.04■□□□□ 0.32
DDX41-210ENST00000509576 MYH13Q9UKX3 1938 aa17.04■□□□□ 0.32
DDX41-210ENST00000509576 KIAA0100Q14667 2235 aaKnown RBP17.03■□□□□ 0.32
DDX41-210ENST00000509576 USP2O75604 605 aaPredicted RBP17.03■□□□□ 0.32
DDX41-210ENST00000509576 ARMC9Q7Z3E5 817 aa17.03■□□□□ 0.32
DDX41-210ENST00000509576 WNK4Q96J92 1243 aa17.03■□□□□ 0.32
DDX41-210ENST00000509576 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.03■□□□□ 0.32
DDX41-210ENST00000509576 HDAC9Q9UKV0 1011 aa17.03■□□□□ 0.32
DDX41-210ENST00000509576 FAM205AQ6ZU69 1335 aa17.02■□□□□ 0.32
DDX41-210ENST00000509576 PLIN1O60240 522 aa17.02■□□□□ 0.32
DDX41-210ENST00000509576 NBPF7P0C2Y1 421 aaPredicted RBP17.02■□□□□ 0.32
DDX41-210ENST00000509576 NF2P35240 595 aa17.02■□□□□ 0.32
DDX41-210ENST00000509576 GYG1P46976 350 aa17.02■□□□□ 0.32
DDX41-210ENST00000509576 MMP14P50281 582 aa17.02■□□□□ 0.32
DDX41-210ENST00000509576 FKBP1AP62942 108 aaKnown RBP17.02■□□□□ 0.32
DDX41-210ENST00000509576 IFNL1Q8IU54 200 aa17.02■□□□□ 0.32
DDX41-210ENST00000509576 TDRD7Q8NHU6 1098 aaKnown RBP17.02■□□□□ 0.32
DDX41-210ENST00000509576 PTPN18Q99952 460 aa17.02■□□□□ 0.32
DDX41-210ENST00000509576 ZNF521Q96K83 1311 aa17.01■□□□□ 0.31
DDX41-210ENST00000509576 LDHAL6AQ6ZMR3 332 aa17.01■□□□□ 0.31
DDX41-210ENST00000509576 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
DDX41-210ENST00000509576 FAM84BQ96KN1 310 aaPredicted RBP17.01■□□□□ 0.31
DDX41-210ENST00000509576 TEPSINQ96N21 525 aa17.01■□□□□ 0.31
DDX41-210ENST00000509576 FKTNO75072 461 aa17■□□□□ 0.31
DDX41-210ENST00000509576 SREBF2Q12772 1141 aa17■□□□□ 0.31
DDX41-210ENST00000509576 RASA3Q14644 834 aa17■□□□□ 0.31
DDX41-210ENST00000509576 FBXO46Q6PJ61 603 aaPredicted RBP17■□□□□ 0.31
DDX41-210ENST00000509576 ZNF804AQ7Z570 1209 aa17■□□□□ 0.31
DDX41-210ENST00000509576 VEZTQ9HBM0 779 aa17■□□□□ 0.31
DDX41-210ENST00000509576 RIPOR2Q9Y4F9 1068 aa17■□□□□ 0.31
DDX41-210ENST00000509576 UTYO14607 1347 aa16.99■□□□□ 0.31
DDX41-210ENST00000509576 PKN2Q16513 984 aaKnown RBP16.99■□□□□ 0.31
DDX41-210ENST00000509576 SPDYE2Q495Y8 402 aa16.99■□□□□ 0.31
DDX41-210ENST00000509576 ANKRD44Q8N8A2 993 aa16.99■□□□□ 0.31
DDX41-210ENST00000509576 CCDC57Q2TAC2 916 aa16.98■□□□□ 0.31
DDX41-210ENST00000509576 LRRC24Q50LG9 513 aa16.98■□□□□ 0.31
DDX41-210ENST00000509576 OTOP1Q7RTM1 612 aa16.98■□□□□ 0.31
DDX41-210ENST00000509576 VGLL2Q8N8G2 317 aa16.98■□□□□ 0.31
DDX41-210ENST00000509576 SLC10A4Q96EP9 437 aa16.98■□□□□ 0.31
DDX41-210ENST00000509576 TDRD3Q9H7E2 651 aaKnown RBP16.98■□□□□ 0.31
DDX41-210ENST00000509576 CNNM1Q9NRU3 951 aa16.98■□□□□ 0.31
DDX41-210ENST00000509576 ZNF70Q9UC06 446 aaPredicted RBP16.98■□□□□ 0.31
DDX41-210ENST00000509576 IQSEC3Q9UPP2 1182 aaPredicted RBP16.98■□□□□ 0.31
DDX41-210ENST00000509576 PPP2R3BQ9Y5P8 575 aa16.98■□□□□ 0.31
DDX41-210ENST00000509576 POTEFA5A3E0 1075 aa16.97■□□□□ 0.31
DDX41-210ENST00000509576 MANSC4A6NHS7 340 aaPredicted RBP16.97■□□□□ 0.31
DDX41-210ENST00000509576 ALDH1L1O75891 902 aa16.97■□□□□ 0.31
DDX41-210ENST00000509576 ZBTB48P10074 688 aaPredicted RBP16.97■□□□□ 0.31
DDX41-210ENST00000509576 CRHR2Q13324 411 aa16.97■□□□□ 0.31
DDX41-210ENST00000509576 RABL6Q3YEC7 729 aaPredicted RBP16.97■□□□□ 0.31
DDX41-210ENST00000509576 MFSD14BQ5SR56 506 aa16.97■□□□□ 0.31
DDX41-210ENST00000509576 SLC4A10Q6U841 1118 aa16.97■□□□□ 0.31
DDX41-210ENST00000509576 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.97■□□□□ 0.31
DDX41-210ENST00000509576 MS4A4AQ96JQ5 239 aa16.97■□□□□ 0.31
DDX41-210ENST00000509576 BICC1Q9H694 974 aaKnown RBP16.97■□□□□ 0.31
DDX41-210ENST00000509576 TESPA1A2RU30 521 aaPredicted RBP16.96■□□□□ 0.31
DDX41-210ENST00000509576 UBE4AQ14139 1066 aa16.96■□□□□ 0.31
DDX41-210ENST00000509576 FBXO33Q7Z6M2 555 aa16.96■□□□□ 0.31
DDX41-210ENST00000509576 KLHDC4Q8TBB5 520 aa16.96■□□□□ 0.31
DDX41-210ENST00000509576 TMEM39BQ9GZU3 492 aa16.96■□□□□ 0.31
DDX41-210ENST00000509576 TTF2Q9UNY4 1162 aaKnown RBP16.96■□□□□ 0.31
DDX41-210ENST00000509576 DZIP1LQ8IYY4 767 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 282.8 ms