RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 SLC4A10Q6U841 1118 aa18.41■□□□□ 0.54
HMGCL-208ENST00000509389 REM2Q8IYK8 340 aaPredicted RBP18.41■□□□□ 0.54
HMGCL-208ENST00000509389 CERS5Q8N5B7 392 aa18.41■□□□□ 0.54
HMGCL-208ENST00000509389 C9orf78Q9NZ63 289 aaPredicted RBP18.41■□□□□ 0.54
HMGCL-208ENST00000509389 TTLL12Q14166 644 aaPredicted RBP18.4■□□□□ 0.54
HMGCL-208ENST00000509389 LDHAL6AQ6ZMR3 332 aa18.4■□□□□ 0.54
HMGCL-208ENST00000509389 SRCIN1Q9C0H9 1055 aa18.4■□□□□ 0.54
HMGCL-208ENST00000509389 PLIN1O60240 522 aa18.39■□□□□ 0.53
HMGCL-208ENST00000509389 IL1R1P14778 569 aa18.39■□□□□ 0.53
HMGCL-208ENST00000509389 NF2P35240 595 aa18.39■□□□□ 0.53
HMGCL-208ENST00000509389 TAF7LQ5H9L4 462 aa18.39■□□□□ 0.53
HMGCL-208ENST00000509389 ZNF804AQ7Z570 1209 aa18.39■□□□□ 0.53
HMGCL-208ENST00000509389 APOBEC3FQ8IUX4 373 aaKnown RBP18.39■□□□□ 0.53
HMGCL-208ENST00000509389 CNNM1Q9NRU3 951 aa18.39■□□□□ 0.53
HMGCL-208ENST00000509389 GTF3C3Q9Y5Q9 886 aa18.38■□□□□ 0.53
HMGCL-208ENST00000509389 RRP1P56182 461 aaKnown RBP18.37■□□□□ 0.53
HMGCL-208ENST00000509389 DLGAP5Q15398 846 aa18.37■□□□□ 0.53
HMGCL-208ENST00000509389 MTMR14Q8NCE2 650 aa18.37■□□□□ 0.53
HMGCL-208ENST00000509389 KAZALD1Q96I82 304 aa18.37■□□□□ 0.53
HMGCL-208ENST00000509389 SUCLG2Q96I99 432 aa18.37■□□□□ 0.53
HMGCL-208ENST00000509389 ECM29Q5VYK3 1845 aa18.37■□□□□ 0.53
HMGCL-208ENST00000509389 RGS19P49795 217 aa18.36■□□□□ 0.53
HMGCL-208ENST00000509389 JAG2Q9Y219 1238 aa18.36■□□□□ 0.53
HMGCL-208ENST00000509389 PCDHAC2Q9Y5I4 1007 aa18.36■□□□□ 0.53
HMGCL-208ENST00000509389 F8W031 263 aaPredicted RBP18.35■□□□□ 0.53
HMGCL-208ENST00000509389 NBPF7P0C2Y1 421 aaPredicted RBP18.35■□□□□ 0.53
HMGCL-208ENST00000509389 FKBP1AP62942 108 aaKnown RBP18.35■□□□□ 0.53
HMGCL-208ENST00000509389 PRKG1Q13976 671 aa18.35■□□□□ 0.53
HMGCL-208ENST00000509389 ARMC9Q7Z3E5 817 aa18.35■□□□□ 0.53
HMGCL-208ENST00000509389 UTYO14607 1347 aa18.35■□□□□ 0.53
HMGCL-208ENST00000509389 PTPN12Q05209 780 aaKnown RBP18.34■□□□□ 0.53
HMGCL-208ENST00000509389 CFAP100Q494V2 611 aa18.34■□□□□ 0.53
HMGCL-208ENST00000509389 MRPL50Q8N5N7 158 aaKnown RBP18.34■□□□□ 0.53
HMGCL-208ENST00000509389 PUS3Q9BZE2 481 aaKnown RBP18.34■□□□□ 0.53
HMGCL-208ENST00000509389 DEFB129Q9H1M3 183 aa18.34■□□□□ 0.53
HMGCL-208ENST00000509389 COL1A1P02452 1464 aaPredicted RBP18.34■□□□□ 0.53
HMGCL-208ENST00000509389 TM4SF4P48230 202 aa18.33■□□□□ 0.53
HMGCL-208ENST00000509389 RARSP54136 660 aaKnown RBP18.33■□□□□ 0.53
HMGCL-208ENST00000509389 MKRN3Q13064 507 aaKnown RBP18.33■□□□□ 0.53
HMGCL-208ENST00000509389 UBE4AQ14139 1066 aa18.33■□□□□ 0.53
HMGCL-208ENST00000509389 LDLRAD1Q5T700 205 aa18.33■□□□□ 0.53
HMGCL-208ENST00000509389 SPDYE2BA6NHP3 402 aa18.32■□□□□ 0.52
HMGCL-208ENST00000509389 SPDYE6P0CI01 402 aa18.32■□□□□ 0.52
HMGCL-208ENST00000509389 MLLT1Q03111 559 aaPredicted RBP18.32■□□□□ 0.52
HMGCL-208ENST00000509389 TDRD7Q8NHU6 1098 aaKnown RBP18.32■□□□□ 0.52
HMGCL-208ENST00000509389 PRMT6Q96LA8 375 aaPredicted RBP18.32■□□□□ 0.52
HMGCL-208ENST00000509389 ANGEL1Q9UNK9 670 aaKnown RBP18.32■□□□□ 0.52
HMGCL-208ENST00000509389 FZD1Q9UP38 647 aa18.32■□□□□ 0.52
HMGCL-208ENST00000509389 AOX1Q06278 1338 aa18.32■□□□□ 0.52
HMGCL-208ENST00000509389 FAM205AQ6ZU69 1335 aa18.32■□□□□ 0.52
HMGCL-208ENST00000509389 CLRN2A0PK11 232 aa18.31■□□□□ 0.52
HMGCL-208ENST00000509389 TBC1D8O95759 1140 aa18.31■□□□□ 0.52
HMGCL-208ENST00000509389 GYG1P46976 350 aa18.31■□□□□ 0.52
HMGCL-208ENST00000509389 ERICH6BQ5W0A0 696 aa18.31■□□□□ 0.52
HMGCL-208ENST00000509389 FAM84BQ96KN1 310 aaPredicted RBP18.31■□□□□ 0.52
HMGCL-208ENST00000509389 BICC1Q9H694 974 aaKnown RBP18.31■□□□□ 0.52
HMGCL-208ENST00000509389 RIPOR2Q9Y4F9 1068 aa18.31■□□□□ 0.52
HMGCL-208ENST00000509389 MYO1BO43795 1136 aa18.3■□□□□ 0.52
HMGCL-208ENST00000509389 HIBADHP31937 336 aaKnown RBP18.3■□□□□ 0.52
HMGCL-208ENST00000509389 RABL6Q3YEC7 729 aaPredicted RBP18.3■□□□□ 0.52
HMGCL-208ENST00000509389 CTU1Q7Z7A3 348 aaKnown RBP18.3■□□□□ 0.52
HMGCL-208ENST00000509389 PPP2R3BQ9Y5P8 575 aa18.3■□□□□ 0.52
HMGCL-208ENST00000509389 SSC5DA1L4H1 1573 aa18.3■□□□□ 0.52
HMGCL-208ENST00000509389 PTPRCP08575 1304 aa18.3■□□□□ 0.52
HMGCL-208ENST00000509389 MROH5Q6ZUA9 1318 aa18.3■□□□□ 0.52
HMGCL-208ENST00000509389 RBM5P52756 815 aaKnown RBP eCLIP18.3■□□□□ 0.52
HMGCL-208ENST00000509389 MAP3K11Q16584 847 aa18.3■□□□□ 0.52
HMGCL-208ENST00000509389 ALDH1L2Q3SY69 923 aa18.3■□□□□ 0.52
HMGCL-208ENST00000509389 SPRYD7Q5W111 196 aa18.3■□□□□ 0.52
HMGCL-208ENST00000509389 ANKRD44Q8N8A2 993 aa18.3■□□□□ 0.52
HMGCL-208ENST00000509389 SSH1Q8WYL5 1049 aa18.3■□□□□ 0.52
HMGCL-208ENST00000509389 VEZTQ9HBM0 779 aa18.3■□□□□ 0.52
HMGCL-208ENST00000509389 NEFLP07196 543 aa18.29■□□□□ 0.52
HMGCL-208ENST00000509389 SREBF2Q12772 1141 aa18.29■□□□□ 0.52
HMGCL-208ENST00000509389 LRRC24Q50LG9 513 aa18.29■□□□□ 0.52
HMGCL-208ENST00000509389 MFSD14BQ5SR56 506 aa18.29■□□□□ 0.52
HMGCL-208ENST00000509389 ARAP2Q8WZ64 1704 aa18.28■□□□□ 0.52
HMGCL-208ENST00000509389 PPP1R12BO60237 982 aaPredicted RBP18.28■□□□□ 0.52
HMGCL-208ENST00000509389 SUPT20HL1Q3ZLR7 823 aa18.28■□□□□ 0.52
HMGCL-208ENST00000509389 NBPF12Q5TAG4 269 aaPredicted RBP18.28■□□□□ 0.52
HMGCL-208ENST00000509389 ZNF296Q8WUU4 475 aaPredicted RBP18.28■□□□□ 0.52
HMGCL-208ENST00000509389 SLC10A4Q96EP9 437 aa18.28■□□□□ 0.52
HMGCL-208ENST00000509389 TTF2Q9UNY4 1162 aaKnown RBP18.28■□□□□ 0.52
HMGCL-208ENST00000509389 FBXO33Q7Z6M2 555 aa18.27■□□□□ 0.51
HMGCL-208ENST00000509389 CLMNQ96JQ2 1002 aa18.27■□□□□ 0.51
HMGCL-208ENST00000509389 USP44Q9H0E7 712 aa18.27■□□□□ 0.51
HMGCL-208ENST00000509389 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.27■□□□□ 0.51
HMGCL-208ENST00000509389 SERPINA10Q9UK55 444 aa18.27■□□□□ 0.51
HMGCL-208ENST00000509389 GPR25O00155 361 aa18.26■□□□□ 0.51
HMGCL-208ENST00000509389 BCAR3O75815 825 aa18.26■□□□□ 0.51
HMGCL-208ENST00000509389 RASA3Q14644 834 aa18.26■□□□□ 0.51
HMGCL-208ENST00000509389 SPDYE2Q495Y8 402 aa18.26■□□□□ 0.51
HMGCL-208ENST00000509389 METTL24Q5JXM2 366 aa18.26■□□□□ 0.51
HMGCL-208ENST00000509389 ZNF70Q9UC06 446 aaPredicted RBP18.26■□□□□ 0.51
HMGCL-208ENST00000509389 NOM1Q5C9Z4 860 aaKnown RBP18.25■□□□□ 0.51
HMGCL-208ENST00000509389 VGLL2Q8N8G2 317 aa18.25■□□□□ 0.51
HMGCL-208ENST00000509389 KLHDC4Q8TBB5 520 aa18.25■□□□□ 0.51
HMGCL-208ENST00000509389 CFHR5Q9BXR6 569 aa18.25■□□□□ 0.51
HMGCL-208ENST00000509389 R3HDMLQ9H3Y0 253 aa18.25■□□□□ 0.51
HMGCL-208ENST00000509389 TDRD3Q9H7E2 651 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms