RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 TTLL12Q14166 644 aaPredicted RBP17.1■□□□□ 0.33
CCHCR1-227ENST00000508852 RABL6Q3YEC7 729 aaPredicted RBP17.1■□□□□ 0.33
CCHCR1-227ENST00000508852 ZBED3Q96IU2 234 aaPredicted RBP17.1■□□□□ 0.33
CCHCR1-227ENST00000508852 HIBADHP31937 336 aaKnown RBP17.09■□□□□ 0.33
CCHCR1-227ENST00000508852 RASAL3Q86YV0 1011 aa17.09■□□□□ 0.33
CCHCR1-227ENST00000508852 SUCLG2Q96I99 432 aa17.09■□□□□ 0.33
CCHCR1-227ENST00000508852 ZNF594Q96JF6 807 aaPredicted RBP17.09■□□□□ 0.33
CCHCR1-227ENST00000508852 FAM205AQ6ZU69 1335 aa17.09■□□□□ 0.33
CCHCR1-227ENST00000508852 CASP8AP2Q9UKL3 1982 aa17.09■□□□□ 0.33
CCHCR1-227ENST00000508852 CCER2I3L3R5 266 aa17.08■□□□□ 0.32
CCHCR1-227ENST00000508852 NBPF7P0C2Y1 421 aaPredicted RBP17.08■□□□□ 0.32
CCHCR1-227ENST00000508852 SUPT20HL1Q3ZLR7 823 aa17.08■□□□□ 0.32
CCHCR1-227ENST00000508852 VPS37DQ86XT2 251 aa17.08■□□□□ 0.32
CCHCR1-227ENST00000508852 TSKSQ9UJT2 592 aa17.08■□□□□ 0.32
CCHCR1-227ENST00000508852 CAVIN4Q5BKX8 364 aa17.07■□□□□ 0.32
CCHCR1-227ENST00000508852 TDRD7Q8NHU6 1098 aaKnown RBP17.07■□□□□ 0.32
CCHCR1-227ENST00000508852 SSH1Q8WYL5 1049 aa17.07■□□□□ 0.32
CCHCR1-227ENST00000508852 CSRNP1Q96S65 589 aa17.07■□□□□ 0.32
CCHCR1-227ENST00000508852 BICC1Q9H694 974 aaKnown RBP17.07■□□□□ 0.32
CCHCR1-227ENST00000508852 RNF186Q9NXI6 227 aa17.07■□□□□ 0.32
CCHCR1-227ENST00000508852 RIPOR2Q9Y4F9 1068 aa17.07■□□□□ 0.32
CCHCR1-227ENST00000508852 PPP1R12BO60237 982 aaPredicted RBP17.06■□□□□ 0.32
CCHCR1-227ENST00000508852 SREBF2Q12772 1141 aa17.06■□□□□ 0.32
CCHCR1-227ENST00000508852 TNFAIP1Q13829 316 aa17.06■□□□□ 0.32
CCHCR1-227ENST00000508852 CFAP100Q494V2 611 aa17.06■□□□□ 0.32
CCHCR1-227ENST00000508852 TBC1D22AQ8WUA7 517 aa17.06■□□□□ 0.32
CCHCR1-227ENST00000508852 KAZALD1Q96I82 304 aa17.06■□□□□ 0.32
CCHCR1-227ENST00000508852 ZIC5Q96T25 663 aa17.06■□□□□ 0.32
CCHCR1-227ENST00000508852 DEFB129Q9H1M3 183 aa17.06■□□□□ 0.32
CCHCR1-227ENST00000508852 SERPINA10Q9UK55 444 aa17.06■□□□□ 0.32
CCHCR1-227ENST00000508852 KIF16BQ96L93 1317 aa17.05■□□□□ 0.32
CCHCR1-227ENST00000508852 SPDYE2BA6NHP3 402 aa17.05■□□□□ 0.32
CCHCR1-227ENST00000508852 UBE2Q2LH0YL09 131 aa17.05■□□□□ 0.32
CCHCR1-227ENST00000508852 SNAP23O00161 211 aa17.05■□□□□ 0.32
CCHCR1-227ENST00000508852 TRPA1O75762 1119 aa17.05■□□□□ 0.32
CCHCR1-227ENST00000508852 SPDYE6P0CI01 402 aa17.05■□□□□ 0.32
CCHCR1-227ENST00000508852 METTL24Q5JXM2 366 aa17.05■□□□□ 0.32
CCHCR1-227ENST00000508852 CERS5Q8N5B7 392 aa17.05■□□□□ 0.32
CCHCR1-227ENST00000508852 SMC4Q9NTJ3 1288 aa17.05■□□□□ 0.32
CCHCR1-227ENST00000508852 ARAP2Q8WZ64 1704 aa17.04■□□□□ 0.32
CCHCR1-227ENST00000508852 PDE8BO95263 885 aa17.04■□□□□ 0.32
CCHCR1-227ENST00000508852 TM4SF4P48230 202 aa17.04■□□□□ 0.32
CCHCR1-227ENST00000508852 RBM5P52756 815 aaKnown RBP eCLIP17.04■□□□□ 0.32
CCHCR1-227ENST00000508852 INHBEP58166 350 aa17.04■□□□□ 0.32
CCHCR1-227ENST00000508852 MFSD14BQ5SR56 506 aa17.04■□□□□ 0.32
CCHCR1-227ENST00000508852 TRMT2AQ8IZ69 625 aaKnown RBP17.04■□□□□ 0.32
CCHCR1-227ENST00000508852 FAM84BQ96KN1 310 aaPredicted RBP17.04■□□□□ 0.32
CCHCR1-227ENST00000508852 USP44Q9H0E7 712 aa17.04■□□□□ 0.32
CCHCR1-227ENST00000508852 FBXO3Q9UK99 471 aa17.04■□□□□ 0.32
CCHCR1-227ENST00000508852 F8W031 263 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-227ENST00000508852 FRAT2O75474 233 aaPredicted RBP17.03■□□□□ 0.32
CCHCR1-227ENST00000508852 HDLBPQ00341 1268 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-227ENST00000508852 DGKZQ13574 1117 aa17.03■□□□□ 0.32
CCHCR1-227ENST00000508852 MAP3K11Q16584 847 aa17.03■□□□□ 0.32
CCHCR1-227ENST00000508852 NOM1Q5C9Z4 860 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-227ENST00000508852 PRAMEF18Q5VWM3 479 aa17.03■□□□□ 0.32
CCHCR1-227ENST00000508852 API5Q9BZZ5 524 aaKnown RBP17.03■□□□□ 0.32
CCHCR1-227ENST00000508852 MCOLN1Q9GZU1 580 aa17.03■□□□□ 0.32
CCHCR1-227ENST00000508852 SUGT1Q9Y2Z0 365 aa17.03■□□□□ 0.32
CCHCR1-227ENST00000508852 CCDC85CA6NKD9 419 aa17.02■□□□□ 0.32
CCHCR1-227ENST00000508852 ALDH1A1P00352 501 aa17.02■□□□□ 0.32
CCHCR1-227ENST00000508852 IFIT1P09914 478 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-227ENST00000508852 GYG1P46976 350 aa17.02■□□□□ 0.32
CCHCR1-227ENST00000508852 LDLRAD1Q5T700 205 aa17.02■□□□□ 0.32
CCHCR1-227ENST00000508852 FBXO33Q7Z6M2 555 aa17.02■□□□□ 0.32
CCHCR1-227ENST00000508852 ANKRD44Q8N8A2 993 aa17.02■□□□□ 0.32
CCHCR1-227ENST00000508852 PRMT6Q96LA8 375 aaPredicted RBP17.02■□□□□ 0.32
CCHCR1-227ENST00000508852 PUS3Q9BZE2 481 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-227ENST00000508852 ANGEL1Q9UNK9 670 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-227ENST00000508852 TTF2Q9UNY4 1162 aaKnown RBP17.02■□□□□ 0.32
CCHCR1-227ENST00000508852 MAST3O60307 1309 aa17.01■□□□□ 0.31
CCHCR1-227ENST00000508852 ZBTB48P10074 688 aaPredicted RBP17.01■□□□□ 0.31
CCHCR1-227ENST00000508852 IREB2P48200 963 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-227ENST00000508852 TNNI2P48788 182 aa17.01■□□□□ 0.31
CCHCR1-227ENST00000508852 PUM3Q15397 648 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-227ENST00000508852 MOB2Q70IA6 237 aa17.01■□□□□ 0.31
CCHCR1-227ENST00000508852 SLC10A4Q96EP9 437 aa17.01■□□□□ 0.31
CCHCR1-227ENST00000508852 MRIQ9BWK5 157 aa17.01■□□□□ 0.31
CCHCR1-227ENST00000508852 VEZTQ9HBM0 779 aa17.01■□□□□ 0.31
CCHCR1-227ENST00000508852 SCAF8Q9UPN6 1271 aaKnown RBP17.01■□□□□ 0.31
CCHCR1-227ENST00000508852 MANSC4A6NHS7 340 aaPredicted RBP17■□□□□ 0.31
CCHCR1-227ENST00000508852 UBTFL1P0CB47 393 aaPredicted RBP17■□□□□ 0.31
CCHCR1-227ENST00000508852 PTPN12Q05209 780 aaKnown RBP17■□□□□ 0.31
CCHCR1-227ENST00000508852 PKN2Q16513 984 aaKnown RBP17■□□□□ 0.31
CCHCR1-227ENST00000508852 CFHR5Q9BXR6 569 aa17■□□□□ 0.31
CCHCR1-227ENST00000508852 SPDYE2Q495Y8 402 aa16.99■□□□□ 0.31
CCHCR1-227ENST00000508852 LRRC24Q50LG9 513 aa16.99■□□□□ 0.31
CCHCR1-227ENST00000508852 CTU1Q7Z7A3 348 aaKnown RBP16.99■□□□□ 0.31
CCHCR1-227ENST00000508852 VGLL2Q8N8G2 317 aa16.99■□□□□ 0.31
CCHCR1-227ENST00000508852 ARHGAP45Q92619 1136 aa16.99■□□□□ 0.31
CCHCR1-227ENST00000508852 HOOK2Q96ED9 719 aa16.99■□□□□ 0.31
CCHCR1-227ENST00000508852 CLRN2A0PK11 232 aa16.98■□□□□ 0.31
CCHCR1-227ENST00000508852 EYA2O00167 538 aa16.98■□□□□ 0.31
CCHCR1-227ENST00000508852 SLC5A1P13866 664 aa16.98■□□□□ 0.31
CCHCR1-227ENST00000508852 RGS19P49795 217 aa16.98■□□□□ 0.31
CCHCR1-227ENST00000508852 PRKG1Q13976 671 aa16.98■□□□□ 0.31
CCHCR1-227ENST00000508852 SPRYD7Q5W111 196 aa16.98■□□□□ 0.31
CCHCR1-227ENST00000508852 OTUD7BQ6GQQ9 843 aa16.98■□□□□ 0.31
CCHCR1-227ENST00000508852 DZIP1LQ8IYY4 767 aaKnown RBP16.98■□□□□ 0.31
CCHCR1-227ENST00000508852 LPIN2Q92539 896 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms