RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 MCAMP43121 646 aa12.72□□□□□ -0.37
PTPN20-220ENST00000508715 SCNN1DP51172 638 aa12.72□□□□□ -0.37
PTPN20-220ENST00000508715 EIF6P56537 245 aaKnown RBP12.72□□□□□ -0.37
PTPN20-220ENST00000508715 CAVIN4Q5BKX8 364 aa12.72□□□□□ -0.37
PTPN20-220ENST00000508715 USP17L1Q7RTZ2 530 aa12.72□□□□□ -0.37
PTPN20-220ENST00000508715 GPC2Q8N158 579 aa12.72□□□□□ -0.37
PTPN20-220ENST00000508715 CLASRPQ8N2M8 674 aaKnown RBP12.72□□□□□ -0.37
PTPN20-220ENST00000508715 MYH2Q9UKX2 1941 aa12.72□□□□□ -0.37
PTPN20-220ENST00000508715 MYH7P12883 1935 aa12.71□□□□□ -0.37
PTPN20-220ENST00000508715 GMPSP49915 693 aaPredicted RBP12.71□□□□□ -0.37
PTPN20-220ENST00000508715 NUCB1Q02818 461 aa12.71□□□□□ -0.37
PTPN20-220ENST00000508715 ANKRD45Q5TZF3 282 aa12.71□□□□□ -0.37
PTPN20-220ENST00000508715 STRIP1Q5VSL9 837 aa12.71□□□□□ -0.37
PTPN20-220ENST00000508715 TTLL5Q6EMB2 1281 aa12.71□□□□□ -0.37
PTPN20-220ENST00000508715 B4GALNT3Q6L9W6 998 aa12.71□□□□□ -0.37
PTPN20-220ENST00000508715 RSBN1LQ6PCB5 846 aaPredicted RBP12.71□□□□□ -0.37
PTPN20-220ENST00000508715 L3MBTL3Q96JM7 780 aaPredicted RBP12.71□□□□□ -0.37
PTPN20-220ENST00000508715 ZNF512BQ96KM6 892 aaPredicted RBP12.71□□□□□ -0.37
PTPN20-220ENST00000508715 BCL11AQ9H165 835 aa12.71□□□□□ -0.37
PTPN20-220ENST00000508715 HMG20BQ9P0W2 317 aa12.71□□□□□ -0.37
PTPN20-220ENST00000508715 GJA3Q9Y6H8 435 aa12.71□□□□□ -0.37
PTPN20-220ENST00000508715 G3V3G9 751 aa12.7□□□□□ -0.38
PTPN20-220ENST00000508715 NEFLP07196 543 aa12.7□□□□□ -0.38
PTPN20-220ENST00000508715 YY1P25490 414 aa12.7□□□□□ -0.38
PTPN20-220ENST00000508715 PDE4AP27815 886 aa12.7□□□□□ -0.38
PTPN20-220ENST00000508715 DCAF8Q5TAQ9 597 aa12.7□□□□□ -0.38
PTPN20-220ENST00000508715 TSHZ3Q63HK5 1081 aa12.7□□□□□ -0.38
PTPN20-220ENST00000508715 LNPKQ9C0E8 428 aa12.7□□□□□ -0.38
PTPN20-220ENST00000508715 NMRK2Q9NPI5 230 aa12.7□□□□□ -0.38
PTPN20-220ENST00000508715 NDUFB9Q9Y6M9 179 aa12.7□□□□□ -0.38
PTPN20-220ENST00000508715 EGFRP00533 1210 aa12.69□□□□□ -0.38
PTPN20-220ENST00000508715 EPS15P42566 896 aa12.69□□□□□ -0.38
PTPN20-220ENST00000508715 CHAF1AQ13111 956 aaPredicted RBP12.69□□□□□ -0.38
PTPN20-220ENST00000508715 TNIP1Q15025 636 aa12.69□□□□□ -0.38
PTPN20-220ENST00000508715 CHD1LQ86WJ1 897 aa12.69□□□□□ -0.38
PTPN20-220ENST00000508715 SKAP1Q86WV1 359 aa12.69□□□□□ -0.38
PTPN20-220ENST00000508715 VPS37DQ86XT2 251 aa12.69□□□□□ -0.38
PTPN20-220ENST00000508715 ZNF784Q8NCA9 323 aaPredicted RBP12.69□□□□□ -0.38
PTPN20-220ENST00000508715 ZNF526Q8TF50 670 aaPredicted RBP12.69□□□□□ -0.38
PTPN20-220ENST00000508715 ZNF384Q8TF68 577 aa12.69□□□□□ -0.38
PTPN20-220ENST00000508715 SNRKQ9NRH2 765 aa12.69□□□□□ -0.38
PTPN20-220ENST00000508715 GPRC5DQ9NZD1 345 aa12.69□□□□□ -0.38
PTPN20-220ENST00000508715 ECM29Q5VYK3 1845 aa12.69□□□□□ -0.38
PTPN20-220ENST00000508715 PDS5AQ29RF7 1337 aaKnown RBP12.68□□□□□ -0.38
PTPN20-220ENST00000508715 SEMA3EO15041 775 aa12.68□□□□□ -0.38
PTPN20-220ENST00000508715 IFIT2P09913 472 aaKnown RBP12.68□□□□□ -0.38
PTPN20-220ENST00000508715 FKBP1AP62942 108 aaKnown RBP12.68□□□□□ -0.38
PTPN20-220ENST00000508715 MFSD14BQ5SR56 506 aa12.68□□□□□ -0.38
PTPN20-220ENST00000508715 ERICH6BQ5W0A0 696 aa12.68□□□□□ -0.38
PTPN20-220ENST00000508715 DPY19L2Q6NUT2 758 aa12.68□□□□□ -0.38
PTPN20-220ENST00000508715 TBC1D9Q6ZT07 1266 aa12.68□□□□□ -0.38
PTPN20-220ENST00000508715 SPATA5Q8NB90 893 aa12.68□□□□□ -0.38
PTPN20-220ENST00000508715 AGBL3Q8NEM8 1001 aa12.68□□□□□ -0.38
PTPN20-220ENST00000508715 PI4K2BQ8TCG2 481 aa12.68□□□□□ -0.38
PTPN20-220ENST00000508715 FBXW7Q969H0 707 aa12.68□□□□□ -0.38
PTPN20-220ENST00000508715 RRAGCQ9HB90 399 aa12.68□□□□□ -0.38
PTPN20-220ENST00000508715 DENND2AQ9ULE3 1009 aa12.68□□□□□ -0.38
PTPN20-220ENST00000508715 PCDHAC2Q9Y5I4 1007 aa12.68□□□□□ -0.38
PTPN20-220ENST00000508715 AOX1Q06278 1338 aa12.67□□□□□ -0.38
PTPN20-220ENST00000508715 AK9Q5TCS8 1911 aa12.67□□□□□ -0.38
PTPN20-220ENST00000508715 CYP2E1P05181 493 aaPredicted RBP12.67□□□□□ -0.38
PTPN20-220ENST00000508715 UQCRFS1P1P0C7P4 283 aa12.67□□□□□ -0.38
PTPN20-220ENST00000508715 ATP5JP18859 108 aa12.67□□□□□ -0.38
PTPN20-220ENST00000508715 PRDX5P30044 214 aa12.67□□□□□ -0.38
PTPN20-220ENST00000508715 ZAP70P43403 619 aa12.67□□□□□ -0.38
PTPN20-220ENST00000508715 HIRAP54198 1017 aaPredicted RBP12.67□□□□□ -0.38
PTPN20-220ENST00000508715 ZNF280AP59817 542 aaPredicted RBP12.67□□□□□ -0.38
PTPN20-220ENST00000508715 CCDC158Q5M9N0 1113 aa12.67□□□□□ -0.38
PTPN20-220ENST00000508715 TTC39AQ5SRH9 613 aa12.67□□□□□ -0.38
PTPN20-220ENST00000508715 GORABQ5T7V8 394 aa12.67□□□□□ -0.38
PTPN20-220ENST00000508715 KIAA0825Q8IV33 1275 aa12.67□□□□□ -0.38
PTPN20-220ENST00000508715 DPF2Q92785 391 aa12.67□□□□□ -0.38
PTPN20-220ENST00000508715 EDC3Q96F86 508 aaKnown RBP12.67□□□□□ -0.38
PTPN20-220ENST00000508715 ANTXR1Q9H6X2 564 aa12.67□□□□□ -0.38
PTPN20-220ENST00000508715 GNL3LQ9NVN8 582 aaKnown RBP12.67□□□□□ -0.38
PTPN20-220ENST00000508715 CNOT7Q9UIV1 285 aaKnown RBP12.67□□□□□ -0.38
PTPN20-220ENST00000508715 CDK5RAP2Q96SN8 1893 aa12.67□□□□□ -0.38
PTPN20-220ENST00000508715 MAST2Q6P0Q8 1798 aa12.66□□□□□ -0.38
PTPN20-220ENST00000508715 SALL1Q9NSC2 1324 aa12.66□□□□□ -0.38
PTPN20-220ENST00000508715 KIF3CO14782 793 aa12.66□□□□□ -0.38
PTPN20-220ENST00000508715 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
PTPN20-220ENST00000508715 POTEJP0CG39 1038 aa12.66□□□□□ -0.38
PTPN20-220ENST00000508715 RPS12P25398 132 aaKnown RBP12.66□□□□□ -0.38
PTPN20-220ENST00000508715 SAMD7Q7Z3H4 446 aa12.66□□□□□ -0.38
PTPN20-220ENST00000508715 PLEKHM2Q8IWE5 1019 aa12.66□□□□□ -0.38
PTPN20-220ENST00000508715 MICALL2Q8IY33 904 aa12.66□□□□□ -0.38
PTPN20-220ENST00000508715 TRPM4Q8TD43 1214 aa12.66□□□□□ -0.38
PTPN20-220ENST00000508715 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.66□□□□□ -0.38
PTPN20-220ENST00000508715 ZBED3Q96IU2 234 aaPredicted RBP12.66□□□□□ -0.38
PTPN20-220ENST00000508715 PIH1D3Q9NQM4 214 aaKnown RBP12.66□□□□□ -0.38
PTPN20-220ENST00000508715 PPP4R2Q9NY27 417 aa12.66□□□□□ -0.38
PTPN20-220ENST00000508715 STAP2Q9UGK3 403 aa12.66□□□□□ -0.38
PTPN20-220ENST00000508715 F8W031 263 aaPredicted RBP12.65□□□□□ -0.38
PTPN20-220ENST00000508715 FRAT2O75474 233 aaPredicted RBP12.65□□□□□ -0.38
PTPN20-220ENST00000508715 PDE1AP54750 535 aa12.65□□□□□ -0.38
PTPN20-220ENST00000508715 WDR66Q8TBY9 1149 aa12.65□□□□□ -0.38
PTPN20-220ENST00000508715 BOLA2Q9H3K6 86 aa12.65□□□□□ -0.38
PTPN20-220ENST00000508715 TAF1DQ9H5J8 278 aaPredicted RBP12.65□□□□□ -0.38
PTPN20-220ENST00000508715 ECHDC1Q9NTX5 307 aa12.65□□□□□ -0.38
PTPN20-220ENST00000508715 ASTN2O75129 1339 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms