RNA–Protein interactions for RNA: ENST00000508514.5

SKP2-204, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 3 BASIC

Gene SKP2, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-204ENST00000508514 MTMR14Q8NCE2 650 aa22.69■■□□□ 1.22
SKP2-204ENST00000508514 HDAC9Q9UKV0 1011 aa22.69■■□□□ 1.22
SKP2-204ENST00000508514 FZD1Q9UP38 647 aa22.69■■□□□ 1.22
SKP2-204ENST00000508514 PTPN12Q05209 780 aaKnown RBP22.68■■□□□ 1.22
SKP2-204ENST00000508514 CNNM1Q9NRU3 951 aa22.68■■□□□ 1.22
SKP2-204ENST00000508514 F8W031 263 aaPredicted RBP22.67■■□□□ 1.22
SKP2-204ENST00000508514 RGS19P49795 217 aa22.67■■□□□ 1.22
SKP2-204ENST00000508514 DLGAP5Q15398 846 aa22.67■■□□□ 1.22
SKP2-204ENST00000508514 TAF7LQ5H9L4 462 aa22.67■■□□□ 1.22
SKP2-204ENST00000508514 ZNF804AQ7Z570 1209 aa22.67■■□□□ 1.22
SKP2-204ENST00000508514 APOBEC3FQ8IUX4 373 aaKnown RBP22.67■■□□□ 1.22
SKP2-204ENST00000508514 PRMT6Q96LA8 375 aaPredicted RBP22.67■■□□□ 1.22
SKP2-204ENST00000508514 RIPOR2Q9Y4F9 1068 aa22.67■■□□□ 1.22
SKP2-204ENST00000508514 FKBP1AP62942 108 aaKnown RBP22.66■■□□□ 1.22
SKP2-204ENST00000508514 PRKG1Q13976 671 aa22.66■■□□□ 1.22
SKP2-204ENST00000508514 TTLL12Q14166 644 aaPredicted RBP22.66■■□□□ 1.22
SKP2-204ENST00000508514 RABL6Q3YEC7 729 aaPredicted RBP22.66■■□□□ 1.22
SKP2-204ENST00000508514 LDLRAD1Q5T700 205 aa22.66■■□□□ 1.22
SKP2-204ENST00000508514 REM2Q8IYK8 340 aaPredicted RBP22.66■■□□□ 1.22
SKP2-204ENST00000508514 ANKRD44Q8N8A2 993 aa22.66■■□□□ 1.22
SKP2-204ENST00000508514 DEFB129Q9H1M3 183 aa22.66■■□□□ 1.22
SKP2-204ENST00000508514 GYG1P46976 350 aa22.65■■□□□ 1.22
SKP2-204ENST00000508514 CFAP100Q494V2 611 aa22.65■■□□□ 1.22
SKP2-204ENST00000508514 TDRD7Q8NHU6 1098 aaKnown RBP22.65■■□□□ 1.22
SKP2-204ENST00000508514 SSH1Q8WYL5 1049 aa22.65■■□□□ 1.22
SKP2-204ENST00000508514 FAM84BQ96KN1 310 aaPredicted RBP22.65■■□□□ 1.22
SKP2-204ENST00000508514 BICC1Q9H694 974 aaKnown RBP22.65■■□□□ 1.22
SKP2-204ENST00000508514 SSC5DA1L4H1 1573 aa22.64■■□□□ 1.22
SKP2-204ENST00000508514 FAM205AQ6ZU69 1335 aa22.64■■□□□ 1.22
SKP2-204ENST00000508514 SPDYE2BA6NHP3 402 aa22.64■■□□□ 1.21
SKP2-204ENST00000508514 SPDYE6P0CI01 402 aa22.64■■□□□ 1.21
SKP2-204ENST00000508514 TM4SF4P48230 202 aa22.64■■□□□ 1.21
SKP2-204ENST00000508514 MKRN3Q13064 507 aaKnown RBP22.64■■□□□ 1.21
SKP2-204ENST00000508514 UBE4AQ14139 1066 aa22.64■■□□□ 1.21
SKP2-204ENST00000508514 AKAP11Q9UKA4 1901 aa22.64■■□□□ 1.21
SKP2-204ENST00000508514 CLRN2A0PK11 232 aa22.63■■□□□ 1.21
SKP2-204ENST00000508514 NF2P35240 595 aa22.63■■□□□ 1.21
SKP2-204ENST00000508514 SLFN5Q08AF3 891 aa22.63■■□□□ 1.21
SKP2-204ENST00000508514 LRRC24Q50LG9 513 aa22.63■■□□□ 1.21
SKP2-204ENST00000508514 TBC1D8O95759 1140 aa22.62■■□□□ 1.21
SKP2-204ENST00000508514 CDCA7LQ96GN5 454 aa22.62■■□□□ 1.21
SKP2-204ENST00000508514 USP44Q9H0E7 712 aa22.62■■□□□ 1.21
SKP2-204ENST00000508514 E9PSI1 815 aa22.61■■□□□ 1.21
SKP2-204ENST00000508514 HIBADHP31937 336 aaKnown RBP22.61■■□□□ 1.21
SKP2-204ENST00000508514 GRIK5Q16478 980 aa22.61■■□□□ 1.21
SKP2-204ENST00000508514 ARMC9Q7Z3E5 817 aa22.61■■□□□ 1.21
SKP2-204ENST00000508514 ANGEL1Q9UNK9 670 aaKnown RBP22.61■■□□□ 1.21
SKP2-204ENST00000508514 MAP3K11Q16584 847 aa22.6■■□□□ 1.21
SKP2-204ENST00000508514 FBXO33Q7Z6M2 555 aa22.6■■□□□ 1.21
SKP2-204ENST00000508514 VGLL2Q8N8G2 317 aa22.6■■□□□ 1.21
SKP2-204ENST00000508514 KLHDC4Q8TBB5 520 aa22.6■■□□□ 1.21
SKP2-204ENST00000508514 R3HDMLQ9H3Y0 253 aa22.6■■□□□ 1.21
SKP2-204ENST00000508514 COL1A1P02452 1464 aaPredicted RBP22.6■■□□□ 1.21
SKP2-204ENST00000508514 PTPRCP08575 1304 aa22.59■■□□□ 1.21
SKP2-204ENST00000508514 MFSD14BQ5SR56 506 aa22.59■■□□□ 1.21
SKP2-204ENST00000508514 NBPF12Q5TAG4 269 aaPredicted RBP22.59■■□□□ 1.21
SKP2-204ENST00000508514 SPRYD7Q5W111 196 aa22.59■■□□□ 1.21
SKP2-204ENST00000508514 CLMNQ96JQ2 1002 aa22.59■■□□□ 1.21
SKP2-204ENST00000508514 MROH5Q6ZUA9 1318 aa22.58■■□□□ 1.21
SKP2-204ENST00000508514 TRMT2AQ8IZ69 625 aaKnown RBP22.58■■□□□ 1.21
SKP2-204ENST00000508514 ZNF296Q8WUU4 475 aaPredicted RBP22.57■■□□□ 1.2
SKP2-204ENST00000508514 VEZTQ9HBM0 779 aa22.57■■□□□ 1.2
SKP2-204ENST00000508514 IQSEC3Q9UPP2 1182 aaPredicted RBP22.57■■□□□ 1.2
SKP2-204ENST00000508514 PPP2R3BQ9Y5P8 575 aa22.57■■□□□ 1.2
SKP2-204ENST00000508514 MLLT1Q03111 559 aaPredicted RBP22.56■■□□□ 1.2
SKP2-204ENST00000508514 RASA3Q14644 834 aa22.56■■□□□ 1.2
SKP2-204ENST00000508514 CTU1Q7Z7A3 348 aaKnown RBP22.56■■□□□ 1.2
SKP2-204ENST00000508514 CDAN1Q8IWY9 1227 aa22.56■■□□□ 1.2
SKP2-204ENST00000508514 TTF2Q9UNY4 1162 aaKnown RBP22.56■■□□□ 1.2
SKP2-204ENST00000508514 ECM29Q5VYK3 1845 aa22.55■■□□□ 1.2
SKP2-204ENST00000508514 MYO1BO43795 1136 aa22.55■■□□□ 1.2
SKP2-204ENST00000508514 USP2O75604 605 aaPredicted RBP22.55■■□□□ 1.2
SKP2-204ENST00000508514 PDE8BO95263 885 aa22.55■■□□□ 1.2
SKP2-204ENST00000508514 RFX5P48382 616 aaPredicted RBP22.55■■□□□ 1.2
SKP2-204ENST00000508514 RBM5P52756 815 aaKnown RBP eCLIP22.55■■□□□ 1.2
SKP2-204ENST00000508514 SPDYE2Q495Y8 402 aa22.55■■□□□ 1.2
SKP2-204ENST00000508514 TDRD3Q9H7E2 651 aaKnown RBP22.55■■□□□ 1.2
SKP2-204ENST00000508514 ZNF70Q9UC06 446 aaPredicted RBP22.55■■□□□ 1.2
SKP2-204ENST00000508514 SERPINA10Q9UK55 444 aa22.55■■□□□ 1.2
SKP2-204ENST00000508514 METTL24Q5JXM2 366 aa22.54■■□□□ 1.2
SKP2-204ENST00000508514 SLC10A4Q96EP9 437 aa22.54■■□□□ 1.2
SKP2-204ENST00000508514 TEPSINQ96N21 525 aa22.54■■□□□ 1.2
SKP2-204ENST00000508514 CFHR5Q9BXR6 569 aa22.54■■□□□ 1.2
SKP2-204ENST00000508514 GPR25O00155 361 aa22.53■■□□□ 1.2
SKP2-204ENST00000508514 FGFR2P21802 821 aa22.53■■□□□ 1.2
SKP2-204ENST00000508514 GJA5P36382 358 aa22.53■■□□□ 1.2
SKP2-204ENST00000508514 BCAMP50895 628 aa22.53■■□□□ 1.2
SKP2-204ENST00000508514 SUPT20HL1Q3ZLR7 823 aa22.53■■□□□ 1.2
SKP2-204ENST00000508514 DZIP1LQ8IYY4 767 aaKnown RBP22.53■■□□□ 1.2
SKP2-204ENST00000508514 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.53■■□□□ 1.2
SKP2-204ENST00000508514 PPP1R12BO60237 982 aaPredicted RBP22.52■■□□□ 1.2
SKP2-204ENST00000508514 CRKP46108 304 aa22.52■■□□□ 1.2
SKP2-204ENST00000508514 SREBF2Q12772 1141 aa22.52■■□□□ 1.2
SKP2-204ENST00000508514 ALDH1L2Q3SY69 923 aa22.52■■□□□ 1.2
SKP2-204ENST00000508514 NOM1Q5C9Z4 860 aaKnown RBP22.52■■□□□ 1.2
SKP2-204ENST00000508514 WNK4Q96J92 1243 aa22.52■■□□□ 1.2
SKP2-204ENST00000508514 CHAF1AQ13111 956 aaPredicted RBP22.5■■□□□ 1.19
SKP2-204ENST00000508514 IFNL1Q8IU54 200 aa22.5■■□□□ 1.19
SKP2-204ENST00000508514 UNCXA6NJT0 531 aa22.49■■□□□ 1.19
SKP2-204ENST00000508514 IGF2BP3O00425 579 aaKnown RBP eCLIP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms