RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 SRGAP3O43295 1099 aa11.69□□□□□ -0.54
DDX41-209ENST00000508279 SASH1O94885 1247 aa11.69□□□□□ -0.54
DDX41-209ENST00000508279 GNAI2P04899 355 aa11.69□□□□□ -0.54
DDX41-209ENST00000508279 IFIT1P09914 478 aaKnown RBP11.69□□□□□ -0.54
DDX41-209ENST00000508279 NBPF9Q3BBW0 867 aa11.69□□□□□ -0.54
DDX41-209ENST00000508279 DZIP1LQ8IYY4 767 aaKnown RBP11.69□□□□□ -0.54
DDX41-209ENST00000508279 FAM84BQ96KN1 310 aaPredicted RBP11.69□□□□□ -0.54
DDX41-209ENST00000508279 SLC5A1P13866 664 aa11.68□□□□□ -0.54
DDX41-209ENST00000508279 VEGFBP49765 207 aa11.68□□□□□ -0.54
DDX41-209ENST00000508279 BCAMP50895 628 aa11.68□□□□□ -0.54
DDX41-209ENST00000508279 RBM5P52756 815 aaKnown RBP eCLIP11.68□□□□□ -0.54
DDX41-209ENST00000508279 PUM3Q15397 648 aaKnown RBP11.68□□□□□ -0.54
DDX41-209ENST00000508279 ATG9AQ7Z3C6 839 aa11.68□□□□□ -0.54
DDX41-209ENST00000508279 CERS5Q8N5B7 392 aa11.68□□□□□ -0.54
DDX41-209ENST00000508279 VGLL2Q8N8G2 317 aa11.68□□□□□ -0.54
DDX41-209ENST00000508279 C1orf115Q9H7X2 142 aa11.68□□□□□ -0.54
DDX41-209ENST00000508279 CEP126Q9P2H0 1117 aa11.68□□□□□ -0.54
DDX41-209ENST00000508279 ZNF609O15014 1411 aa11.68□□□□□ -0.54
DDX41-209ENST00000508279 WNT10BO00744 389 aa11.67□□□□□ -0.54
DDX41-209ENST00000508279 RLBP1P12271 317 aa11.67□□□□□ -0.54
DDX41-209ENST00000508279 DLGAP5Q15398 846 aa11.67□□□□□ -0.54
DDX41-209ENST00000508279 MFSD14BQ5SR56 506 aa11.67□□□□□ -0.54
DDX41-209ENST00000508279 CYP4F22Q6NT55 531 aa11.67□□□□□ -0.54
DDX41-209ENST00000508279 JMYQ8N9B5 988 aa11.67□□□□□ -0.54
DDX41-209ENST00000508279 TDRD7Q8NHU6 1098 aaKnown RBP11.67□□□□□ -0.54
DDX41-209ENST00000508279 PANK1Q8TE04 598 aa11.67□□□□□ -0.54
DDX41-209ENST00000508279 ECM29Q5VYK3 1845 aa11.67□□□□□ -0.54
DDX41-209ENST00000508279 RASSF10A6NK89 507 aa11.66□□□□□ -0.54
DDX41-209ENST00000508279 CIAO1O76071 339 aa11.66□□□□□ -0.54
DDX41-209ENST00000508279 HSPA1AP0DMV8 641 aaKnown RBP11.66□□□□□ -0.54
DDX41-209ENST00000508279 HSPA1BP0DMV9 641 aaKnown RBP11.66□□□□□ -0.54
DDX41-209ENST00000508279 IL15P40933 162 aaPredicted RBP11.66□□□□□ -0.54
DDX41-209ENST00000508279 ATP2B3Q16720 1220 aa11.66□□□□□ -0.54
DDX41-209ENST00000508279 CFAP100Q494V2 611 aa11.66□□□□□ -0.54
DDX41-209ENST00000508279 PRAMEF18Q5VWM3 479 aa11.66□□□□□ -0.54
DDX41-209ENST00000508279 FBXO33Q7Z6M2 555 aa11.66□□□□□ -0.54
DDX41-209ENST00000508279 LPIN2Q92539 896 aa11.66□□□□□ -0.54
DDX41-209ENST00000508279 CDCA5Q96FF9 252 aa11.66□□□□□ -0.54
DDX41-209ENST00000508279 YTHDC1Q96MU7 727 aaKnown RBP11.66□□□□□ -0.54
DDX41-209ENST00000508279 PCDHAC2Q9Y5I4 1007 aa11.66□□□□□ -0.54
DDX41-209ENST00000508279 TLL2Q9Y6L7 1015 aa11.66□□□□□ -0.54
DDX41-209ENST00000508279 ARAP2Q8WZ64 1704 aa11.66□□□□□ -0.54
DDX41-209ENST00000508279 WDR33Q9C0J8 1336 aaKnown RBP11.65□□□□□ -0.54
DDX41-209ENST00000508279 PNMA6EA0A0J9YXQ4 647 aa11.65□□□□□ -0.54
DDX41-209ENST00000508279 FGFR2P21802 821 aa11.65□□□□□ -0.54
DDX41-209ENST00000508279 HUNKP57058 714 aa11.65□□□□□ -0.54
DDX41-209ENST00000508279 PPP4R3CPQ6ZMV5 832 aa11.65□□□□□ -0.54
DDX41-209ENST00000508279 C2orf69Q8N8R5 385 aa11.65□□□□□ -0.54
DDX41-209ENST00000508279 CAPNS2Q96L46 248 aa11.65□□□□□ -0.54
DDX41-209ENST00000508279 GBA2Q9HCG7 927 aaPredicted RBP11.65□□□□□ -0.54
DDX41-209ENST00000508279 COPRSQ9NQ92 184 aa11.65□□□□□ -0.54
DDX41-209ENST00000508279 RCAN3Q9UKA8 241 aa11.65□□□□□ -0.54
DDX41-209ENST00000508279 TTF2Q9UNY4 1162 aaKnown RBP11.65□□□□□ -0.54
DDX41-209ENST00000508279 PCNTO95613 3336 aa11.65□□□□□ -0.54
DDX41-209ENST00000508279 FAM205AQ6ZU69 1335 aa11.64□□□□□ -0.55
DDX41-209ENST00000508279 CLRN2A0PK11 232 aa11.64□□□□□ -0.55
DDX41-209ENST00000508279 MYO1BO43795 1136 aa11.64□□□□□ -0.55
DDX41-209ENST00000508279 ECE1P42892 770 aa11.64□□□□□ -0.55
DDX41-209ENST00000508279 FKBP1AP62942 108 aaKnown RBP11.64□□□□□ -0.55
DDX41-209ENST00000508279 TFCP2Q12800 502 aa11.64□□□□□ -0.55
DDX41-209ENST00000508279 G3BP1Q13283 466 aaKnown RBP eCLIP11.64□□□□□ -0.55
DDX41-209ENST00000508279 OS9Q13438 667 aaPredicted RBP11.64□□□□□ -0.55
DDX41-209ENST00000508279 TTLL12Q14166 644 aaPredicted RBP11.64□□□□□ -0.55
DDX41-209ENST00000508279 SAPCD2Q86UD0 394 aa11.64□□□□□ -0.55
DDX41-209ENST00000508279 VEZTQ9HBM0 779 aa11.64□□□□□ -0.55
DDX41-209ENST00000508279 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.64□□□□□ -0.55
DDX41-209ENST00000508279 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
DDX41-209ENST00000508279 PITPNM2Q9BZ72 1349 aa11.63□□□□□ -0.55
DDX41-209ENST00000508279 AOC2O75106 756 aa11.63□□□□□ -0.55
DDX41-209ENST00000508279 ADORA1P30542 326 aa11.63□□□□□ -0.55
DDX41-209ENST00000508279 MMP14P50281 582 aa11.63□□□□□ -0.55
DDX41-209ENST00000508279 TIMM10P62072 90 aa11.63□□□□□ -0.55
DDX41-209ENST00000508279 PRKG1Q13976 671 aa11.63□□□□□ -0.55
DDX41-209ENST00000508279 GRIK5Q16478 980 aa11.63□□□□□ -0.55
DDX41-209ENST00000508279 NEUROD6Q96NK8 337 aa11.63□□□□□ -0.55
DDX41-209ENST00000508279 ZBTB7BO15156 539 aaPredicted RBP11.62□□□□□ -0.55
DDX41-209ENST00000508279 NF2P35240 595 aa11.62□□□□□ -0.55
DDX41-209ENST00000508279 PHKA1P46020 1223 aa11.62□□□□□ -0.55
DDX41-209ENST00000508279 CACNB1Q02641 598 aaPredicted RBP11.62□□□□□ -0.55
DDX41-209ENST00000508279 MTX1Q13505 466 aa11.62□□□□□ -0.55
DDX41-209ENST00000508279 MOB2Q70IA6 237 aa11.62□□□□□ -0.55
DDX41-209ENST00000508279 APOBEC3FQ8IUX4 373 aaKnown RBP11.62□□□□□ -0.55
DDX41-209ENST00000508279 TBC1D22AQ8WUA7 517 aa11.62□□□□□ -0.55
DDX41-209ENST00000508279 AIDAQ96BJ3 306 aa11.62□□□□□ -0.55
DDX41-209ENST00000508279 PRMT6Q96LA8 375 aaPredicted RBP11.62□□□□□ -0.55
DDX41-209ENST00000508279 GNL3LQ9NVN8 582 aaKnown RBP11.62□□□□□ -0.55
DDX41-209ENST00000508279 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
DDX41-209ENST00000508279 AK9Q5TCS8 1911 aa11.62□□□□□ -0.55
DDX41-209ENST00000508279 AOX1Q06278 1338 aa11.61□□□□□ -0.55
DDX41-209ENST00000508279 A0A1B0GUL7 405 aa11.61□□□□□ -0.55
DDX41-209ENST00000508279 SPDYE2BA6NHP3 402 aa11.61□□□□□ -0.55
DDX41-209ENST00000508279 SPDYE6P0CI01 402 aa11.61□□□□□ -0.55
DDX41-209ENST00000508279 MS4A1P11836 297 aa11.61□□□□□ -0.55
DDX41-209ENST00000508279 CRKP46108 304 aa11.61□□□□□ -0.55
DDX41-209ENST00000508279 ZNF157P51786 506 aaPredicted RBP11.61□□□□□ -0.55
DDX41-209ENST00000508279 ATP8B2P98198 1209 aa11.61□□□□□ -0.55
DDX41-209ENST00000508279 GORABQ5T7V8 394 aa11.61□□□□□ -0.55
DDX41-209ENST00000508279 ZBED3Q96IU2 234 aaPredicted RBP11.61□□□□□ -0.55
DDX41-209ENST00000508279 BCL11AQ9H165 835 aa11.61□□□□□ -0.55
DDX41-209ENST00000508279 TDRD3Q9H7E2 651 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms