RNA–Protein interactions for RNA: ENST00000507459.5

CCHCR1-222, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5

Gene CCHCR1, Length 582 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-222ENST00000507459 CIAO1O76071 339 aa17.6■□□□□ 0.41
CCHCR1-222ENST00000507459 IFIT1P09914 478 aaKnown RBP17.6■□□□□ 0.41
CCHCR1-222ENST00000507459 BCAMP50895 628 aa17.6■□□□□ 0.41
CCHCR1-222ENST00000507459 NBPF9Q3BBW0 867 aa17.6■□□□□ 0.41
CCHCR1-222ENST00000507459 FBXO33Q7Z6M2 555 aa17.6■□□□□ 0.41
CCHCR1-222ENST00000507459 SULF1Q8IWU6 871 aa17.6■□□□□ 0.41
CCHCR1-222ENST00000507459 PANK1Q8TE04 598 aa17.6■□□□□ 0.41
CCHCR1-222ENST00000507459 COPRSQ9NQ92 184 aa17.6■□□□□ 0.41
CCHCR1-222ENST00000507459 FBXO3Q9UK99 471 aa17.6■□□□□ 0.41
CCHCR1-222ENST00000507459 ZNF646O15015 1829 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-222ENST00000507459 SLC5A1P13866 664 aa17.59■□□□□ 0.41
CCHCR1-222ENST00000507459 FGFR2P21802 821 aa17.59■□□□□ 0.41
CCHCR1-222ENST00000507459 IL15P40933 162 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-222ENST00000507459 CHAF1AQ13111 956 aaPredicted RBP17.59■□□□□ 0.41
CCHCR1-222ENST00000507459 C1orf115Q9H7X2 142 aa17.59■□□□□ 0.41
CCHCR1-222ENST00000507459 RCAN3Q9UKA8 241 aa17.59■□□□□ 0.41
CCHCR1-222ENST00000507459 SCAF8Q9UPN6 1271 aaKnown RBP17.59■□□□□ 0.41
CCHCR1-222ENST00000507459 CNTNAP1P78357 1384 aa17.58■□□□□ 0.4
CCHCR1-222ENST00000507459 MTX1Q13505 466 aa17.58■□□□□ 0.4
CCHCR1-222ENST00000507459 DEFB115Q30KQ5 88 aa17.58■□□□□ 0.4
CCHCR1-222ENST00000507459 MFSD14BQ5SR56 506 aa17.58■□□□□ 0.4
CCHCR1-222ENST00000507459 PAXIP1Q6ZW49 1069 aaPredicted RBP17.58■□□□□ 0.4
CCHCR1-222ENST00000507459 LPIN2Q92539 896 aa17.58■□□□□ 0.4
CCHCR1-222ENST00000507459 TRPM7Q96QT4 1865 aa17.58■□□□□ 0.4
CCHCR1-222ENST00000507459 FAM205AQ6ZU69 1335 aa17.57■□□□□ 0.4
CCHCR1-222ENST00000507459 PNMA6EA0A0J9YXQ4 647 aa17.57■□□□□ 0.4
CCHCR1-222ENST00000507459 WNT10BO00744 389 aa17.57■□□□□ 0.4
CCHCR1-222ENST00000507459 FKBP1AP62942 108 aaKnown RBP17.57■□□□□ 0.4
CCHCR1-222ENST00000507459 ATP2B3Q16720 1220 aa17.57■□□□□ 0.4
CCHCR1-222ENST00000507459 JMYQ8N9B5 988 aa17.57■□□□□ 0.4
CCHCR1-222ENST00000507459 RASSF10A6NK89 507 aa17.56■□□□□ 0.4
CCHCR1-222ENST00000507459 ZBTB7BO15156 539 aaPredicted RBP17.56■□□□□ 0.4
CCHCR1-222ENST00000507459 VEGFBP49765 207 aa17.56■□□□□ 0.4
CCHCR1-222ENST00000507459 MMP14P50281 582 aa17.56■□□□□ 0.4
CCHCR1-222ENST00000507459 RBM5P52756 815 aaKnown RBP eCLIP17.56■□□□□ 0.4
CCHCR1-222ENST00000507459 GRM1Q13255 1194 aa17.56■□□□□ 0.4
CCHCR1-222ENST00000507459 DLGAP5Q15398 846 aa17.56■□□□□ 0.4
CCHCR1-222ENST00000507459 YTHDC1Q96MU7 727 aaKnown RBP17.56■□□□□ 0.4
CCHCR1-222ENST00000507459 MS4A1P11836 297 aa17.55■□□□□ 0.4
CCHCR1-222ENST00000507459 TTF2Q9UNY4 1162 aaKnown RBP17.55■□□□□ 0.4
CCHCR1-222ENST00000507459 PCDHAC2Q9Y5I4 1007 aa17.55■□□□□ 0.4
CCHCR1-222ENST00000507459 TLL2Q9Y6L7 1015 aa17.55■□□□□ 0.4
CCHCR1-222ENST00000507459 PCNTO95613 3336 aa17.54■□□□□ 0.4
CCHCR1-222ENST00000507459 TFCP2Q12800 502 aa17.54■□□□□ 0.4
CCHCR1-222ENST00000507459 G3BP1Q13283 466 aaKnown RBP eCLIP17.54■□□□□ 0.4
CCHCR1-222ENST00000507459 CFAP100Q494V2 611 aa17.54■□□□□ 0.4
CCHCR1-222ENST00000507459 CDCA5Q96FF9 252 aa17.54■□□□□ 0.4
CCHCR1-222ENST00000507459 PITPNM2Q9BZ72 1349 aa17.53■□□□□ 0.4
CCHCR1-222ENST00000507459 TIMM10P62072 90 aa17.53■□□□□ 0.4
CCHCR1-222ENST00000507459 ATP8B2P98198 1209 aa17.53■□□□□ 0.4
CCHCR1-222ENST00000507459 PRAMEF18Q5VWM3 479 aa17.53■□□□□ 0.4
CCHCR1-222ENST00000507459 SAPCD2Q86UD0 394 aa17.53■□□□□ 0.4
CCHCR1-222ENST00000507459 ZBED3Q96IU2 234 aaPredicted RBP17.53■□□□□ 0.4
CCHCR1-222ENST00000507459 ADORA1P30542 326 aa17.52■□□□□ 0.4
CCHCR1-222ENST00000507459 GRIK5Q16478 980 aa17.52■□□□□ 0.4
CCHCR1-222ENST00000507459 CYP4F22Q6NT55 531 aa17.52■□□□□ 0.4
CCHCR1-222ENST00000507459 C2orf69Q8N8R5 385 aa17.52■□□□□ 0.4
CCHCR1-222ENST00000507459 TBC1D22AQ8WUA7 517 aa17.52■□□□□ 0.4
CCHCR1-222ENST00000507459 GBA2Q9HCG7 927 aaPredicted RBP17.52■□□□□ 0.4
CCHCR1-222ENST00000507459 COG6Q9Y2V7 657 aa17.52■□□□□ 0.4
CCHCR1-222ENST00000507459 WDR33Q9C0J8 1336 aaKnown RBP17.51■□□□□ 0.39
CCHCR1-222ENST00000507459 CLRN2A0PK11 232 aa17.51■□□□□ 0.39
CCHCR1-222ENST00000507459 HUNKP57058 714 aa17.51■□□□□ 0.39
CCHCR1-222ENST00000507459 OS9Q13438 667 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-222ENST00000507459 MTMR14Q8NCE2 650 aa17.51■□□□□ 0.39
CCHCR1-222ENST00000507459 CAPNS2Q96L46 248 aa17.51■□□□□ 0.39
CCHCR1-222ENST00000507459 PRMT6Q96LA8 375 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-222ENST00000507459 NEUROD6Q96NK8 337 aa17.51■□□□□ 0.39
CCHCR1-222ENST00000507459 GNL3LQ9NVN8 582 aaKnown RBP17.51■□□□□ 0.39
CCHCR1-222ENST00000507459 AKAP2Q9Y2D5 859 aa17.51■□□□□ 0.39
CCHCR1-222ENST00000507459 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.51■□□□□ 0.39
CCHCR1-222ENST00000507459 A0A1B0GUL7 405 aa17.5■□□□□ 0.39
CCHCR1-222ENST00000507459 SPDYE2BA6NHP3 402 aa17.5■□□□□ 0.39
CCHCR1-222ENST00000507459 MYO1BO43795 1136 aa17.5■□□□□ 0.39
CCHCR1-222ENST00000507459 SURF6O75683 361 aaKnown RBP17.5■□□□□ 0.39
CCHCR1-222ENST00000507459 SPDYE6P0CI01 402 aa17.5■□□□□ 0.39
CCHCR1-222ENST00000507459 ECE1P42892 770 aa17.5■□□□□ 0.39
CCHCR1-222ENST00000507459 PHKA1P46020 1223 aa17.5■□□□□ 0.39
CCHCR1-222ENST00000507459 POLA2Q14181 598 aa17.5■□□□□ 0.39
CCHCR1-222ENST00000507459 MVPQ14764 893 aaKnown RBP17.5■□□□□ 0.39
CCHCR1-222ENST00000507459 APOBEC3FQ8IUX4 373 aaKnown RBP17.5■□□□□ 0.39
CCHCR1-222ENST00000507459 SSH3Q8TE77 659 aa17.5■□□□□ 0.39
CCHCR1-222ENST00000507459 HSPA1AP0DMV8 641 aaKnown RBP17.49■□□□□ 0.39
CCHCR1-222ENST00000507459 HSPA1BP0DMV9 641 aaKnown RBP17.49■□□□□ 0.39
CCHCR1-222ENST00000507459 CRKP46108 304 aa17.49■□□□□ 0.39
CCHCR1-222ENST00000507459 CCDC102BQ68D86 513 aa17.49■□□□□ 0.39
CCHCR1-222ENST00000507459 WDR66Q8TBY9 1149 aa17.49■□□□□ 0.39
CCHCR1-222ENST00000507459 XAGE2Q96GT9 111 aa17.49■□□□□ 0.39
CCHCR1-222ENST00000507459 VEZTQ9HBM0 779 aa17.49■□□□□ 0.39
CCHCR1-222ENST00000507459 SERPINA10Q9UK55 444 aa17.49■□□□□ 0.39
CCHCR1-222ENST00000507459 AOX1Q06278 1338 aa17.48■□□□□ 0.39
CCHCR1-222ENST00000507459 CEP85Q6P2H3 762 aa17.48■□□□□ 0.39
CCHCR1-222ENST00000507459 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.48■□□□□ 0.39
CCHCR1-222ENST00000507459 DDX19BQ9UMR2 479 aa17.48■□□□□ 0.39
CCHCR1-222ENST00000507459 AOC2O75106 756 aa17.47■□□□□ 0.39
CCHCR1-222ENST00000507459 TTLL12Q14166 644 aaPredicted RBP17.47■□□□□ 0.39
CCHCR1-222ENST00000507459 GORABQ5T7V8 394 aa17.47■□□□□ 0.39
CCHCR1-222ENST00000507459 C20orf194Q5TEA3 1177 aa17.47■□□□□ 0.39
CCHCR1-222ENST00000507459 TDRD3Q9H7E2 651 aaKnown RBP17.47■□□□□ 0.39
CCHCR1-222ENST00000507459 DENND2AQ9ULE3 1009 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms