RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 TBC1D8O95759 1140 aa20.58■□□□□ 0.89
SNX2-205ENST00000506874 PTPN12Q05209 780 aaKnown RBP20.58■□□□□ 0.89
SNX2-205ENST00000506874 CCDC57Q2TAC2 916 aa20.58■□□□□ 0.89
SNX2-205ENST00000506874 SLC4A10Q6U841 1118 aa20.58■□□□□ 0.89
SNX2-205ENST00000506874 ZNF804AQ7Z570 1209 aa20.58■□□□□ 0.89
SNX2-205ENST00000506874 CTU1Q7Z7A3 348 aaKnown RBP20.58■□□□□ 0.89
SNX2-205ENST00000506874 C9orf78Q9NZ63 289 aaPredicted RBP20.58■□□□□ 0.89
SNX2-205ENST00000506874 FZD1Q9UP38 647 aa20.58■□□□□ 0.89
SNX2-205ENST00000506874 PCDHAC2Q9Y5I4 1007 aa20.58■□□□□ 0.89
SNX2-205ENST00000506874 GRM8O00222 908 aa20.57■□□□□ 0.88
SNX2-205ENST00000506874 SOX10P56693 466 aa20.57■□□□□ 0.88
SNX2-205ENST00000506874 LDHAL6AQ6ZMR3 332 aa20.57■□□□□ 0.88
SNX2-205ENST00000506874 CNNM1Q9NRU3 951 aa20.57■□□□□ 0.88
SNX2-205ENST00000506874 ANGEL1Q9UNK9 670 aaKnown RBP20.57■□□□□ 0.88
SNX2-205ENST00000506874 C15orf52Q6ZUT6 534 aaKnown RBP20.56■□□□□ 0.88
SNX2-205ENST00000506874 IL1R1P14778 569 aa20.55■□□□□ 0.88
SNX2-205ENST00000506874 CFAP100Q494V2 611 aa20.55■□□□□ 0.88
SNX2-205ENST00000506874 DEFB129Q9H1M3 183 aa20.55■□□□□ 0.88
SNX2-205ENST00000506874 CLRN2A0PK11 232 aa20.54■□□□□ 0.88
SNX2-205ENST00000506874 TM4SF4P48230 202 aa20.54■□□□□ 0.88
SNX2-205ENST00000506874 ZNF296Q8WUU4 475 aaPredicted RBP20.54■□□□□ 0.88
SNX2-205ENST00000506874 RBM5P52756 815 aaKnown RBP eCLIP20.53■□□□□ 0.88
SNX2-205ENST00000506874 SRCIN1Q9C0H9 1055 aa20.53■□□□□ 0.88
SNX2-205ENST00000506874 VEZTQ9HBM0 779 aa20.53■□□□□ 0.88
SNX2-205ENST00000506874 ECM29Q5VYK3 1845 aa20.53■□□□□ 0.88
SNX2-205ENST00000506874 MYO1BO43795 1136 aa20.52■□□□□ 0.88
SNX2-205ENST00000506874 ALDH1L1O75891 902 aa20.52■□□□□ 0.88
SNX2-205ENST00000506874 SREBF2Q12772 1141 aa20.52■□□□□ 0.88
SNX2-205ENST00000506874 LDLRAD1Q5T700 205 aa20.52■□□□□ 0.88
SNX2-205ENST00000506874 SPRYD7Q5W111 196 aa20.52■□□□□ 0.88
SNX2-205ENST00000506874 MTMR14Q8NCE2 650 aa20.52■□□□□ 0.88
SNX2-205ENST00000506874 PRMT6Q96LA8 375 aaPredicted RBP20.52■□□□□ 0.88
SNX2-205ENST00000506874 AOX1Q06278 1338 aa20.52■□□□□ 0.87
SNX2-205ENST00000506874 PDE4DIPQ5VU43 2346 aa20.52■□□□□ 0.87
SNX2-205ENST00000506874 COL1A1P02452 1464 aaPredicted RBP20.51■□□□□ 0.87
SNX2-205ENST00000506874 SPDYE2BA6NHP3 402 aa20.51■□□□□ 0.87
SNX2-205ENST00000506874 GPR25O00155 361 aa20.51■□□□□ 0.87
SNX2-205ENST00000506874 SPDYE6P0CI01 402 aa20.51■□□□□ 0.87
SNX2-205ENST00000506874 SLC10A4Q96EP9 437 aa20.51■□□□□ 0.87
SNX2-205ENST00000506874 SUCLG2Q96I99 432 aa20.51■□□□□ 0.87
SNX2-205ENST00000506874 PUS3Q9BZE2 481 aaKnown RBP20.51■□□□□ 0.87
SNX2-205ENST00000506874 GYG1P46976 350 aa20.5■□□□□ 0.87
SNX2-205ENST00000506874 FKBP1AP62942 108 aaKnown RBP20.5■□□□□ 0.87
SNX2-205ENST00000506874 R3HDMLQ9H3Y0 253 aa20.5■□□□□ 0.87
SNX2-205ENST00000506874 HPS5Q9UPZ3 1129 aa20.5■□□□□ 0.87
SNX2-205ENST00000506874 PPP1R12BO60237 982 aaPredicted RBP20.49■□□□□ 0.87
SNX2-205ENST00000506874 NBPF7P0C2Y1 421 aaPredicted RBP20.49■□□□□ 0.87
SNX2-205ENST00000506874 CLMNQ96JQ2 1002 aa20.49■□□□□ 0.87
SNX2-205ENST00000506874 SSC5DA1L4H1 1573 aa20.49■□□□□ 0.87
SNX2-205ENST00000506874 UBE4AQ14139 1066 aa20.48■□□□□ 0.87
SNX2-205ENST00000506874 MFSD14BQ5SR56 506 aa20.48■□□□□ 0.87
SNX2-205ENST00000506874 NBPF12Q5TAG4 269 aaPredicted RBP20.48■□□□□ 0.87
SNX2-205ENST00000506874 KAZALD1Q96I82 304 aa20.48■□□□□ 0.87
SNX2-205ENST00000506874 PPP2R3BQ9Y5P8 575 aa20.48■□□□□ 0.87
SNX2-205ENST00000506874 ZNF521Q96K83 1311 aa20.48■□□□□ 0.87
SNX2-205ENST00000506874 HIBADHP31937 336 aaKnown RBP20.47■□□□□ 0.87
SNX2-205ENST00000506874 SUPT20HL1Q3ZLR7 823 aa20.47■□□□□ 0.87
SNX2-205ENST00000506874 TDRD7Q8NHU6 1098 aaKnown RBP20.47■□□□□ 0.87
SNX2-205ENST00000506874 WNK4Q96J92 1243 aa20.47■□□□□ 0.87
SNX2-205ENST00000506874 FAM84BQ96KN1 310 aaPredicted RBP20.47■□□□□ 0.87
SNX2-205ENST00000506874 TTF2Q9UNY4 1162 aaKnown RBP20.47■□□□□ 0.87
SNX2-205ENST00000506874 FAM205AQ6ZU69 1335 aa20.47■□□□□ 0.87
SNX2-205ENST00000506874 TNRC18O15417 2968 aaPredicted RBP20.46■□□□□ 0.87
SNX2-205ENST00000506874 MANSC4A6NHS7 340 aaPredicted RBP20.46■□□□□ 0.87
SNX2-205ENST00000506874 FKTNO75072 461 aa20.46■□□□□ 0.87
SNX2-205ENST00000506874 RASA3Q14644 834 aa20.46■□□□□ 0.87
SNX2-205ENST00000506874 PKN2Q16513 984 aaKnown RBP20.46■□□□□ 0.87
SNX2-205ENST00000506874 MAP3K11Q16584 847 aa20.46■□□□□ 0.87
SNX2-205ENST00000506874 IQSEC3Q9UPP2 1182 aaPredicted RBP20.46■□□□□ 0.87
SNX2-205ENST00000506874 BICC1Q9H694 974 aaKnown RBP20.45■□□□□ 0.86
SNX2-205ENST00000506874 IREB2P48200 963 aaKnown RBP20.44■□□□□ 0.86
SNX2-205ENST00000506874 NOM1Q5C9Z4 860 aaKnown RBP20.44■□□□□ 0.86
SNX2-205ENST00000506874 IFNL1Q8IU54 200 aa20.44■□□□□ 0.86
SNX2-205ENST00000506874 MRPL50Q8N5N7 158 aaKnown RBP20.44■□□□□ 0.86
SNX2-205ENST00000506874 TDRD3Q9H7E2 651 aaKnown RBP20.44■□□□□ 0.86
SNX2-205ENST00000506874 ZNF70Q9UC06 446 aaPredicted RBP20.44■□□□□ 0.86
SNX2-205ENST00000506874 RIPOR2Q9Y4F9 1068 aa20.44■□□□□ 0.86
SNX2-205ENST00000506874 USP2O75604 605 aaPredicted RBP20.43■□□□□ 0.86
SNX2-205ENST00000506874 ALDH1A1P00352 501 aa20.43■□□□□ 0.86
SNX2-205ENST00000506874 ZBTB48P10074 688 aaPredicted RBP20.43■□□□□ 0.86
SNX2-205ENST00000506874 CHAF1AQ13111 956 aaPredicted RBP20.43■□□□□ 0.86
SNX2-205ENST00000506874 SPDYE2Q495Y8 402 aa20.43■□□□□ 0.86
SNX2-205ENST00000506874 LRRC24Q50LG9 513 aa20.43■□□□□ 0.86
SNX2-205ENST00000506874 METTL24Q5JXM2 366 aa20.43■□□□□ 0.86
SNX2-205ENST00000506874 VPS37DQ86XT2 251 aa20.43■□□□□ 0.86
SNX2-205ENST00000506874 CFHR5Q9BXR6 569 aa20.43■□□□□ 0.86
SNX2-205ENST00000506874 MROH5Q6ZUA9 1318 aa20.43■□□□□ 0.86
SNX2-205ENST00000506874 IGF2BP3O00425 579 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNX2-205ENST00000506874 INHBEP58166 350 aa20.42■□□□□ 0.86
SNX2-205ENST00000506874 FBXO46Q6PJ61 603 aaPredicted RBP20.42■□□□□ 0.86
SNX2-205ENST00000506874 DZIP1LQ8IYY4 767 aaKnown RBP20.42■□□□□ 0.86
SNX2-205ENST00000506874 ANKRD44Q8N8A2 993 aa20.42■□□□□ 0.86
SNX2-205ENST00000506874 SERPINA10Q9UK55 444 aa20.42■□□□□ 0.86
SNX2-205ENST00000506874 UTYO14607 1347 aa20.42■□□□□ 0.86
SNX2-205ENST00000506874 TCP10L2B9ZVM9 353 aa20.41■□□□□ 0.86
SNX2-205ENST00000506874 FRAT2O75474 233 aaPredicted RBP20.41■□□□□ 0.86
SNX2-205ENST00000506874 GJA5P36382 358 aa20.41■□□□□ 0.86
SNX2-205ENST00000506874 CRKP46108 304 aa20.41■□□□□ 0.86
SNX2-205ENST00000506874 TNFAIP1Q13829 316 aa20.41■□□□□ 0.86
SNX2-205ENST00000506874 GRIK5Q16478 980 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms