RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 MEIS3Q99687 375 aa13.52□□□□□ -0.25
SNCA-210ENST00000506691 MYOZ2Q9NPC6 264 aa13.52□□□□□ -0.25
SNCA-210ENST00000506691 ZBTB40Q9NUA8 1239 aa13.52□□□□□ -0.25
SNCA-210ENST00000506691 COL1A1P02452 1464 aaPredicted RBP13.52□□□□□ -0.25
SNCA-210ENST00000506691 MED23Q9ULK4 1368 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 USP17L3A6NCW0 530 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 USP17L4A6NCW7 530 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 G3V3G9 751 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 UFL1O94874 794 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 ATP2B4P23634 1241 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 SOX10P56693 466 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 INHBEP58166 350 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 IFIT5Q13325 482 aaKnown RBP13.51□□□□□ -0.25
SNCA-210ENST00000506691 MTX1Q13505 466 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 DOK7Q18PE1 504 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 RBM26Q5T8P6 1007 aaKnown RBP13.51□□□□□ -0.25
SNCA-210ENST00000506691 DCAF8Q5TAQ9 597 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 LMBR1LQ6UX01 489 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 USP17L1Q7RTZ2 530 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 JARID2Q92833 1246 aaPredicted RBP13.51□□□□□ -0.25
SNCA-210ENST00000506691 BICC1Q9H694 974 aaKnown RBP13.51□□□□□ -0.25
SNCA-210ENST00000506691 KCNQ5Q9NR82 932 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 ANKIB1Q9P2G1 1089 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 FBXO3Q9UK99 471 aa13.51□□□□□ -0.25
SNCA-210ENST00000506691 ANKRD18BA2A2Z9 1011 aa13.5□□□□□ -0.25
SNCA-210ENST00000506691 NF2P35240 595 aa13.5□□□□□ -0.25
SNCA-210ENST00000506691 C20orf194Q5TEA3 1177 aa13.5□□□□□ -0.25
SNCA-210ENST00000506691 DLK2Q6UY11 383 aa13.5□□□□□ -0.25
SNCA-210ENST00000506691 RPAP2Q8IXW5 612 aaPredicted RBP13.5□□□□□ -0.25
SNCA-210ENST00000506691 OGFOD1Q8N543 542 aa13.5□□□□□ -0.25
SNCA-210ENST00000506691 KAZALD1Q96I82 304 aa13.5□□□□□ -0.25
SNCA-210ENST00000506691 HDAC9Q9UKV0 1011 aa13.5□□□□□ -0.25
SNCA-210ENST00000506691 MYH3P11055 1940 aa13.5□□□□□ -0.25
SNCA-210ENST00000506691 COL4A1P02462 1669 aa13.5□□□□□ -0.25
SNCA-210ENST00000506691 ITGA6P23229 1130 aa13.49□□□□□ -0.25
SNCA-210ENST00000506691 IGHMBP2P38935 993 aaKnown RBP13.49□□□□□ -0.25
SNCA-210ENST00000506691 STRIP1Q5VSL9 837 aa13.49□□□□□ -0.25
SNCA-210ENST00000506691 ANKRD18AQ8IVF6 992 aa13.49□□□□□ -0.25
SNCA-210ENST00000506691 ZNF296Q8WUU4 475 aaPredicted RBP13.49□□□□□ -0.25
SNCA-210ENST00000506691 LRRFIP2Q9Y608 721 aaKnown RBP13.49□□□□□ -0.25
SNCA-210ENST00000506691 ZNF646O15015 1829 aaPredicted RBP13.48□□□□□ -0.25
SNCA-210ENST00000506691 RBBP6Q7Z6E9 1792 aaKnown RBP13.48□□□□□ -0.25
SNCA-210ENST00000506691 GPR25O00155 361 aa13.48□□□□□ -0.25
SNCA-210ENST00000506691 ATP8B2P98198 1209 aa13.48□□□□□ -0.25
SNCA-210ENST00000506691 EPHA10Q5JZY3 1008 aa13.48□□□□□ -0.25
SNCA-210ENST00000506691 ANKRD44Q8N8A2 993 aa13.48□□□□□ -0.25
SNCA-210ENST00000506691 MPHOSPH8Q99549 860 aa13.48□□□□□ -0.25
SNCA-210ENST00000506691 GREM2Q9H772 168 aa13.48□□□□□ -0.25
SNCA-210ENST00000506691 BSDC1Q9NW68 430 aaPredicted RBP13.48□□□□□ -0.25
SNCA-210ENST00000506691 FKTNO75072 461 aa13.47□□□□□ -0.25
SNCA-210ENST00000506691 HMMRO75330 724 aa13.47□□□□□ -0.25
SNCA-210ENST00000506691 MAP3K11Q16584 847 aa13.47□□□□□ -0.25
SNCA-210ENST00000506691 TAF7LQ5H9L4 462 aa13.47□□□□□ -0.25
SNCA-210ENST00000506691 DACT2Q5SW24 774 aa13.47□□□□□ -0.25
SNCA-210ENST00000506691 APOBEC3FQ8IUX4 373 aaKnown RBP13.47□□□□□ -0.25
SNCA-210ENST00000506691 COA1Q9GZY4 146 aa13.47□□□□□ -0.25
SNCA-210ENST00000506691 CHMP3Q9Y3E7 222 aa13.47□□□□□ -0.25
SNCA-210ENST00000506691 ASTN2O75129 1339 aaPredicted RBP13.46□□□□□ -0.25
SNCA-210ENST00000506691 WNT10BO00744 389 aa13.46□□□□□ -0.25
SNCA-210ENST00000506691 ZBTB48P10074 688 aaPredicted RBP13.46□□□□□ -0.25
SNCA-210ENST00000506691 LDLRAD1Q5T700 205 aa13.46□□□□□ -0.25
SNCA-210ENST00000506691 ARMC9Q7Z3E5 817 aa13.46□□□□□ -0.25
SNCA-210ENST00000506691 PPP2R3BQ9Y5P8 575 aa13.46□□□□□ -0.25
SNCA-210ENST00000506691 SRGAP3O43295 1099 aa13.45□□□□□ -0.26
SNCA-210ENST00000506691 SSH3Q8TE77 659 aa13.45□□□□□ -0.26
SNCA-210ENST00000506691 CRBNQ96SW2 442 aa13.45□□□□□ -0.26
SNCA-210ENST00000506691 COPRSQ9NQ92 184 aa13.45□□□□□ -0.26
SNCA-210ENST00000506691 SEC31BQ9NQW1 1179 aa13.45□□□□□ -0.26
SNCA-210ENST00000506691 LEMD3Q9Y2U8 911 aa13.45□□□□□ -0.26
SNCA-210ENST00000506691 MANSC4A6NHS7 340 aaPredicted RBP13.44□□□□□ -0.26
SNCA-210ENST00000506691 CIAO1O76071 339 aa13.44□□□□□ -0.26
SNCA-210ENST00000506691 NEFLP07196 543 aa13.44□□□□□ -0.26
SNCA-210ENST00000506691 POLA2Q14181 598 aa13.44□□□□□ -0.26
SNCA-210ENST00000506691 HSP90AB4PQ58FF6 505 aa13.44□□□□□ -0.26
SNCA-210ENST00000506691 CEP85Q6P2H3 762 aa13.44□□□□□ -0.26
SNCA-210ENST00000506691 LDHAL6AQ6ZMR3 332 aa13.44□□□□□ -0.26
SNCA-210ENST00000506691 MTMR14Q8NCE2 650 aa13.44□□□□□ -0.26
SNCA-210ENST00000506691 ZBED3Q96IU2 234 aaPredicted RBP13.44□□□□□ -0.26
SNCA-210ENST00000506691 ANKRD2Q9GZV1 360 aa13.44□□□□□ -0.26
SNCA-210ENST00000506691 TBC1D8O95759 1140 aa13.43□□□□□ -0.26
SNCA-210ENST00000506691 NBPF9Q3BBW0 867 aa13.43□□□□□ -0.26
SNCA-210ENST00000506691 ERICH6BQ5W0A0 696 aa13.43□□□□□ -0.26
SNCA-210ENST00000506691 CCDC85AQ96PX6 553 aaPredicted RBP13.43□□□□□ -0.26
SNCA-210ENST00000506691 MINPP1Q9UNW1 487 aa13.43□□□□□ -0.26
SNCA-210ENST00000506691 MROH5Q6ZUA9 1318 aa13.42□□□□□ -0.26
SNCA-210ENST00000506691 UBE2Q2LH0YL09 131 aa13.42□□□□□ -0.26
SNCA-210ENST00000506691 IL15P40933 162 aaPredicted RBP13.42□□□□□ -0.26
SNCA-210ENST00000506691 RFX5P48382 616 aaPredicted RBP13.42□□□□□ -0.26
SNCA-210ENST00000506691 PTPN12Q05209 780 aaKnown RBP13.42□□□□□ -0.26
SNCA-210ENST00000506691 SPRYD7Q5W111 196 aa13.42□□□□□ -0.26
SNCA-210ENST00000506691 CNNM1Q9NRU3 951 aa13.42□□□□□ -0.26
SNCA-210ENST00000506691 ECM29Q5VYK3 1845 aa13.41□□□□□ -0.26
SNCA-210ENST00000506691 EYA2O00167 538 aa13.41□□□□□ -0.26
SNCA-210ENST00000506691 FKBP1AP62942 108 aaKnown RBP13.41□□□□□ -0.26
SNCA-210ENST00000506691 G3BP1Q13283 466 aaKnown RBP eCLIP13.41□□□□□ -0.26
SNCA-210ENST00000506691 C15orf52Q6ZUT6 534 aaKnown RBP13.41□□□□□ -0.26
SNCA-210ENST00000506691 ERC1Q8IUD2 1116 aa13.41□□□□□ -0.26
SNCA-210ENST00000506691 NOP58Q9Y2X3 529 aaKnown RBP13.41□□□□□ -0.26
SNCA-210ENST00000506691 RIPOR2Q9Y4F9 1068 aa13.41□□□□□ -0.26
SNCA-210ENST00000506691 PNMA6EA0A0J9YXQ4 647 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms