RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 IFIT1P09914 478 aaKnown RBP19.35■□□□□ 0.69
MED28-204ENST00000506409 FKBP1AP62942 108 aaKnown RBP19.35■□□□□ 0.69
MED28-204ENST00000506409 MTX1Q13505 466 aa19.35■□□□□ 0.69
MED28-204ENST00000506409 FBXO33Q7Z6M2 555 aa19.35■□□□□ 0.69
MED28-204ENST00000506409 COPRSQ9NQ92 184 aa19.35■□□□□ 0.69
MED28-204ENST00000506409 PA2G4Q9UQ80 394 aaKnown RBP19.35■□□□□ 0.69
MED28-204ENST00000506409 FAM205AQ6ZU69 1335 aa19.34■□□□□ 0.69
MED28-204ENST00000506409 POLR2AP24928 1970 aaKnown RBP19.34■□□□□ 0.69
MED28-204ENST00000506409 RLBP1P12271 317 aa19.34■□□□□ 0.69
MED28-204ENST00000506409 FGFR2P21802 821 aa19.34■□□□□ 0.69
MED28-204ENST00000506409 IL15P40933 162 aaPredicted RBP19.34■□□□□ 0.69
MED28-204ENST00000506409 DEFB115Q30KQ5 88 aa19.34■□□□□ 0.69
MED28-204ENST00000506409 NBPF9Q3BBW0 867 aa19.34■□□□□ 0.69
MED28-204ENST00000506409 DLK2Q6UY11 383 aa19.34■□□□□ 0.69
MED28-204ENST00000506409 ITPRIPQ8IWB1 547 aa19.34■□□□□ 0.69
MED28-204ENST00000506409 CEP126Q9P2H0 1117 aa19.34■□□□□ 0.69
MED28-204ENST00000506409 PITPNM2Q9BZ72 1349 aa19.33■□□□□ 0.69
MED28-204ENST00000506409 F8W031 263 aaPredicted RBP19.33■□□□□ 0.68
MED28-204ENST00000506409 WNT10BO00744 389 aa19.33■□□□□ 0.68
MED28-204ENST00000506409 SLC5A1P13866 664 aa19.33■□□□□ 0.68
MED28-204ENST00000506409 LPIN2Q92539 896 aa19.33■□□□□ 0.68
MED28-204ENST00000506409 TLL2Q9Y6L7 1015 aa19.33■□□□□ 0.68
MED28-204ENST00000506409 FRAT2O75474 233 aaPredicted RBP19.32■□□□□ 0.68
MED28-204ENST00000506409 VEGFBP49765 207 aa19.32■□□□□ 0.68
MED28-204ENST00000506409 BCAMP50895 628 aa19.32■□□□□ 0.68
MED28-204ENST00000506409 MFSD14BQ5SR56 506 aa19.32■□□□□ 0.68
MED28-204ENST00000506409 IQSEC3Q9UPP2 1182 aaPredicted RBP19.32■□□□□ 0.68
MED28-204ENST00000506409 ATP2B3Q16720 1220 aa19.31■□□□□ 0.68
MED28-204ENST00000506409 PAXIP1Q6ZW49 1069 aaPredicted RBP19.31■□□□□ 0.68
MED28-204ENST00000506409 PCNTO95613 3336 aa19.31■□□□□ 0.68
MED28-204ENST00000506409 CHAF1AQ13111 956 aaPredicted RBP19.3■□□□□ 0.68
MED28-204ENST00000506409 DLGAP5Q15398 846 aa19.3■□□□□ 0.68
MED28-204ENST00000506409 SAPCD2Q86UD0 394 aa19.3■□□□□ 0.68
MED28-204ENST00000506409 RCAN3Q9UKA8 241 aa19.3■□□□□ 0.68
MED28-204ENST00000506409 PNMA6EA0A0J9YXQ4 647 aa19.29■□□□□ 0.68
MED28-204ENST00000506409 PANK1Q8TE04 598 aa19.29■□□□□ 0.68
MED28-204ENST00000506409 CDCA5Q96FF9 252 aa19.29■□□□□ 0.68
MED28-204ENST00000506409 ZBED3Q96IU2 234 aaPredicted RBP19.29■□□□□ 0.68
MED28-204ENST00000506409 SCAF8Q9UPN6 1271 aaKnown RBP19.29■□□□□ 0.68
MED28-204ENST00000506409 ZBTB7BO15156 539 aaPredicted RBP19.28■□□□□ 0.68
MED28-204ENST00000506409 MS4A1P11836 297 aa19.28■□□□□ 0.68
MED28-204ENST00000506409 CFAP100Q494V2 611 aa19.28■□□□□ 0.68
MED28-204ENST00000506409 MTMR14Q8NCE2 650 aa19.28■□□□□ 0.68
MED28-204ENST00000506409 TBC1D22AQ8WUA7 517 aa19.28■□□□□ 0.68
MED28-204ENST00000506409 C1orf115Q9H7X2 142 aa19.28■□□□□ 0.68
MED28-204ENST00000506409 GBA2Q9HCG7 927 aaPredicted RBP19.28■□□□□ 0.68
MED28-204ENST00000506409 TTF2Q9UNY4 1162 aaKnown RBP19.28■□□□□ 0.68
MED28-204ENST00000506409 WDR33Q9C0J8 1336 aaKnown RBP19.27■□□□□ 0.68
MED28-204ENST00000506409 ECE1P42892 770 aa19.27■□□□□ 0.68
MED28-204ENST00000506409 RBM5P52756 815 aaKnown RBP eCLIP19.27■□□□□ 0.68
MED28-204ENST00000506409 GRM1Q13255 1194 aa19.27■□□□□ 0.68
MED28-204ENST00000506409 CYP4F22Q6NT55 531 aa19.27■□□□□ 0.68
MED28-204ENST00000506409 C2orf69Q8N8R5 385 aa19.27■□□□□ 0.68
MED28-204ENST00000506409 CAPNS2Q96L46 248 aa19.27■□□□□ 0.68
MED28-204ENST00000506409 ARAP2Q8WZ64 1704 aa19.27■□□□□ 0.68
MED28-204ENST00000506409 SPDYE2BA6NHP3 402 aa19.26■□□□□ 0.67
MED28-204ENST00000506409 MYO1BO43795 1136 aa19.26■□□□□ 0.67
MED28-204ENST00000506409 SPDYE6P0CI01 402 aa19.26■□□□□ 0.67
MED28-204ENST00000506409 HSPA1AP0DMV8 641 aaKnown RBP19.26■□□□□ 0.67
MED28-204ENST00000506409 HSPA1BP0DMV9 641 aaKnown RBP19.26■□□□□ 0.67
MED28-204ENST00000506409 HUNKP57058 714 aa19.26■□□□□ 0.67
MED28-204ENST00000506409 APOBEC3FQ8IUX4 373 aaKnown RBP19.26■□□□□ 0.67
MED28-204ENST00000506409 HHIPL1Q96JK4 782 aa19.26■□□□□ 0.67
MED28-204ENST00000506409 PCDHAC2Q9Y5I4 1007 aa19.26■□□□□ 0.67
MED28-204ENST00000506409 TFCP2Q12800 502 aa19.25■□□□□ 0.67
MED28-204ENST00000506409 GNL3LQ9NVN8 582 aaKnown RBP19.25■□□□□ 0.67
MED28-204ENST00000506409 SERPINA10Q9UK55 444 aa19.25■□□□□ 0.67
MED28-204ENST00000506409 AKAP2Q9Y2D5 859 aa19.25■□□□□ 0.67
MED28-204ENST00000506409 ATP8B2P98198 1209 aa19.24■□□□□ 0.67
MED28-204ENST00000506409 G3BP1Q13283 466 aaKnown RBP eCLIP19.24■□□□□ 0.67
MED28-204ENST00000506409 POLA2Q14181 598 aa19.24■□□□□ 0.67
MED28-204ENST00000506409 GRIK5Q16478 980 aa19.24■□□□□ 0.67
MED28-204ENST00000506409 PRAMEF18Q5VWM3 479 aa19.24■□□□□ 0.67
MED28-204ENST00000506409 PRMT6Q96LA8 375 aaPredicted RBP19.24■□□□□ 0.67
MED28-204ENST00000506409 A0A1B0GUL7 405 aa19.23■□□□□ 0.67
MED28-204ENST00000506409 CLRN2A0PK11 232 aa19.23■□□□□ 0.67
MED28-204ENST00000506409 ADORA1P30542 326 aa19.23■□□□□ 0.67
MED28-204ENST00000506409 PHKA1P46020 1223 aa19.23■□□□□ 0.67
MED28-204ENST00000506409 TIMM10P62072 90 aa19.23■□□□□ 0.67
MED28-204ENST00000506409 WDR66Q8TBY9 1149 aa19.23■□□□□ 0.67
MED28-204ENST00000506409 SSH3Q8TE77 659 aa19.23■□□□□ 0.67
MED28-204ENST00000506409 COL1A1P02452 1464 aaPredicted RBP19.22■□□□□ 0.67
MED28-204ENST00000506409 MYH13Q9UKX3 1938 aa19.22■□□□□ 0.67
MED28-204ENST00000506409 CRKP46108 304 aa19.22■□□□□ 0.67
MED28-204ENST00000506409 SUGT1Q9Y2Z0 365 aa19.22■□□□□ 0.67
MED28-204ENST00000506409 ECM29Q5VYK3 1845 aa19.22■□□□□ 0.67
MED28-204ENST00000506409 SEMA3EO15041 775 aa19.21■□□□□ 0.67
MED28-204ENST00000506409 NF2P35240 595 aa19.21■□□□□ 0.67
MED28-204ENST00000506409 FKBP1BP68106 108 aa19.21■□□□□ 0.67
MED28-204ENST00000506409 HDLBPQ00341 1268 aaKnown RBP19.21■□□□□ 0.67
MED28-204ENST00000506409 OS9Q13438 667 aaPredicted RBP19.21■□□□□ 0.67
MED28-204ENST00000506409 MVPQ14764 893 aaKnown RBP19.21■□□□□ 0.67
MED28-204ENST00000506409 CCDC102BQ68D86 513 aa19.21■□□□□ 0.67
MED28-204ENST00000506409 XAGE2Q96GT9 111 aa19.21■□□□□ 0.67
MED28-204ENST00000506409 DEFB129Q9H1M3 183 aa19.21■□□□□ 0.67
MED28-204ENST00000506409 VEZTQ9HBM0 779 aa19.21■□□□□ 0.67
MED28-204ENST00000506409 COG6Q9Y2V7 657 aa19.21■□□□□ 0.67
MED28-204ENST00000506409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.21■□□□□ 0.67
MED28-204ENST00000506409 MAST3O60307 1309 aa19.21■□□□□ 0.67
MED28-204ENST00000506409 AOX1Q06278 1338 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms