RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 RBM5P52756 815 aaKnown RBP eCLIP17.45■□□□□ 0.38
SNHG4-203ENST00000506188 HUNKP57058 714 aa17.45■□□□□ 0.38
SNHG4-203ENST00000506188 APOBEC3FQ8IUX4 373 aaKnown RBP17.45■□□□□ 0.38
SNHG4-203ENST00000506188 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
SNHG4-203ENST00000506188 TBC1D22AQ8WUA7 517 aa17.45■□□□□ 0.38
SNHG4-203ENST00000506188 FAM84BQ96KN1 310 aaPredicted RBP17.45■□□□□ 0.38
SNHG4-203ENST00000506188 GNL3LQ9NVN8 582 aaKnown RBP17.45■□□□□ 0.38
SNHG4-203ENST00000506188 WNT10BO00744 389 aa17.44■□□□□ 0.38
SNHG4-203ENST00000506188 CIAO1O76071 339 aa17.44■□□□□ 0.38
SNHG4-203ENST00000506188 GNAI2P04899 355 aa17.44■□□□□ 0.38
SNHG4-203ENST00000506188 MS4A1P11836 297 aa17.44■□□□□ 0.38
SNHG4-203ENST00000506188 TRIM27P14373 513 aa17.44■□□□□ 0.38
SNHG4-203ENST00000506188 IL15P40933 162 aaPredicted RBP17.44■□□□□ 0.38
SNHG4-203ENST00000506188 FKBP1BP68106 108 aa17.44■□□□□ 0.38
SNHG4-203ENST00000506188 MFSD14BQ5SR56 506 aa17.44■□□□□ 0.38
SNHG4-203ENST00000506188 TDRD7Q8NHU6 1098 aaKnown RBP17.44■□□□□ 0.38
SNHG4-203ENST00000506188 LPIN2Q92539 896 aa17.44■□□□□ 0.38
SNHG4-203ENST00000506188 CCDC102AQ96A19 550 aa17.44■□□□□ 0.38
SNHG4-203ENST00000506188 CLUAP1Q96AJ1 413 aa17.44■□□□□ 0.38
SNHG4-203ENST00000506188 F8W031 263 aaPredicted RBP17.43■□□□□ 0.38
SNHG4-203ENST00000506188 PTPN12Q05209 780 aaKnown RBP17.43■□□□□ 0.38
SNHG4-203ENST00000506188 NBPF9Q3BBW0 867 aa17.43■□□□□ 0.38
SNHG4-203ENST00000506188 CYP4F22Q6NT55 531 aa17.43■□□□□ 0.38
SNHG4-203ENST00000506188 CDCA5Q96FF9 252 aa17.43■□□□□ 0.38
SNHG4-203ENST00000506188 MEIS3Q99687 375 aa17.43■□□□□ 0.38
SNHG4-203ENST00000506188 SIL1Q9H173 461 aa17.43■□□□□ 0.38
SNHG4-203ENST00000506188 FAM205AQ6ZU69 1335 aa17.43■□□□□ 0.38
SNHG4-203ENST00000506188 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
SNHG4-203ENST00000506188 TTLL12Q14166 644 aaPredicted RBP17.42■□□□□ 0.38
SNHG4-203ENST00000506188 FBXO33Q7Z6M2 555 aa17.42■□□□□ 0.38
SNHG4-203ENST00000506188 IRS2Q9Y4H2 1338 aa17.42■□□□□ 0.38
SNHG4-203ENST00000506188 CTCFP49711 727 aaPredicted RBP17.41■□□□□ 0.38
SNHG4-203ENST00000506188 CHAF1AQ13111 956 aaPredicted RBP17.41■□□□□ 0.38
SNHG4-203ENST00000506188 NOGQ13253 232 aa17.41■□□□□ 0.38
SNHG4-203ENST00000506188 RGMBQ6NW40 437 aa17.41■□□□□ 0.38
SNHG4-203ENST00000506188 MTMR14Q8NCE2 650 aa17.41■□□□□ 0.38
SNHG4-203ENST00000506188 COPRSQ9NQ92 184 aa17.41■□□□□ 0.38
SNHG4-203ENST00000506188 JAG2Q9Y219 1238 aa17.41■□□□□ 0.38
SNHG4-203ENST00000506188 AKAP2Q9Y2D5 859 aa17.41■□□□□ 0.38
SNHG4-203ENST00000506188 RFX5P48382 616 aaPredicted RBP17.4■□□□□ 0.38
SNHG4-203ENST00000506188 ZNF157P51786 506 aaPredicted RBP17.4■□□□□ 0.38
SNHG4-203ENST00000506188 ATP2B3Q16720 1220 aa17.4■□□□□ 0.38
SNHG4-203ENST00000506188 CFAP100Q494V2 611 aa17.4■□□□□ 0.38
SNHG4-203ENST00000506188 DZIP1LQ8IYY4 767 aaKnown RBP17.4■□□□□ 0.38
SNHG4-203ENST00000506188 VGLL2Q8N8G2 317 aa17.4■□□□□ 0.38
SNHG4-203ENST00000506188 TTF2Q9UNY4 1162 aaKnown RBP17.4■□□□□ 0.38
SNHG4-203ENST00000506188 ASTN2O75129 1339 aaPredicted RBP17.4■□□□□ 0.38
SNHG4-203ENST00000506188 CA12O43570 354 aa17.39■□□□□ 0.37
SNHG4-203ENST00000506188 TNFAIP1Q13829 316 aa17.39■□□□□ 0.37
SNHG4-203ENST00000506188 CERS5Q8N5B7 392 aa17.39■□□□□ 0.37
SNHG4-203ENST00000506188 WDR66Q8TBY9 1149 aa17.39■□□□□ 0.37
SNHG4-203ENST00000506188 WBP1LQ9NX94 342 aa17.39■□□□□ 0.37
SNHG4-203ENST00000506188 SERPINA10Q9UK55 444 aa17.39■□□□□ 0.37
SNHG4-203ENST00000506188 PPP2R3BQ9Y5P8 575 aa17.39■□□□□ 0.37
SNHG4-203ENST00000506188 MAST3O60307 1309 aa17.39■□□□□ 0.37
SNHG4-203ENST00000506188 BCAMP50895 628 aa17.38■□□□□ 0.37
SNHG4-203ENST00000506188 G3BP1Q13283 466 aaKnown RBP eCLIP17.38■□□□□ 0.37
SNHG4-203ENST00000506188 MTX1Q13505 466 aa17.38■□□□□ 0.37
SNHG4-203ENST00000506188 SUPT20HL1Q3ZLR7 823 aa17.38■□□□□ 0.37
SNHG4-203ENST00000506188 ARMC9Q7Z3E5 817 aa17.38■□□□□ 0.37
SNHG4-203ENST00000506188 ITPRIPQ8IWB1 547 aa17.38■□□□□ 0.37
SNHG4-203ENST00000506188 IQSEC3Q9UPP2 1182 aaPredicted RBP17.38■□□□□ 0.37
SNHG4-203ENST00000506188 SUGT1Q9Y2Z0 365 aa17.38■□□□□ 0.37
SNHG4-203ENST00000506188 SPDYE2BA6NHP3 402 aa17.37■□□□□ 0.37
SNHG4-203ENST00000506188 SPDYE6P0CI01 402 aa17.37■□□□□ 0.37
SNHG4-203ENST00000506188 FGFR2P21802 821 aa17.37■□□□□ 0.37
SNHG4-203ENST00000506188 TNNI2P48788 182 aa17.37■□□□□ 0.37
SNHG4-203ENST00000506188 HDLBPQ00341 1268 aaKnown RBP17.37■□□□□ 0.37
SNHG4-203ENST00000506188 ATG9AQ7Z3C6 839 aa17.37■□□□□ 0.37
SNHG4-203ENST00000506188 REM2Q8IYK8 340 aaPredicted RBP17.37■□□□□ 0.37
SNHG4-203ENST00000506188 TMEM57Q8N5G2 664 aa17.37■□□□□ 0.37
SNHG4-203ENST00000506188 CHMP4BQ9H444 224 aaKnown RBP17.37■□□□□ 0.37
SNHG4-203ENST00000506188 VEZTQ9HBM0 779 aa17.37■□□□□ 0.37
SNHG4-203ENST00000506188 PPP1R12BO60237 982 aaPredicted RBP17.36■□□□□ 0.37
SNHG4-203ENST00000506188 GORABQ5T7V8 394 aa17.36■□□□□ 0.37
SNHG4-203ENST00000506188 DLK2Q6UY11 383 aa17.36■□□□□ 0.37
SNHG4-203ENST00000506188 TEKT1Q969V4 418 aa17.36■□□□□ 0.37
SNHG4-203ENST00000506188 DEFB129Q9H1M3 183 aa17.36■□□□□ 0.37
SNHG4-203ENST00000506188 TMOD2Q9NZR1 351 aa17.36■□□□□ 0.37
SNHG4-203ENST00000506188 SPEF2Q9C093 1822 aa17.35■□□□□ 0.37
SNHG4-203ENST00000506188 SEMA3EO15041 775 aa17.35■□□□□ 0.37
SNHG4-203ENST00000506188 OS9Q13438 667 aaPredicted RBP17.35■□□□□ 0.37
SNHG4-203ENST00000506188 ZBED3Q96IU2 234 aaPredicted RBP17.35■□□□□ 0.37
SNHG4-203ENST00000506188 PRDM10Q9NQV6 1147 aa17.35■□□□□ 0.37
SNHG4-203ENST00000506188 DENND2AQ9ULE3 1009 aa17.35■□□□□ 0.37
SNHG4-203ENST00000506188 PA2G4Q9UQ80 394 aaKnown RBP17.35■□□□□ 0.37
SNHG4-203ENST00000506188 CLRN2A0PK11 232 aa17.34■□□□□ 0.37
SNHG4-203ENST00000506188 FOXN1O15353 648 aa17.34■□□□□ 0.37
SNHG4-203ENST00000506188 AOC2O75106 756 aa17.34■□□□□ 0.37
SNHG4-203ENST00000506188 MVPQ14764 893 aaKnown RBP17.34■□□□□ 0.37
SNHG4-203ENST00000506188 SCN9AQ15858 1988 aa17.34■□□□□ 0.37
SNHG4-203ENST00000506188 TNS4Q8IZW8 715 aa17.34■□□□□ 0.37
SNHG4-203ENST00000506188 ZGPATQ8N5A5 531 aaKnown RBP17.34■□□□□ 0.37
SNHG4-203ENST00000506188 PRMT6Q96LA8 375 aaPredicted RBP17.34■□□□□ 0.37
SNHG4-203ENST00000506188 MRIQ9BWK5 157 aa17.34■□□□□ 0.37
SNHG4-203ENST00000506188 CRKP46108 304 aa17.33■□□□□ 0.36
SNHG4-203ENST00000506188 PRAMEF18Q5VWM3 479 aa17.33■□□□□ 0.36
SNHG4-203ENST00000506188 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.36
SNHG4-203ENST00000506188 NEUROD6Q96NK8 337 aa17.33■□□□□ 0.36
SNHG4-203ENST00000506188 SCAF8Q9UPN6 1271 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms