RNA–Protein interactions for RNA: ENST00000505760.5

HERC4-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-212ENST00000505760 ZBED3Q96IU2 234 aaPredicted RBP31.17■■■□□ 2.58
HERC4-212ENST00000505760 SUCLG2Q96I99 432 aa31.16■■■□□ 2.58
HERC4-212ENST00000505760 F8W031 263 aaPredicted RBP31.15■■■□□ 2.58
HERC4-212ENST00000505760 NBPF7P0C2Y1 421 aaPredicted RBP31.15■■■□□ 2.58
HERC4-212ENST00000505760 MRPL50Q8N5N7 158 aaKnown RBP31.14■■■□□ 2.58
HERC4-212ENST00000505760 JAG2Q9Y219 1238 aa31.14■■■□□ 2.58
HERC4-212ENST00000505760 ECM29Q5VYK3 1845 aa31.13■■■□□ 2.57
HERC4-212ENST00000505760 E9PSI1 815 aa31.13■■■□□ 2.57
HERC4-212ENST00000505760 FKBP1AP62942 108 aaKnown RBP31.13■■■□□ 2.57
HERC4-212ENST00000505760 ARMC9Q7Z3E5 817 aa31.13■■■□□ 2.57
HERC4-212ENST00000505760 MTMR14Q8NCE2 650 aa31.13■■■□□ 2.57
HERC4-212ENST00000505760 KAZALD1Q96I82 304 aa31.13■■■□□ 2.57
HERC4-212ENST00000505760 PRKG1Q13976 671 aa31.12■■■□□ 2.57
HERC4-212ENST00000505760 UTYO14607 1347 aa31.12■■■□□ 2.57
HERC4-212ENST00000505760 MYO1BO43795 1136 aa31.11■■■□□ 2.57
HERC4-212ENST00000505760 COL1A1P02452 1464 aaPredicted RBP31.11■■■□□ 2.57
HERC4-212ENST00000505760 PTPRCP08575 1304 aa31.11■■■□□ 2.57
HERC4-212ENST00000505760 UBE4AQ14139 1066 aa31.11■■■□□ 2.57
HERC4-212ENST00000505760 CFAP100Q494V2 611 aa31.1■■■□□ 2.57
HERC4-212ENST00000505760 PUS3Q9BZE2 481 aaKnown RBP31.1■■■□□ 2.57
HERC4-212ENST00000505760 DEFB129Q9H1M3 183 aa31.1■■■□□ 2.57
HERC4-212ENST00000505760 BICC1Q9H694 974 aaKnown RBP31.1■■■□□ 2.57
HERC4-212ENST00000505760 PCDHAC2Q9Y5I4 1007 aa31.09■■■□□ 2.57
HERC4-212ENST00000505760 HIBADHP31937 336 aaKnown RBP31.08■■■□□ 2.57
HERC4-212ENST00000505760 GYG1P46976 350 aa31.08■■■□□ 2.57
HERC4-212ENST00000505760 RBM5P52756 815 aaKnown RBP eCLIP31.08■■■□□ 2.57
HERC4-212ENST00000505760 SSH1Q8WYL5 1049 aa31.08■■■□□ 2.57
HERC4-212ENST00000505760 MROH5Q6ZUA9 1318 aa31.07■■■□□ 2.56
HERC4-212ENST00000505760 SPDYE2BA6NHP3 402 aa31.07■■■□□ 2.56
HERC4-212ENST00000505760 SPDYE6P0CI01 402 aa31.07■■■□□ 2.56
HERC4-212ENST00000505760 PTPN12Q05209 780 aaKnown RBP31.07■■■□□ 2.56
HERC4-212ENST00000505760 MKRN3Q13064 507 aaKnown RBP31.07■■■□□ 2.56
HERC4-212ENST00000505760 ANGEL1Q9UNK9 670 aaKnown RBP31.07■■■□□ 2.56
HERC4-212ENST00000505760 FAM205AQ6ZU69 1335 aa31.06■■■□□ 2.56
HERC4-212ENST00000505760 CLRN2A0PK11 232 aa31.06■■■□□ 2.56
HERC4-212ENST00000505760 RABL6Q3YEC7 729 aaPredicted RBP31.06■■■□□ 2.56
HERC4-212ENST00000505760 TDRD7Q8NHU6 1098 aaKnown RBP31.06■■■□□ 2.56
HERC4-212ENST00000505760 PRMT6Q96LA8 375 aaPredicted RBP31.06■■■□□ 2.56
HERC4-212ENST00000505760 VEZTQ9HBM0 779 aa31.06■■■□□ 2.56
HERC4-212ENST00000505760 RIPOR2Q9Y4F9 1068 aa31.06■■■□□ 2.56
HERC4-212ENST00000505760 PPP2R3BQ9Y5P8 575 aa31.06■■■□□ 2.56
HERC4-212ENST00000505760 SLFN5Q08AF3 891 aa31.05■■■□□ 2.56
HERC4-212ENST00000505760 MFSD14BQ5SR56 506 aa31.05■■■□□ 2.56
HERC4-212ENST00000505760 FAM84BQ96KN1 310 aaPredicted RBP31.05■■■□□ 2.56
HERC4-212ENST00000505760 ANKRD44Q8N8A2 993 aa31.04■■■□□ 2.56
HERC4-212ENST00000505760 SREBF2Q12772 1141 aa31.03■■■□□ 2.56
HERC4-212ENST00000505760 METTL24Q5JXM2 366 aa31.03■■■□□ 2.56
HERC4-212ENST00000505760 LDLRAD1Q5T700 205 aa31.03■■■□□ 2.56
HERC4-212ENST00000505760 VPS37DQ86XT2 251 aa31.03■■■□□ 2.56
HERC4-212ENST00000505760 FZD1Q9UP38 647 aa31.03■■■□□ 2.56
HERC4-212ENST00000505760 PPP1R12BO60237 982 aaPredicted RBP31.02■■■□□ 2.56
HERC4-212ENST00000505760 TM4SF4P48230 202 aa31.02■■■□□ 2.56
HERC4-212ENST00000505760 SUPT20HL1Q3ZLR7 823 aa31.01■■■□□ 2.55
HERC4-212ENST00000505760 LRRC24Q50LG9 513 aa31.01■■■□□ 2.55
HERC4-212ENST00000505760 TTF2Q9UNY4 1162 aaKnown RBP31.01■■■□□ 2.55
HERC4-212ENST00000505760 ARAP2Q8WZ64 1704 aa31.01■■■□□ 2.55
HERC4-212ENST00000505760 TBC1D8O95759 1140 aa31■■■□□ 2.55
HERC4-212ENST00000505760 MLLT1Q03111 559 aaPredicted RBP31■■■□□ 2.55
HERC4-212ENST00000505760 CTU1Q7Z7A3 348 aaKnown RBP31■■■□□ 2.55
HERC4-212ENST00000505760 SLC10A4Q96EP9 437 aa31■■■□□ 2.55
HERC4-212ENST00000505760 USP44Q9H0E7 712 aa31■■■□□ 2.55
HERC4-212ENST00000505760 ZBTB4Q9P1Z0 1013 aaPredicted RBP31■■■□□ 2.55
HERC4-212ENST00000505760 RGS19P49795 217 aa30.99■■■□□ 2.55
HERC4-212ENST00000505760 ALDH1L2Q3SY69 923 aa30.99■■■□□ 2.55
HERC4-212ENST00000505760 SPRYD7Q5W111 196 aa30.99■■■□□ 2.55
HERC4-212ENST00000505760 CDCA7LQ96GN5 454 aa30.99■■■□□ 2.55
HERC4-212ENST00000505760 SERPINA10Q9UK55 444 aa30.99■■■□□ 2.55
HERC4-212ENST00000505760 AOX1Q06278 1338 aa30.98■■■□□ 2.55
HERC4-212ENST00000505760 SSC5DA1L4H1 1573 aa30.98■■■□□ 2.55
HERC4-212ENST00000505760 FRAT2O75474 233 aaPredicted RBP30.98■■■□□ 2.55
HERC4-212ENST00000505760 MAP3K11Q16584 847 aa30.98■■■□□ 2.55
HERC4-212ENST00000505760 CAVIN4Q5BKX8 364 aa30.98■■■□□ 2.55
HERC4-212ENST00000505760 SMC4Q9NTJ3 1288 aa30.98■■■□□ 2.55
HERC4-212ENST00000505760 IQSEC3Q9UPP2 1182 aaPredicted RBP30.98■■■□□ 2.55
HERC4-212ENST00000505760 PDE8BO95263 885 aa30.97■■■□□ 2.55
HERC4-212ENST00000505760 RASA3Q14644 834 aa30.97■■■□□ 2.55
HERC4-212ENST00000505760 FBXO33Q7Z6M2 555 aa30.97■■■□□ 2.55
HERC4-212ENST00000505760 KLHDC4Q8TBB5 520 aa30.97■■■□□ 2.55
HERC4-212ENST00000505760 TNFAIP1Q13829 316 aa30.96■■■□□ 2.55
HERC4-212ENST00000505760 NBPF12Q5TAG4 269 aaPredicted RBP30.96■■■□□ 2.55
HERC4-212ENST00000505760 CHAF1AQ13111 956 aaPredicted RBP30.95■■■□□ 2.55
HERC4-212ENST00000505760 SPDYE2Q495Y8 402 aa30.95■■■□□ 2.55
HERC4-212ENST00000505760 ZNF296Q8WUU4 475 aaPredicted RBP30.95■■■□□ 2.55
HERC4-212ENST00000505760 IREB2P48200 963 aaKnown RBP30.94■■■□□ 2.54
HERC4-212ENST00000505760 DZIP1LQ8IYY4 767 aaKnown RBP30.94■■■□□ 2.54
HERC4-212ENST00000505760 VGLL2Q8N8G2 317 aa30.94■■■□□ 2.54
HERC4-212ENST00000505760 CLMNQ96JQ2 1002 aa30.94■■■□□ 2.54
HERC4-212ENST00000505760 TDRD3Q9H7E2 651 aaKnown RBP30.94■■■□□ 2.54
HERC4-212ENST00000505760 ZNF70Q9UC06 446 aaPredicted RBP30.94■■■□□ 2.54
HERC4-212ENST00000505760 UNCXA6NJT0 531 aa30.93■■■□□ 2.54
HERC4-212ENST00000505760 TBC1D22AQ8WUA7 517 aa30.93■■■□□ 2.54
HERC4-212ENST00000505760 MANSC4A6NHS7 340 aaPredicted RBP30.92■■■□□ 2.54
HERC4-212ENST00000505760 ZBTB48P10074 688 aaPredicted RBP30.92■■■□□ 2.54
HERC4-212ENST00000505760 CRKP46108 304 aa30.92■■■□□ 2.54
HERC4-212ENST00000505760 GPR25O00155 361 aa30.91■■■□□ 2.54
HERC4-212ENST00000505760 INHBEP58166 350 aa30.91■■■□□ 2.54
HERC4-212ENST00000505760 PUM3Q15397 648 aaKnown RBP30.91■■■□□ 2.54
HERC4-212ENST00000505760 WNK4Q96J92 1243 aa30.91■■■□□ 2.54
HERC4-212ENST00000505760 ALDH1A1P00352 501 aa30.9■■■□□ 2.54
HERC4-212ENST00000505760 IFIT1P09914 478 aaKnown RBP30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms