RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 LMNB2Q03252 620 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 FOXD4Q12950 439 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 DHX8Q14562 1220 aaKnown RBP4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 GRIN2CQ14957 1233 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 NFE2Q16621 373 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 CWF19L2Q2TBE0 894 aaKnown RBP4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 NBPF1Q3BBV0 1214 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 GNASQ5JWF2 1037 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 TTBK2Q6IQ55 1244 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 CNNM4Q6P4Q7 775 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 ADGRD1Q6QNK2 874 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 XKR5Q6UX68 686 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 MAMSTRQ6ZN01 415 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 C3orf58Q8NDZ4 430 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 OR6P1Q8NGX9 317 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 PMEPA1Q969W9 287 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 IL17RAQ96F46 866 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 HSH2DQ96JZ2 352 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 SUSD3Q96L08 255 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 RHOVQ96L33 236 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 ARPC5LQ9BPX5 153 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 PLCD4Q9BRC7 762 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 CEP44Q9C0F1 390 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 TNKS2Q9H2K2 1166 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 ARNT2Q9HBZ2 717 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 LATS2Q9NRM7 1088 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 AASDHPPTQ9NRN7 309 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 GNL3LQ9NVN8 582 aaKnown RBP4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 PPM1HQ9ULR3 514 aa4.69□□□□□ -1.66
HMGB1P22-201ENST00000505315 TMEM238LA0A1B0GVL6 79 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 A0A1W2PP55 124 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 SHTN1A0MZ66 631 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 B2RBV5 119 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 MAFGO15525 162 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 PDE8AO60658 829 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 XYLBO75191 536 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 KATNA1O75449 491 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 EDN3P14138 238 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 TATP17735 454 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 PTMSP20962 102 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 STAT3P40763 770 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 CLN3Q13286 438 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 TRIP4Q15650 581 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 SLC27A3Q5K4L6 730 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 PERM1Q5SV97 790 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 C6orf15Q6UXA7 325 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 FAM196AQ6ZSG2 479 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 SLITRK4Q8IW52 837 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 SAMD3Q8N6K7 520 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 ZNF280CQ8ND82 737 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 FBXO27Q8NI29 283 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 NINJ1Q92982 152 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 MTMR8Q96EF0 704 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 IPO9Q96P70 1041 aaKnown RBP4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 MTRQ99707 1265 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 MIR1-1HGQ9H1L0 117 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 ABI2Q9NYB9 513 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 ZIM2Q9NZV7 527 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 ANKIB1Q9P2G1 1089 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 NOB1Q9ULX3 412 aaKnown RBP4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 TLL2Q9Y6L7 1015 aa4.68□□□□□ -1.66
HMGB1P22-201ENST00000505315 KIF4AO95239 1232 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 F13A1P00488 732 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 EPB42P16452 691 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 GARTP22102 1010 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 PMLP29590 882 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 RAB27AP51159 221 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 ITKQ08881 620 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 TRIM32Q13049 653 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 TM4SF20Q53R12 229 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 KIAA0319Q5VV43 1072 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 POTEAQ6S8J7 498 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 BNC2Q6ZN30 1099 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 FAM178BQ8IXR5 827 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 FAM9BQ8IZU0 186 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 RHBDD1Q8TEB9 315 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 MAF1Q9H063 256 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 LIN7BQ9HAP6 207 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 KANSL3Q9P2N6 904 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 ZMYM5Q9UJ78 669 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 WASHC2CQ9Y4E1 1318 aa4.67□□□□□ -1.66
HMGB1P22-201ENST00000505315 ROBO2Q9HCK4 1378 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 GOLGA6CA6NDK9 693 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 GOLGA6BA6NDN3 693 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 PHF20L1A8MW92 1017 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 NRDCO43847 1150 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 ADH1AP07327 375 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 IFIT2P09913 472 aaKnown RBP4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 FAM153BP0C7A2 387 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 GOLGA6DP0CG33 693 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 POTEJP0CG39 1038 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 IMPDH2P12268 514 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 TFE3P19532 575 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 GRM5P41594 1212 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 MAP3K10Q02779 954 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 CBX2Q14781 532 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 CTC1Q2NKJ3 1217 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 ARSJQ5FYB0 599 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 TMEM67Q5HYA8 995 aa4.66□□□□□ -1.66
HMGB1P22-201ENST00000505315 C10orf62Q5T681 223 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms