RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 CNNM1Q9NRU3 951 aa21.02■□□□□ 0.96
SYNE4-207ENST00000505054 A0A1B0GUL6 1792 aa21.02■□□□□ 0.96
SYNE4-207ENST00000505054 ZNF646O15015 1829 aaPredicted RBP21.01■□□□□ 0.95
SYNE4-207ENST00000505054 G3V3G9 751 aa21.01■□□□□ 0.95
SYNE4-207ENST00000505054 ATP2B4P23634 1241 aa21.01■□□□□ 0.95
SYNE4-207ENST00000505054 ZNF157P51786 506 aaPredicted RBP21.01■□□□□ 0.95
SYNE4-207ENST00000505054 LRRC24Q50LG9 513 aa21.01■□□□□ 0.95
SYNE4-207ENST00000505054 DCAF8Q5TAQ9 597 aa21.01■□□□□ 0.95
SYNE4-207ENST00000505054 HELBQ8NG08 1087 aaPredicted RBP21.01■□□□□ 0.95
SYNE4-207ENST00000505054 DDX19BQ9UMR2 479 aa21.01■□□□□ 0.95
SYNE4-207ENST00000505054 RIPOR2Q9Y4F9 1068 aa21.01■□□□□ 0.95
SYNE4-207ENST00000505054 SRGAP3O43295 1099 aa21■□□□□ 0.95
SYNE4-207ENST00000505054 SLC10A3P09131 477 aa21■□□□□ 0.95
SYNE4-207ENST00000505054 AGBL3Q8NEM8 1001 aa21■□□□□ 0.95
SYNE4-207ENST00000505054 PNMA6EA0A0J9YXQ4 647 aa20.99■□□□□ 0.95
SYNE4-207ENST00000505054 TAF5LO75529 589 aa20.99■□□□□ 0.95
SYNE4-207ENST00000505054 ZNF280AP59817 542 aaPredicted RBP20.99■□□□□ 0.95
SYNE4-207ENST00000505054 KIF23Q02241 960 aaPredicted RBP20.99■□□□□ 0.95
SYNE4-207ENST00000505054 RSBN1LQ6PCB5 846 aaPredicted RBP20.99■□□□□ 0.95
SYNE4-207ENST00000505054 CDCA5Q96FF9 252 aa20.99■□□□□ 0.95
SYNE4-207ENST00000505054 PA2G4Q9UQ80 394 aaKnown RBP20.99■□□□□ 0.95
SYNE4-207ENST00000505054 SNAP23O00161 211 aa20.98■□□□□ 0.95
SYNE4-207ENST00000505054 EYA2O00167 538 aa20.98■□□□□ 0.95
SYNE4-207ENST00000505054 ZBTB40Q9NUA8 1239 aa20.98■□□□□ 0.95
SYNE4-207ENST00000505054 LEMD3Q9Y2U8 911 aa20.98■□□□□ 0.95
SYNE4-207ENST00000505054 ZNF804BA4D1E1 1349 aa20.98■□□□□ 0.95
SYNE4-207ENST00000505054 ASTN2O75129 1339 aaPredicted RBP20.98■□□□□ 0.95
SYNE4-207ENST00000505054 MED23Q9ULK4 1368 aa20.97■□□□□ 0.95
SYNE4-207ENST00000505054 KLRK1P26718 216 aa20.97■□□□□ 0.95
SYNE4-207ENST00000505054 ATG9AQ7Z3C6 839 aa20.97■□□□□ 0.95
SYNE4-207ENST00000505054 SIL1Q9H173 461 aa20.97■□□□□ 0.95
SYNE4-207ENST00000505054 COPRSQ9NQ92 184 aa20.97■□□□□ 0.95
SYNE4-207ENST00000505054 MROH5Q6ZUA9 1318 aa20.97■□□□□ 0.95
SYNE4-207ENST00000505054 ANGEL2Q5VTE6 544 aaKnown RBP20.96■□□□□ 0.95
SYNE4-207ENST00000505054 TXNRD3Q86VQ6 643 aa20.96■□□□□ 0.95
SYNE4-207ENST00000505054 VGLL2Q8N8G2 317 aa20.96■□□□□ 0.95
SYNE4-207ENST00000505054 RNF186Q9NXI6 227 aa20.96■□□□□ 0.95
SYNE4-207ENST00000505054 PITPNM2Q9BZ72 1349 aa20.96■□□□□ 0.95
SYNE4-207ENST00000505054 IRS2Q9Y4H2 1338 aa20.96■□□□□ 0.95
SYNE4-207ENST00000505054 CIAO1O76071 339 aa20.95■□□□□ 0.94
SYNE4-207ENST00000505054 KCNJ4P48050 445 aa20.95■□□□□ 0.94
SYNE4-207ENST00000505054 FKBP1BP68106 108 aa20.95■□□□□ 0.94
SYNE4-207ENST00000505054 ATP8B2P98198 1209 aa20.95■□□□□ 0.94
SYNE4-207ENST00000505054 SCARF1Q14162 830 aa20.95■□□□□ 0.94
SYNE4-207ENST00000505054 POLA2Q14181 598 aa20.95■□□□□ 0.94
SYNE4-207ENST00000505054 METTL24Q5JXM2 366 aa20.95■□□□□ 0.94
SYNE4-207ENST00000505054 CEP85Q6P2H3 762 aa20.95■□□□□ 0.94
SYNE4-207ENST00000505054 FBXO3Q9UK99 471 aa20.95■□□□□ 0.94
SYNE4-207ENST00000505054 TRPA1O75762 1119 aa20.94■□□□□ 0.94
SYNE4-207ENST00000505054 RASAL3Q86YV0 1011 aa20.94■□□□□ 0.94
SYNE4-207ENST00000505054 REM2Q8IYK8 340 aaPredicted RBP20.94■□□□□ 0.94
SYNE4-207ENST00000505054 SSH3Q8TE77 659 aa20.94■□□□□ 0.94
SYNE4-207ENST00000505054 GMLQ99445 158 aa20.94■□□□□ 0.94
SYNE4-207ENST00000505054 MYOZ2Q9NPC6 264 aa20.94■□□□□ 0.94
SYNE4-207ENST00000505054 TNRC18O15417 2968 aaPredicted RBP20.94■□□□□ 0.94
SYNE4-207ENST00000505054 USP17L8P0C7I0 530 aa20.93■□□□□ 0.94
SYNE4-207ENST00000505054 PODNQ7Z5L7 613 aa20.93■□□□□ 0.94
SYNE4-207ENST00000505054 USP17L3A6NCW0 530 aa20.92■□□□□ 0.94
SYNE4-207ENST00000505054 USP17L4A6NCW7 530 aa20.92■□□□□ 0.94
SYNE4-207ENST00000505054 PDE8BO95263 885 aa20.92■□□□□ 0.94
SYNE4-207ENST00000505054 C15orf52Q6ZUT6 534 aaKnown RBP20.92■□□□□ 0.94
SYNE4-207ENST00000505054 USP17L1Q7RTZ2 530 aa20.92■□□□□ 0.94
SYNE4-207ENST00000505054 CSRNP1Q96S65 589 aa20.92■□□□□ 0.94
SYNE4-207ENST00000505054 CHMP4BQ9H444 224 aaKnown RBP20.92■□□□□ 0.94
SYNE4-207ENST00000505054 IL15P40933 162 aaPredicted RBP20.91■□□□□ 0.94
SYNE4-207ENST00000505054 UBE4AQ14139 1066 aa20.91■□□□□ 0.94
SYNE4-207ENST00000505054 PDE4DIPQ5VU43 2346 aa20.9■□□□□ 0.94
SYNE4-207ENST00000505054 SUPT16HQ9Y5B9 1047 aaKnown RBP20.9■□□□□ 0.94
SYNE4-207ENST00000505054 FGFR2P21802 821 aa20.89■□□□□ 0.93
SYNE4-207ENST00000505054 CTU1Q7Z7A3 348 aaKnown RBP20.89■□□□□ 0.93
SYNE4-207ENST00000505054 SIRT2Q8IXJ6 389 aa20.89■□□□□ 0.93
SYNE4-207ENST00000505054 CRBNQ96SW2 442 aa20.89■□□□□ 0.93
SYNE4-207ENST00000505054 MYO3BQ8WXR4 1341 aa20.88■□□□□ 0.93
SYNE4-207ENST00000505054 PUM3Q15397 648 aaKnown RBP20.88■□□□□ 0.93
SYNE4-207ENST00000505054 COA1Q9GZY4 146 aa20.88■□□□□ 0.93
SYNE4-207ENST00000505054 RPAP2Q8IXW5 612 aaPredicted RBP20.87■□□□□ 0.93
SYNE4-207ENST00000505054 CEP126Q9P2H0 1117 aa20.87■□□□□ 0.93
SYNE4-207ENST00000505054 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.87■□□□□ 0.93
SYNE4-207ENST00000505054 ECM29Q5VYK3 1845 aa20.87■□□□□ 0.93
SYNE4-207ENST00000505054 TFCP2Q12800 502 aa20.86■□□□□ 0.93
SYNE4-207ENST00000505054 DACT2Q5SW24 774 aa20.86■□□□□ 0.93
SYNE4-207ENST00000505054 CD209Q9NNX6 404 aa20.86■□□□□ 0.93
SYNE4-207ENST00000505054 NOP58Q9Y2X3 529 aaKnown RBP20.86■□□□□ 0.93
SYNE4-207ENST00000505054 SURF6O75683 361 aaKnown RBP20.85■□□□□ 0.93
SYNE4-207ENST00000505054 GYG1P46976 350 aa20.85■□□□□ 0.93
SYNE4-207ENST00000505054 SOX10P56693 466 aa20.85■□□□□ 0.93
SYNE4-207ENST00000505054 G3BP1Q13283 466 aaKnown RBP eCLIP20.85■□□□□ 0.93
SYNE4-207ENST00000505054 ATP2B3Q16720 1220 aa20.85■□□□□ 0.93
SYNE4-207ENST00000505054 NBPF9Q3BBW0 867 aa20.85■□□□□ 0.93
SYNE4-207ENST00000505054 ZNF804AQ7Z570 1209 aa20.85■□□□□ 0.93
SYNE4-207ENST00000505054 OGFOD1Q8N543 542 aa20.85■□□□□ 0.93
SYNE4-207ENST00000505054 LPIN2Q92539 896 aa20.85■□□□□ 0.93
SYNE4-207ENST00000505054 FAM84BQ96KN1 310 aaPredicted RBP20.85■□□□□ 0.93
SYNE4-207ENST00000505054 SASH1O94885 1247 aa20.84■□□□□ 0.93
SYNE4-207ENST00000505054 MMP14P50281 582 aa20.84■□□□□ 0.93
SYNE4-207ENST00000505054 STRIP1Q5VSL9 837 aa20.84■□□□□ 0.93
SYNE4-207ENST00000505054 MOB2Q70IA6 237 aa20.84■□□□□ 0.93
SYNE4-207ENST00000505054 LAMB1P07942 1786 aa20.84■□□□□ 0.93
SYNE4-207ENST00000505054 WNT10BO00744 389 aa20.83■□□□□ 0.93
SYNE4-207ENST00000505054 IFIT1P09914 478 aaKnown RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms