RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 FAM205AQ6ZU69 1335 aa22.31■■□□□ 1.16
DDR1-254ENST00000504679 IQCA1LA6NCM1 817 aa22.31■■□□□ 1.16
DDR1-254ENST00000504679 ZBTB22O15209 634 aa22.31■■□□□ 1.16
DDR1-254ENST00000504679 SMARCA5O60264 1052 aaPredicted RBP22.31■■□□□ 1.16
DDR1-254ENST00000504679 UQCRFS1P1P0C7P4 283 aa22.31■■□□□ 1.16
DDR1-254ENST00000504679 GMPSP49915 693 aaPredicted RBP22.31■■□□□ 1.16
DDR1-254ENST00000504679 TTC39AQ5SRH9 613 aa22.31■■□□□ 1.16
DDR1-254ENST00000504679 ZNF784Q8NCA9 323 aaPredicted RBP22.31■■□□□ 1.16
DDR1-254ENST00000504679 MYO3BQ8WXR4 1341 aa22.31■■□□□ 1.16
DDR1-254ENST00000504679 FKBP1AP62942 108 aaKnown RBP22.3■■□□□ 1.16
DDR1-254ENST00000504679 CHAF1AQ13111 956 aaPredicted RBP22.3■■□□□ 1.16
DDR1-254ENST00000504679 ANKRD45Q5TZF3 282 aa22.3■■□□□ 1.16
DDR1-254ENST00000504679 DBNLQ9UJU6 430 aaKnown RBP22.3■■□□□ 1.16
DDR1-254ENST00000504679 H7C1D1 291 aa22.29■■□□□ 1.16
DDR1-254ENST00000504679 WDR66Q8TBY9 1149 aa22.29■■□□□ 1.16
DDR1-254ENST00000504679 TBC1D22AQ8WUA7 517 aa22.29■■□□□ 1.16
DDR1-254ENST00000504679 GPRC5DQ9NZD1 345 aa22.29■■□□□ 1.16
DDR1-254ENST00000504679 CNOT7Q9UIV1 285 aaKnown RBP22.29■■□□□ 1.16
DDR1-254ENST00000504679 HACL1Q9UJ83 578 aa22.29■■□□□ 1.16
DDR1-254ENST00000504679 JAG2Q9Y219 1238 aa22.29■■□□□ 1.16
DDR1-254ENST00000504679 ARAP2Q8WZ64 1704 aa22.28■■□□□ 1.16
DDR1-254ENST00000504679 SCNN1DP51172 638 aa22.28■■□□□ 1.16
DDR1-254ENST00000504679 SMC5Q8IY18 1101 aa22.28■■□□□ 1.16
DDR1-254ENST00000504679 ZNF512BQ96KM6 892 aaPredicted RBP22.28■■□□□ 1.16
DDR1-254ENST00000504679 GMLQ99445 158 aa22.28■■□□□ 1.16
DDR1-254ENST00000504679 MXD3Q9BW11 206 aa22.28■■□□□ 1.16
DDR1-254ENST00000504679 NMRK2Q9NPI5 230 aa22.28■■□□□ 1.16
DDR1-254ENST00000504679 PSME4Q14997 1843 aa22.28■■□□□ 1.16
DDR1-254ENST00000504679 POTECB2RU33 542 aa22.27■■□□□ 1.16
DDR1-254ENST00000504679 ARID4AP29374 1257 aaPredicted RBP22.27■■□□□ 1.16
DDR1-254ENST00000504679 MMP14P50281 582 aa22.27■■□□□ 1.16
DDR1-254ENST00000504679 MFSD14BQ5SR56 506 aa22.27■■□□□ 1.16
DDR1-254ENST00000504679 OGFOD1Q8N543 542 aa22.27■■□□□ 1.16
DDR1-254ENST00000504679 TLR7Q9NYK1 1049 aaKnown RBP22.27■■□□□ 1.16
DDR1-254ENST00000504679 WDR90Q96KV7 1748 aa22.26■■□□□ 1.15
DDR1-254ENST00000504679 USP17L8P0C7I0 530 aa22.26■■□□□ 1.15
DDR1-254ENST00000504679 EPS15P42566 896 aa22.26■■□□□ 1.15
DDR1-254ENST00000504679 B4GALNT3Q6L9W6 998 aa22.26■■□□□ 1.15
DDR1-254ENST00000504679 RASGRF1Q13972 1273 aa22.25■■□□□ 1.15
DDR1-254ENST00000504679 ERICH6BQ5W0A0 696 aa22.25■■□□□ 1.15
DDR1-254ENST00000504679 MICALL2Q8IY33 904 aa22.25■■□□□ 1.15
DDR1-254ENST00000504679 SPATA5Q8NB90 893 aa22.25■■□□□ 1.15
DDR1-254ENST00000504679 HMG20BQ9P0W2 317 aa22.25■■□□□ 1.15
DDR1-254ENST00000504679 HDAC9Q9UKV0 1011 aa22.25■■□□□ 1.15
DDR1-254ENST00000504679 SCN4AP35499 1836 aa22.24■■□□□ 1.15
DDR1-254ENST00000504679 EPHX2P34913 555 aa22.24■■□□□ 1.15
DDR1-254ENST00000504679 KIAA0825Q8IV33 1275 aa22.24■■□□□ 1.15
DDR1-254ENST00000504679 C16orf71Q8IYS4 520 aaPredicted RBP22.24■■□□□ 1.15
DDR1-254ENST00000504679 ZGPATQ8N5A5 531 aaKnown RBP22.24■■□□□ 1.15
DDR1-254ENST00000504679 CERS5Q8N5B7 392 aa22.24■■□□□ 1.15
DDR1-254ENST00000504679 TAF1DQ9H5J8 278 aaPredicted RBP22.24■■□□□ 1.15
DDR1-254ENST00000504679 ADARB2Q9NS39 739 aaKnown RBP22.24■■□□□ 1.15
DDR1-254ENST00000504679 SUGT1Q9Y2Z0 365 aa22.24■■□□□ 1.15
DDR1-254ENST00000504679 PDS5AQ29RF7 1337 aaKnown RBP22.24■■□□□ 1.15
DDR1-254ENST00000504679 PNMA8AQ86V59 439 aaPredicted RBP22.23■■□□□ 1.15
DDR1-254ENST00000504679 GPATCH3Q96I76 525 aa22.23■■□□□ 1.15
DDR1-254ENST00000504679 MYH13Q9UKX3 1938 aa22.23■■□□□ 1.15
DDR1-254ENST00000504679 F8W031 263 aaPredicted RBP22.22■■□□□ 1.15
DDR1-254ENST00000504679 MCAMP43121 646 aa22.22■■□□□ 1.15
DDR1-254ENST00000504679 SPTY2D1Q68D10 685 aaPredicted RBP22.22■■□□□ 1.15
DDR1-254ENST00000504679 USP50Q70EL3 339 aaPredicted RBP22.22■■□□□ 1.15
DDR1-254ENST00000504679 ZNF280AP59817 542 aaPredicted RBP22.21■■□□□ 1.15
DDR1-254ENST00000504679 NUCB1Q02818 461 aa22.21■■□□□ 1.15
DDR1-254ENST00000504679 SCARF1Q14162 830 aa22.21■■□□□ 1.15
DDR1-254ENST00000504679 CHD1LQ86WJ1 897 aa22.21■■□□□ 1.15
DDR1-254ENST00000504679 SNRKQ9NRH2 765 aa22.21■■□□□ 1.15
DDR1-254ENST00000504679 ECHDC1Q9NTX5 307 aa22.21■■□□□ 1.15
DDR1-254ENST00000504679 TTF2Q9UNY4 1162 aaKnown RBP22.21■■□□□ 1.15
DDR1-254ENST00000504679 SALL1Q9NSC2 1324 aa22.21■■□□□ 1.15
DDR1-254ENST00000504679 LDHBP07195 334 aaKnown RBP22.2■■□□□ 1.14
DDR1-254ENST00000504679 ATP5JP18859 108 aa22.2■■□□□ 1.14
DDR1-254ENST00000504679 RBM26Q5T8P6 1007 aaKnown RBP22.2■■□□□ 1.14
DDR1-254ENST00000504679 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.2■■□□□ 1.14
DDR1-254ENST00000504679 CCDC136Q96JN2 1154 aa22.2■■□□□ 1.14
DDR1-254ENST00000504679 ABCF2Q9UG63 623 aa22.2■■□□□ 1.14
DDR1-254ENST00000504679 SHTN1A0MZ66 631 aa22.19■■□□□ 1.14
DDR1-254ENST00000504679 KIF3CO14782 793 aa22.19■■□□□ 1.14
DDR1-254ENST00000504679 EAPPQ56P03 285 aaPredicted RBP22.19■■□□□ 1.14
DDR1-254ENST00000504679 PI16Q6UXB8 463 aa22.19■■□□□ 1.14
DDR1-254ENST00000504679 SAMD7Q7Z3H4 446 aa22.19■■□□□ 1.14
DDR1-254ENST00000504679 LNPKQ9C0E8 428 aa22.19■■□□□ 1.14
DDR1-254ENST00000504679 MYOZ2Q9NPC6 264 aa22.19■■□□□ 1.14
DDR1-254ENST00000504679 ZNF646O15015 1829 aaPredicted RBP22.18■■□□□ 1.14
DDR1-254ENST00000504679 MAST3O60307 1309 aa22.18■■□□□ 1.14
DDR1-254ENST00000504679 ZAP70P43403 619 aa22.18■■□□□ 1.14
DDR1-254ENST00000504679 TBC1D10BQ4KMP7 808 aaPredicted RBP22.18■■□□□ 1.14
DDR1-254ENST00000504679 ERICH6Q7L0X2 663 aa22.18■■□□□ 1.14
DDR1-254ENST00000504679 MRIQ9BWK5 157 aa22.18■■□□□ 1.14
DDR1-254ENST00000504679 CLEC11AQ9Y240 323 aa22.18■■□□□ 1.14
DDR1-254ENST00000504679 COL1A1P02452 1464 aaPredicted RBP22.17■■□□□ 1.14
DDR1-254ENST00000504679 TTC41PQ6P2S7 1318 aa22.17■■□□□ 1.14
DDR1-254ENST00000504679 HDLBPQ00341 1268 aaKnown RBP22.17■■□□□ 1.14
DDR1-254ENST00000504679 TBC1D9Q6ZT07 1266 aa22.17■■□□□ 1.14
DDR1-254ENST00000504679 BOLA2Q9H3K6 86 aa22.17■■□□□ 1.14
DDR1-254ENST00000504679 LRP2BPQ9P2M1 347 aa22.17■■□□□ 1.14
DDR1-254ENST00000504679 ERC2O15083 957 aa22.16■■□□□ 1.14
DDR1-254ENST00000504679 CYP2E1P05181 493 aaPredicted RBP22.16■■□□□ 1.14
DDR1-254ENST00000504679 RBM5P52756 815 aaKnown RBP eCLIP22.16■■□□□ 1.14
DDR1-254ENST00000504679 DLGAP5Q15398 846 aa22.16■■□□□ 1.14
DDR1-254ENST00000504679 GRIK5Q16478 980 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms