RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 PRDM10Q9NQV6 1147 aa17.61■□□□□ 0.41
PDLIM7-211ENST00000504318 MROH5Q6ZUA9 1318 aa17.61■□□□□ 0.41
PDLIM7-211ENST00000504318 SASH1O94885 1247 aa17.6■□□□□ 0.41
PDLIM7-211ENST00000504318 FGFR2P21802 821 aa17.6■□□□□ 0.41
PDLIM7-211ENST00000504318 GYG1P46976 350 aa17.6■□□□□ 0.41
PDLIM7-211ENST00000504318 CTCFP49711 727 aaPredicted RBP17.6■□□□□ 0.41
PDLIM7-211ENST00000504318 FBXO33Q7Z6M2 555 aa17.6■□□□□ 0.41
PDLIM7-211ENST00000504318 ARHGAP45Q92619 1136 aa17.6■□□□□ 0.41
PDLIM7-211ENST00000504318 ATG9AQ7Z3C6 839 aa17.59■□□□□ 0.41
PDLIM7-211ENST00000504318 OGFOD1Q8N543 542 aa17.59■□□□□ 0.41
PDLIM7-211ENST00000504318 TNNQ9UQP3 1299 aa17.59■□□□□ 0.41
PDLIM7-211ENST00000504318 SSC5DA1L4H1 1573 aa17.58■□□□□ 0.41
PDLIM7-211ENST00000504318 PDE8BO95263 885 aa17.58■□□□□ 0.4
PDLIM7-211ENST00000504318 LBX1P52954 281 aa17.58■□□□□ 0.4
PDLIM7-211ENST00000504318 PRAMEF18Q5VWM3 479 aa17.58■□□□□ 0.4
PDLIM7-211ENST00000504318 INTS3Q68E01 1043 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-211ENST00000504318 RGMBQ6NW40 437 aa17.58■□□□□ 0.4
PDLIM7-211ENST00000504318 PAXIP1Q6ZW49 1069 aaPredicted RBP17.58■□□□□ 0.4
PDLIM7-211ENST00000504318 API5Q9BZZ5 524 aaKnown RBP17.58■□□□□ 0.4
PDLIM7-211ENST00000504318 JAG2Q9Y219 1238 aa17.58■□□□□ 0.4
PDLIM7-211ENST00000504318 KIF16BQ96L93 1317 aa17.57■□□□□ 0.4
PDLIM7-211ENST00000504318 SLC10A3P09131 477 aa17.57■□□□□ 0.4
PDLIM7-211ENST00000504318 HIBADHP31937 336 aaKnown RBP17.57■□□□□ 0.4
PDLIM7-211ENST00000504318 GRM1Q13255 1194 aa17.57■□□□□ 0.4
PDLIM7-211ENST00000504318 GRIK5Q16478 980 aa17.57■□□□□ 0.4
PDLIM7-211ENST00000504318 C2orf69Q8N8R5 385 aa17.57■□□□□ 0.4
PDLIM7-211ENST00000504318 MEIS3Q99687 375 aa17.57■□□□□ 0.4
PDLIM7-211ENST00000504318 COL1A1P02452 1464 aaPredicted RBP17.56■□□□□ 0.4
PDLIM7-211ENST00000504318 LAMB1P07942 1786 aa17.56■□□□□ 0.4
PDLIM7-211ENST00000504318 SPDYE2BA6NHP3 402 aa17.56■□□□□ 0.4
PDLIM7-211ENST00000504318 EYA2O00167 538 aa17.56■□□□□ 0.4
PDLIM7-211ENST00000504318 BCAR3O75815 825 aa17.56■□□□□ 0.4
PDLIM7-211ENST00000504318 SPDYE6P0CI01 402 aa17.56■□□□□ 0.4
PDLIM7-211ENST00000504318 FKBP1BP68106 108 aa17.56■□□□□ 0.4
PDLIM7-211ENST00000504318 MOB2Q70IA6 237 aa17.56■□□□□ 0.4
PDLIM7-211ENST00000504318 MYH13Q9UKX3 1938 aa17.55■□□□□ 0.4
PDLIM7-211ENST00000504318 TRIM27P14373 513 aa17.55■□□□□ 0.4
PDLIM7-211ENST00000504318 NOGQ13253 232 aa17.55■□□□□ 0.4
PDLIM7-211ENST00000504318 METTL24Q5JXM2 366 aa17.55■□□□□ 0.4
PDLIM7-211ENST00000504318 RASAL3Q86YV0 1011 aa17.55■□□□□ 0.4
PDLIM7-211ENST00000504318 TNS4Q8IZW8 715 aa17.55■□□□□ 0.4
PDLIM7-211ENST00000504318 AIDAQ96BJ3 306 aa17.55■□□□□ 0.4
PDLIM7-211ENST00000504318 PRMT6Q96LA8 375 aaPredicted RBP17.55■□□□□ 0.4
PDLIM7-211ENST00000504318 HDAC9Q9UKV0 1011 aa17.55■□□□□ 0.4
PDLIM7-211ENST00000504318 LRRFIP2Q9Y608 721 aaKnown RBP17.55■□□□□ 0.4
PDLIM7-211ENST00000504318 UBTFL1P0CB47 393 aaPredicted RBP17.54■□□□□ 0.4
PDLIM7-211ENST00000504318 CFAP100Q494V2 611 aa17.54■□□□□ 0.4
PDLIM7-211ENST00000504318 MFSD14BQ5SR56 506 aa17.54■□□□□ 0.4
PDLIM7-211ENST00000504318 F8W031 263 aaPredicted RBP17.53■□□□□ 0.4
PDLIM7-211ENST00000504318 BCAMP50895 628 aa17.53■□□□□ 0.4
PDLIM7-211ENST00000504318 APOBEC3FQ8IUX4 373 aaKnown RBP17.53■□□□□ 0.4
PDLIM7-211ENST00000504318 FBXO3Q9UK99 471 aa17.53■□□□□ 0.4
PDLIM7-211ENST00000504318 CASP8AP2Q9UKL3 1982 aa17.53■□□□□ 0.4
PDLIM7-211ENST00000504318 CIAO1O76071 339 aa17.52■□□□□ 0.4
PDLIM7-211ENST00000504318 ZNF157P51786 506 aaPredicted RBP17.52■□□□□ 0.4
PDLIM7-211ENST00000504318 MTX1Q13505 466 aa17.52■□□□□ 0.4
PDLIM7-211ENST00000504318 PUM3Q15397 648 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-211ENST00000504318 DLGAP5Q15398 846 aa17.52■□□□□ 0.4
PDLIM7-211ENST00000504318 CCDC102AQ96A19 550 aa17.52■□□□□ 0.4
PDLIM7-211ENST00000504318 COPRSQ9NQ92 184 aa17.52■□□□□ 0.4
PDLIM7-211ENST00000504318 TSKSQ9UJT2 592 aa17.52■□□□□ 0.4
PDLIM7-211ENST00000504318 IQSEC3Q9UPP2 1182 aaPredicted RBP17.52■□□□□ 0.4
PDLIM7-211ENST00000504318 AKAP11Q9UKA4 1901 aa17.52■□□□□ 0.4
PDLIM7-211ENST00000504318 KIF23Q02241 960 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-211ENST00000504318 ATF7IPQ6VMQ6 1270 aa17.51■□□□□ 0.39
PDLIM7-211ENST00000504318 DEFB129Q9H1M3 183 aa17.51■□□□□ 0.39
PDLIM7-211ENST00000504318 PA2G4Q9UQ80 394 aaKnown RBP17.51■□□□□ 0.39
PDLIM7-211ENST00000504318 OTOFQ9HC10 1997 aa17.51■□□□□ 0.39
PDLIM7-211ENST00000504318 UBE2Q2LH0YL09 131 aa17.5■□□□□ 0.39
PDLIM7-211ENST00000504318 ZBTB22O15209 634 aa17.5■□□□□ 0.39
PDLIM7-211ENST00000504318 HNRNPUQ00839 825 aaKnown RBP eCLIP17.5■□□□□ 0.39
PDLIM7-211ENST00000504318 MAP3K11Q16584 847 aa17.5■□□□□ 0.39
PDLIM7-211ENST00000504318 LDLRAD1Q5T700 205 aa17.5■□□□□ 0.39
PDLIM7-211ENST00000504318 CSRNP1Q96S65 589 aa17.5■□□□□ 0.39
PDLIM7-211ENST00000504318 SERPINA10Q9UK55 444 aa17.5■□□□□ 0.39
PDLIM7-211ENST00000504318 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-211ENST00000504318 CLRN2A0PK11 232 aa17.49■□□□□ 0.39
PDLIM7-211ENST00000504318 CA12O43570 354 aa17.49■□□□□ 0.39
PDLIM7-211ENST00000504318 SPDYE2Q495Y8 402 aa17.49■□□□□ 0.39
PDLIM7-211ENST00000504318 LPIN2Q92539 896 aa17.49■□□□□ 0.39
PDLIM7-211ENST00000504318 TTF2Q9UNY4 1162 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-211ENST00000504318 FZD1Q9UP38 647 aa17.49■□□□□ 0.39
PDLIM7-211ENST00000504318 ZBED9Q6R2W3 1325 aa17.48■□□□□ 0.39
PDLIM7-211ENST00000504318 TEPSINQ96N21 525 aa17.48■□□□□ 0.39
PDLIM7-211ENST00000504318 SIL1Q9H173 461 aa17.48■□□□□ 0.39
PDLIM7-211ENST00000504318 PPP2R3BQ9Y5P8 575 aa17.48■□□□□ 0.39
PDLIM7-211ENST00000504318 IFIT1P09914 478 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-211ENST00000504318 CRKP46108 304 aa17.47■□□□□ 0.39
PDLIM7-211ENST00000504318 HDLBPQ00341 1268 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-211ENST00000504318 CAVIN4Q5BKX8 364 aa17.47■□□□□ 0.39
PDLIM7-211ENST00000504318 CDAN1Q8IWY9 1227 aa17.47■□□□□ 0.39
PDLIM7-211ENST00000504318 DZIP1LQ8IYY4 767 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-211ENST00000504318 MRIQ9BWK5 157 aa17.47■□□□□ 0.39
PDLIM7-211ENST00000504318 SAGE1Q9NXZ1 904 aa17.47■□□□□ 0.39
PDLIM7-211ENST00000504318 ZNF70Q9UC06 446 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-211ENST00000504318 GNAI3P08754 354 aa17.46■□□□□ 0.39
PDLIM7-211ENST00000504318 IL15P40933 162 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-211ENST00000504318 NBPF12Q5TAG4 269 aaPredicted RBP17.46■□□□□ 0.39
PDLIM7-211ENST00000504318 TMEM57Q8N5G2 664 aa17.46■□□□□ 0.39
PDLIM7-211ENST00000504318 TBC1D22AQ8WUA7 517 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms