RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 GRM1Q13255 1194 aa22.55■■□□□ 1.2
SH3TC1-208ENST00000504223 ZBED3Q96IU2 234 aaPredicted RBP22.55■■□□□ 1.2
SH3TC1-208ENST00000504223 GBA2Q9HCG7 927 aaPredicted RBP22.55■■□□□ 1.2
SH3TC1-208ENST00000504223 JAG2Q9Y219 1238 aa22.55■■□□□ 1.2
SH3TC1-208ENST00000504223 AOC2O75106 756 aa22.54■■□□□ 1.2
SH3TC1-208ENST00000504223 HUNKP57058 714 aa22.54■■□□□ 1.2
SH3TC1-208ENST00000504223 METTL24Q5JXM2 366 aa22.54■■□□□ 1.2
SH3TC1-208ENST00000504223 AIDAQ96BJ3 306 aa22.54■■□□□ 1.2
SH3TC1-208ENST00000504223 FAM84BQ96KN1 310 aaPredicted RBP22.54■■□□□ 1.2
SH3TC1-208ENST00000504223 EYA2O00167 538 aa22.53■■□□□ 1.2
SH3TC1-208ENST00000504223 IPO8O15397 1037 aaKnown RBP22.53■■□□□ 1.2
SH3TC1-208ENST00000504223 SASH1O94885 1247 aa22.53■■□□□ 1.2
SH3TC1-208ENST00000504223 MAP2K2P36507 400 aa22.53■■□□□ 1.2
SH3TC1-208ENST00000504223 FKBP1AP62942 108 aaKnown RBP22.53■■□□□ 1.2
SH3TC1-208ENST00000504223 ATG9AQ7Z3C6 839 aa22.53■■□□□ 1.2
SH3TC1-208ENST00000504223 FAM205AQ6ZU69 1335 aa22.53■■□□□ 1.2
SH3TC1-208ENST00000504223 PDE8BO95263 885 aa22.52■■□□□ 1.2
SH3TC1-208ENST00000504223 TMEM57Q8N5G2 664 aa22.52■■□□□ 1.2
SH3TC1-208ENST00000504223 C2orf69Q8N8R5 385 aa22.52■■□□□ 1.2
SH3TC1-208ENST00000504223 TDRD7Q8NHU6 1098 aaKnown RBP22.52■■□□□ 1.2
SH3TC1-208ENST00000504223 HDAC9Q9UKV0 1011 aa22.52■■□□□ 1.2
SH3TC1-208ENST00000504223 SCAF8Q9UPN6 1271 aaKnown RBP22.52■■□□□ 1.2
SH3TC1-208ENST00000504223 PA2G4Q9UQ80 394 aaKnown RBP22.52■■□□□ 1.2
SH3TC1-208ENST00000504223 ARAP2Q8WZ64 1704 aa22.51■■□□□ 1.19
SH3TC1-208ENST00000504223 FGFR2P21802 821 aa22.51■■□□□ 1.19
SH3TC1-208ENST00000504223 HIBADHP31937 336 aaKnown RBP22.51■■□□□ 1.19
SH3TC1-208ENST00000504223 CTCFP49711 727 aaPredicted RBP22.51■■□□□ 1.19
SH3TC1-208ENST00000504223 ZKSCAN2Q63HK3 967 aa22.51■■□□□ 1.19
SH3TC1-208ENST00000504223 FBXO33Q7Z6M2 555 aa22.5■■□□□ 1.19
SH3TC1-208ENST00000504223 MTMR14Q8NCE2 650 aa22.5■■□□□ 1.19
SH3TC1-208ENST00000504223 SIL1Q9H173 461 aa22.5■■□□□ 1.19
SH3TC1-208ENST00000504223 PCDHAC2Q9Y5I4 1007 aa22.5■■□□□ 1.19
SH3TC1-208ENST00000504223 FAM155AB1AL88 458 aaPredicted RBP22.49■■□□□ 1.19
SH3TC1-208ENST00000504223 RLBP1P12271 317 aa22.49■■□□□ 1.19
SH3TC1-208ENST00000504223 RGMBQ6NW40 437 aa22.49■■□□□ 1.19
SH3TC1-208ENST00000504223 PRDM10Q9NQV6 1147 aa22.49■■□□□ 1.19
SH3TC1-208ENST00000504223 HSPA8P11142 646 aaKnown RBP22.48■■□□□ 1.19
SH3TC1-208ENST00000504223 IQSEC3Q9UPP2 1182 aaPredicted RBP22.48■■□□□ 1.19
SH3TC1-208ENST00000504223 F8W031 263 aaPredicted RBP22.47■■□□□ 1.19
SH3TC1-208ENST00000504223 GNAI3P08754 354 aa22.47■■□□□ 1.19
SH3TC1-208ENST00000504223 FKBP1BP68106 108 aa22.47■■□□□ 1.19
SH3TC1-208ENST00000504223 NOGQ13253 232 aa22.47■■□□□ 1.19
SH3TC1-208ENST00000504223 MTX1Q13505 466 aa22.47■■□□□ 1.19
SH3TC1-208ENST00000504223 PRAMEF18Q5VWM3 479 aa22.47■■□□□ 1.19
SH3TC1-208ENST00000504223 TNS4Q8IZW8 715 aa22.47■■□□□ 1.19
SH3TC1-208ENST00000504223 ZIC5Q96T25 663 aa22.47■■□□□ 1.19
SH3TC1-208ENST00000504223 AOX1Q06278 1338 aa22.47■■□□□ 1.19
SH3TC1-208ENST00000504223 PAPPA2Q9BXP8 1791 aa22.47■■□□□ 1.19
SH3TC1-208ENST00000504223 ECM29Q5VYK3 1845 aa22.47■■□□□ 1.19
SH3TC1-208ENST00000504223 CIAO1O76071 339 aa22.46■■□□□ 1.19
SH3TC1-208ENST00000504223 BCAMP50895 628 aa22.46■■□□□ 1.19
SH3TC1-208ENST00000504223 LBX1P52954 281 aa22.46■■□□□ 1.19
SH3TC1-208ENST00000504223 PUM3Q15397 648 aaKnown RBP22.46■■□□□ 1.19
SH3TC1-208ENST00000504223 DLGAP5Q15398 846 aa22.46■■□□□ 1.19
SH3TC1-208ENST00000504223 APOBEC3FQ8IUX4 373 aaKnown RBP22.46■■□□□ 1.19
SH3TC1-208ENST00000504223 COPRSQ9NQ92 184 aa22.46■■□□□ 1.19
SH3TC1-208ENST00000504223 MYH13Q9UKX3 1938 aa22.45■■□□□ 1.18
SH3TC1-208ENST00000504223 SPDYE2BA6NHP3 402 aa22.45■■□□□ 1.18
SH3TC1-208ENST00000504223 SPDYE6P0CI01 402 aa22.45■■□□□ 1.18
SH3TC1-208ENST00000504223 GRIK5Q16478 980 aa22.45■■□□□ 1.18
SH3TC1-208ENST00000504223 CFAP100Q494V2 611 aa22.45■■□□□ 1.18
SH3TC1-208ENST00000504223 MFSD14BQ5SR56 506 aa22.45■■□□□ 1.18
SH3TC1-208ENST00000504223 COL1A1P02452 1464 aaPredicted RBP22.44■■□□□ 1.18
SH3TC1-208ENST00000504223 ZNF157P51786 506 aaPredicted RBP22.44■■□□□ 1.18
SH3TC1-208ENST00000504223 CAVIN4Q5BKX8 364 aa22.44■■□□□ 1.18
SH3TC1-208ENST00000504223 VPS37DQ86XT2 251 aa22.44■■□□□ 1.18
SH3TC1-208ENST00000504223 CCDC102AQ96A19 550 aa22.44■■□□□ 1.18
SH3TC1-208ENST00000504223 FBXO3Q9UK99 471 aa22.44■■□□□ 1.18
SH3TC1-208ENST00000504223 HDAC5Q9UQL6 1122 aa22.44■■□□□ 1.18
SH3TC1-208ENST00000504223 SRGAP3O43295 1099 aa22.43■■□□□ 1.18
SH3TC1-208ENST00000504223 SLC10A3P09131 477 aa22.43■■□□□ 1.18
SH3TC1-208ENST00000504223 MOB2Q70IA6 237 aa22.43■■□□□ 1.18
SH3TC1-208ENST00000504223 PRMT6Q96LA8 375 aaPredicted RBP22.43■■□□□ 1.18
SH3TC1-208ENST00000504223 BEGAINQ9BUH8 593 aa22.43■■□□□ 1.18
SH3TC1-208ENST00000504223 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.43■■□□□ 1.18
SH3TC1-208ENST00000504223 PNMA6EA0A0J9YXQ4 647 aa22.42■■□□□ 1.18
SH3TC1-208ENST00000504223 GNAI2P04899 355 aa22.42■■□□□ 1.18
SH3TC1-208ENST00000504223 DZIP1LQ8IYY4 767 aaKnown RBP22.42■■□□□ 1.18
SH3TC1-208ENST00000504223 LPIN2Q92539 896 aa22.42■■□□□ 1.18
SH3TC1-208ENST00000504223 SERPINA10Q9UK55 444 aa22.42■■□□□ 1.18
SH3TC1-208ENST00000504223 TTF2Q9UNY4 1162 aaKnown RBP22.42■■□□□ 1.18
SH3TC1-208ENST00000504223 IFIT1P09914 478 aaKnown RBP22.41■■□□□ 1.18
SH3TC1-208ENST00000504223 IL15P40933 162 aaPredicted RBP22.41■■□□□ 1.18
SH3TC1-208ENST00000504223 CHAF1AQ13111 956 aaPredicted RBP22.41■■□□□ 1.18
SH3TC1-208ENST00000504223 RASAL3Q86YV0 1011 aa22.41■■□□□ 1.18
SH3TC1-208ENST00000504223 DEFB129Q9H1M3 183 aa22.41■■□□□ 1.18
SH3TC1-208ENST00000504223 CA12O43570 354 aa22.4■■□□□ 1.18
SH3TC1-208ENST00000504223 SLC5A1P13866 664 aa22.4■■□□□ 1.18
SH3TC1-208ENST00000504223 ATP2B3Q16720 1220 aa22.4■■□□□ 1.18
SH3TC1-208ENST00000504223 C1orf115Q9H7X2 142 aa22.4■■□□□ 1.18
SH3TC1-208ENST00000504223 CEP126Q9P2H0 1117 aa22.4■■□□□ 1.18
SH3TC1-208ENST00000504223 SSC5DA1L4H1 1573 aa22.39■■□□□ 1.18
SH3TC1-208ENST00000504223 CLRN2A0PK11 232 aa22.39■■□□□ 1.17
SH3TC1-208ENST00000504223 ADORA1P30542 326 aa22.39■■□□□ 1.17
SH3TC1-208ENST00000504223 KIF23Q02241 960 aaPredicted RBP22.39■■□□□ 1.17
SH3TC1-208ENST00000504223 FTSJ3Q8IY81 847 aaKnown RBP22.39■■□□□ 1.17
SH3TC1-208ENST00000504223 PANK1Q8TE04 598 aa22.39■■□□□ 1.17
SH3TC1-208ENST00000504223 TBC1D22AQ8WUA7 517 aa22.39■■□□□ 1.17
SH3TC1-208ENST00000504223 PPP2R3BQ9Y5P8 575 aa22.39■■□□□ 1.17
SH3TC1-208ENST00000504223 UBE2Q2LH0YL09 131 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms